Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_029997.1
Length=105667
Score E
Sequences producing significant alignments: (Bits) Value
seq1626 136 3e-27
seq2811 122 6e-23
seq6788 120 2e-22
seq6248 107 1e-18
seq8630 104 2e-17
seq4483 93.3 3e-14
seq3354 87.8 1e-12
seq5887 84.2 1e-11
>seq1626
Length=97905
Score = 136 bits (150), Expect = 3e-27
Identities = 167/224 (75%), Gaps = 3/224 (1%)
Strand=Plus/Minus
Query 23620 TTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGTT 23679
|||||||| || | || || ||||| |||||||| |||||||| || | ||||| ||
Sbjct 62781 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 62722
Query 23680 GA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTTT 23738
|| ||| | ||| | || | || |||||||||||| | || || || ||||| | ||
Sbjct 62721 GACAATGTCAAATCCAAGA-TTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATT 62663
Query 23739 AATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAAA 23798
|| ||||| || || ||| ||||||||| | || || ||| |||||||| |||||
Sbjct 62662 GATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAA 62603
Query 23799 AGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
|| ||||| ||||||||||| || || ||| |||| || ||||
Sbjct 62602 GGAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGGTATCA 62559
>seq2811
Length=58406
Score = 122 bits (134), Expect = 6e-23
Identities = 166/231 (72%), Gaps = 8/231 (3%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| ||||| || || || || || || || || || ||||| || |
Sbjct 27423 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27364
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | ||| |||||| ||||| |||||| | || |||||||||
Sbjct 27363 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27304
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACG----AACGCACTTTAGGCGATTA 23786
|| | || || |||||||| || ||||||||||||| ||||| | | |||||
Sbjct 27303 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATTA 27248
Query 23787 CAACATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
|||||| || || || || || | || || || || || ||| |||| ||
Sbjct 27247 CAACATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27197
Score = 109 bits (120), Expect = 4e-19
Identities = 145/201 (72%), Gaps = 8/201 (4%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
||||| |||||||| ||||| || || || || || || || || || ||||| || |
Sbjct 27195 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27136
Query 23671 GACACTGTTGAAATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAA 23730
|||||| |||| | | || |||||| ||||| |||||| | || |||||||||
Sbjct 27135 GACACTATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27076
Query 23731 CAGCGTTTAATATTTGCCGGCAAACAACTGGAAGAC----GAACGCACTTTAGGCGATTA 23786
|| | || || |||||||| || |||||||||||| |||||| | | |||||
Sbjct 27075 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCT----GATTA 27020
Query 23787 CAACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 27019 TAACATTCAGAAGGAGTCTAC 26999
Score = 102 bits (112), Expect = 6e-17
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || | || || ||||| || || | || ||||| || |
Sbjct 27651 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTAGAGGTTGAATCTTCC 27592
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || || |||| | |||| || ||||| |||||| | || ||||||||
Sbjct 27591 GACACCATCGACAACGTTAAGTCGAAAA-TTCAAGACAAGGAAGGTATCCCTCCAGATCA 27533
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||| | || || |||||||| || || || ||||||| | || || || |||||
Sbjct 27532 ACAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACCTTGTCTGACTACAA 27473
Query 23790 CATACAAAAAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG 23837
||| ||||| || || || | || || || || || ||| |||| ||
Sbjct 27472 CATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27425
>seq6788
Length=110522
Score = 120 bits (132), Expect = 2e-22
Identities = 164/225 (73%), Gaps = 3/225 (1%)
Strand=Plus/Plus
Query 23619 TTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACGGACACTGT 23678
||| || ||||| | || || || || |||||| | |||||||| || | ||||| |
Sbjct 41181 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41240
Query 23679 TGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCAACAGCGTT 23737
||| ||| | || |||| | || ||||| |||||| | || || || ||||| | |
Sbjct 41241 TGACAATGTCAAGTCAAAGA-TTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGAT 41299
Query 23738 TAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAACATACAAA 23797
|||| ||||| || || ||| ||||||||| | || || || ||||| || ||||
Sbjct 41300 TAATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAA 41359
Query 23798 AAGAGTCCACATTACATTTAGTTTTAAGGTTGCGAGGAGG-ATCA 23841
| || ||||| |||||||||||||| || ||| |||| || ||||
Sbjct 41360 AGGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGGTATCA 41404
>seq6248
Length=918
Score = 107 bits (118), Expect = 1e-18
Identities = 144/198 (73%), Gaps = 2/198 (1%)
Strand=Plus/Plus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || |||||||| || || || ||||||||||| || || || |
Sbjct 131 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAGTCTTCT 190
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || || || || ||||| || || | || ||||| ||
Sbjct 191 GACACCATCGACAATGTCAAGAC-CAAGATCCAGGACAAGGAGGGCATTCCTCCAGACCA 249
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
|||||| || || || |||||||| ||||| || || | || || | ||| |||||
Sbjct 250 ACAGCGCTTGATCTTCGCCGGCAAGCAACTCGAGGATGGTCGTACCCTCTCCGACTACAA 309
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 310 CATCCAGAAGGAGTCCAC 327
>seq8630
Length=306
Score = 104 bits (114), Expect = 2e-17
Identities = 145/201 (72%), Gaps = 2/201 (1%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
|| |||||||| ||||| || || || || || || || ||||| ||||| ||||| ||
Sbjct 105 AATATGCAGATCTTCGTCAAGACTCTGACTGGCAAGACCATCACCCTCGAGGTTGAGTCT 164
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| ||||| | || ||| |||| | || | || ||||| || || | || || ||
Sbjct 165 TCCGACACCATCGACAATGTTAAGAGCAAGA-TTCAGGACAAGGAGGGGATCCCACCTGA 223
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTA 23786
|||||| ||| | || || ||||| || ||||| || || | |||||| | |||||
Sbjct 224 TCAACAACGTCTCATTTTCGCCGGAAAGCAACTCGAGGATGGTCGCACTCTCTCTGATTA 283
Query 23787 CAACATACAAAAAGAGTCCAC 23807
|||||| || || ||||||||
Sbjct 284 CAACATCCAGAAGGAGTCCAC 304
>seq4483
Length=688
Score = 93.3 bits (102), Expect = 3e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||| ||||| || ||||||||||| || || ||||| || || || || || |
Sbjct 641 ATGCAGATCTTCGTCAAGACCCTCACGGGTAAGACTATCACCCTTGAGGTGGAGTCGTCC 582
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | || ||| | || || || || ||||| || || | || || || ||
Sbjct 581 GACACCATCGACAATGTCAAGAC-CAAGATCCAGGACAAGGAGGGCATCCCCCCCGACCA 523
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCACTTTAGGCGATTACAA 23789
||||| || || || || ||||| || || || |||| ||||| | ||| |||||
Sbjct 522 GCAGCGCTTGATCTTCGCAGGCAAGCAGCTCGAGGACGGCCGCACCCTCTCCGACTACAA 463
Query 23790 CATACAAAAAGAGTCCAC 23807
||| || || ||||||||
Sbjct 462 CATCCAGAAGGAGTCCAC 445
>seq3354
Length=695
Score = 87.8 bits (96), Expect = 1e-12
Identities = 142/200 (71%), Gaps = 6/200 (3%)
Strand=Plus/Minus
Query 23611 ATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCCACG 23670
|||||||||||||| || || || ||||| || || || || ||||| || || ||| ||
Sbjct 466 ATGCAGATTTTCGTCAAGACTCTGACGGGTAAGACCATTACCCTCGAGGTGGAGTCCTCG 407
Query 23671 GACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGATCA 23729
||||| | | ||| | || | || ||| ||||| || || | || || || ||
Sbjct 406 GACACCATCAACAATGTCAAGGC-CAAGATTCAGGACAAGGAGGGCATCCCCCCTGACCA 348
Query 23730 ACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGATTAC 23787
||||| | || || |||||||| || || || |||| |||| |||| | || |||
Sbjct 347 GCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTTTCG--GACTAC 290
Query 23788 AACATACAAAAAGAGTCCAC 23807
||||| || || ||||| ||
Sbjct 289 AACATCCAGAAGGAGTCGAC 270
>seq5887
Length=461
Score = 84.2 bits (92), Expect = 1e-11
Identities = 152/218 (70%), Gaps = 6/218 (3%)
Strand=Plus/Plus
Query 23608 AAAATGCAGATTTTCGTTAAAACCCTCACGGGAAAAACGATCACTCTCGAAGTTGACTCC 23667
||||||||||||||||| || ||||| ||||| || || ||||| |||| || || ||
Sbjct 34 AAAATGCAGATTTTCGTGAAGACCCTGACGGGCAAGACCATCACCTTCGAGGTGGAGTCT 93
Query 23668 ACGGACACTGTTGA-AATATTAAAACAAAAAATTGCTGACAAAGAAGGTGTACCGCCAGA 23726
| || || | || ||| | || | || || ||||| ||||| | || || ||
Sbjct 94 TCTGATACCATCGACAATGTCAAGTC-CAAGATCCAGGACAAGGAAGGAATCCCACCCGA 152
Query 23727 TCAACAGCGTTTAATATTTGCCGGCAAACAACTGGAAGACGAACGCA--CTTTAGGCGAT 23784
||| | || || || || || ||||| ||||| || || | |||| |||| | ||
Sbjct 153 CCAATAACGCTTGATCTTCGCTGGCAAGCAACTTGAGGATGGCCGCACCCTTTTG--GAC 210
Query 23785 TACAACATACAAAAAGAGTCCACATTACATTTAGTTTT 23822
|||||||| ||| | || || || ||||| | || ||
Sbjct 211 TACAACATCCAATAGGAATCGACTCTACATCTCGTCTT 248
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 337972858250852
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