Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_030940.1 Length=32637 Score E Sequences producing significant alignments: (Bits) Value seq2743 105 1e-18 >seq2743 Length=508 Score = 105 bits (116), Expect = 1e-18 Identities = 269/407 (66%), Gaps = 2/407 (0%) Strand=Plus/Minus Query 24539 CGGGCAGCGGGTTCAACCTGGCGCCCGGTTACTACGCGATCCTTCCGGTACCGGTCCCCG 24598 ||||| | | || ||| || ||||| || || | | || || ||||| | || || Sbjct 469 CGGGCGGAGCGTACAATCTTGCGCCGGGCTATTTCCGCATTCTGCCGGTGGCCGTGGACG 410 Query 24599 GCATCGTCCAAGTCGTCAACCCGGATGGGTGGCTGACCCAGCCCGGGGCCGACTCGGAGC 24658 | ||| ||| |||| || || |||||||| || ||||| ||| |||| Sbjct 409 GTATCAGCCACGTCGCCAGTGAAGAAAACTGGCTGACGGTACCGGGGGCGGACGAGGAGA 350 Query 24659 CCGACAGCCAGCTGCGCCTGCGCGTGCGCAACCAGTTTTCAGCGGTCAACCAGTACCACA 24718 |||| | |||||||| ||| || || |||||| |||| | ||||| | Sbjct 349 GCGACGACGAGCTGCGCGAACGCTGCCGTAATCAGTTTAATCTGGTCGGAAATTACCATA 290 Query 24719 CCGACGCCGTGTATCGGGCGATGATTTCCGG-GTTCCAGGGCGTGCGCCCGGATGGCGTC 24777 |||| || |||||||| |||||||| |||| ||| | |||| || | || | || Sbjct 289 CCGATGCTGTGTATCGTTCGATGATTGCCGGCGTTGCGGGGC-TGAGTATTGACCGGATC 231 Query 24778 TATTTCGAGCACGGCGCCCCGCGCGGCCCCGGCTCAGCCAATGCGTTCGTGCTGTTCGAC 24837 | || ||||||| ||| |||||||| ||||| | |||||||||| | || | ||| Sbjct 230 TTCTTTGAGCACGACGCGCCGCGCGGACCCGGTACTGCCAATGCGTATCTTTTGCTGGAC 171 Query 24838 GCCGGCGTGCCGGCGGACGAGTACCTGCAGCAGATCAACGCCTACATCCGCGACCAGGGC 24897 ||||||| || | ||| || | || |||||| ||| ||| | ||||| Sbjct 170 AGCGGCGTGGCGTCAGACCCGTTTATTGAGGCCGTCAACGACTATATCAACACGCAGGGG 111 Query 24898 AACCACGGCCACGGCGACGATCTCCAGGTGTTCGTCATGCCCGAGAC 24944 | || ||||||||||| ||| | ||| || | |||||| || || Sbjct 110 CATCATGGCCACGGCGATGATATGCAGTGTTTTGCCATGCCGGAAAC 64 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 104305751481722