Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq4483 93.3 4e-14 seq8071 89.7 4e-13 >seq4483 Length=688 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128 ||| | ||| | || || ||| ||| || || || || || |||| || || || | Sbjct 426 GCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 485 Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188 ||| || ||||| ||||| || || || | ||||||||||||| ||| | || ||| || Sbjct 486 GTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 545 Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248 |||| ||| || |||| | | | || ||| ||||||||| || | ||||| Sbjct 546 GTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGAT 605 Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 | | || ||||| || || || || ||||| ||||| Sbjct 606 AGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 641 >seq8071 Length=459 Score = 89.7 bits (98), Expect = 4e-13 Identities = 149/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135 ||||| || || || ||| || || || || || || | ||| || || | || ||| Sbjct 226 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 285 Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195 ||||| ||||| ||||| ||||||||||||||||| | || | || ||| |||||| | Sbjct 286 AGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 345 Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254 || || |||| ||| | | | || ||| ||||| || || | ||||| | || Sbjct 346 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTT 404 Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287 || |||| || || || || |||||||| || Sbjct 405 GCCGGTCAAGGTCTTGACGAAAATTTGCATGTT 437 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429498908259047