Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031043.1 Length=229501 Score E Sequences producing significant alignments: (Bits) Value seq6048 105 1e-17 >seq6048 Length=1429 Score = 105 bits (116), Expect = 1e-17 Identities = 156/219 (71%), Gaps = 4/219 (2%) Strand=Plus/Plus Query 100270 ACATGGCCGTGGGCGACTTCGTCTGGACGGGTGGTGACGTACATCTGTATTCCAACCATC 100329 || ||| ||||| | || |||||||| ||||| || |||||||| |||||| | Sbjct 3 ACTTGGAAGTGGGTGGTTTTGTCTGGACCGGTGGCGATACCCATCTGTACAGCAACCACC 62 Query 100330 TGGAACAGACACGTACTCAGCTAGGACGCACT--CCGCGCACATTACCTAAATTGGTTAT 100387 | || ||||| || ||||| ||||| | |||||| | | || | || |||| Sbjct 63 TAGAGCAGACGCGCCTGCAGCT--GACGCGCGAACCGCGCGCCCTGCCAAGGCTGATTAT 120 Query 100388 CAACCGTAAGCCTGACTCTATCTTCGACTATAAGTTTGAAGACTTCGAGATTGAGGACTA 100447 ||| || ||||| || ||||||||||||||| ||| | ||||||||||| || | || Sbjct 121 CAAGCGCAAGCCGGAGTCTATCTTCGACTATCGCTTTAATGACTTCGAGATCGAAGGTTA 180 Query 100448 CGAGCCTTACCCCGCCATTAAAGCGCCGGTGGCGATATG 100486 ||| || | || | |||||||| ||||| || || || Sbjct 181 CGATCCGCATCCGGTAATTAAAGCCCCGGTCGCCATCTG 219 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 734193337493640