Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_029996.1
Length=134272
Score E
Sequences producing significant alignments: (Bits) Value
seq4483 93.3 4e-14
seq8071 89.7 4e-13
>seq4483
Length=688
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/216 (69%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 39069 GCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTC 39128
||| | ||| | || || ||| ||| || || || || || |||| || || || |
Sbjct 426 GCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCGGAGAGGGTGCGGCC 485
Query 39129 GTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTT 39188
||| || ||||| ||||| || || || | ||||||||||||| ||| | || ||| ||
Sbjct 486 GTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGGGGGATGCCCTCCTT 545
Query 39189 GTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGAT 39248
|||| ||| || |||| | | | || ||| ||||||||| || | |||||
Sbjct 546 GTCCTGGATCTTGGTCTTGACATTGTCGATGGTGTCGGACGACTCCACCTCAAGGGTGAT 605
Query 39249 ACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284
| | || ||||| || || || || ||||| |||||
Sbjct 606 AGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCAT 641
>seq8071
Length=459
Score = 89.7 bits (98), Expect = 4e-13
Identities = 149/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 39076 ACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCGTCATCA 39135
||||| || || || ||| || || || || || || | ||| || || | || |||
Sbjct 226 ACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAAAGGGTGCGGCCATCCTCA 285
Query 39136 AGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTGTCCATG 39195
||||| ||||| ||||| ||||||||||||||||| | || | || ||| |||||| |
Sbjct 286 AGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGAATGCCCTCCTTGTCCTGG 345
Query 39196 ATTTTCTGTTTGAGCGTCG-CCACCGTATCGCTCGACTCCACGTCCACCGTGATACTTTT 39254
|| || |||| ||| | | | || ||| ||||| || || | ||||| | ||
Sbjct 346 ATCTTGGACTTGA-CGTTGTCGATGGTGTCGGAAGACTCAACCTCGAGGGTGATGGTCTT 404
Query 39255 TCCCGTCAGCGTTTTAACAAAGATTTGCATCTT 39287
|| |||| || || || || |||||||| ||
Sbjct 405 GCCGGTCAAGGTCTTGACGAAAATTTGCATGTT 437
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 429498908259047
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |