Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_031129.1
Length=103445
Score E
Sequences producing significant alignments: (Bits) Value
seq5246 194 1e-44
>seq5246
Length=461
Score = 194 bits (214), Expect = 1e-44
Identities = 171/211 (81%), Gaps = 2/211 (1%)
Strand=Plus/Plus
Query 38229 TGACATCCTCCACGCCCTTCGGGGTGTGGATTCCTGCTATGTTCAGGCTGTCGCCTGAAT 38288
||||||||||| ||||| | | ||||| || | |||||| | | ||||||||
Sbjct 4 TGACATCCTCCCTGCCCTAAAAGACGGGGATTTCTACAGCGTTCAGACCGAAGCCTGAAT 63
Query 38289 CATTTCGGAGGGTTCCTGCTTCAACGGGCGGTCTGACTGCACCATCCCTCCACAGGCAAG 38348
|| || | ||||||||||||||||||||||||||||||||| ||||||||| |||||||
Sbjct 64 CACCTCAGCGGGTTCCTGCTTCAACGGGCGGTCTGACTGCACTATCCCTCCATAGGCAAG 123
Query 38349 CACGGCGTGCCCCGCCGCTAAAATGTTACGAGCGCCGTTTACATCGGCGTTCGCTGTATA 38408
||||| ||||| |||||||||||||||||||| ||||| | |||||||||| | |||||
Sbjct 124 CACGGTATGCCCTGCCGCTAAAATGTTACGAGCACCGTTAATATCGGCGTTCTCGGTATA 183
Query 38409 TCCACAATCCCGACACACGAATTT-ACTTTG 38438
||| || || | ||| |||||| ||||||
Sbjct 184 TCCGCATTCAAGGCAC-TGAATTTAACTTTG 213
Score = 154 bits (170), Expect = 1e-32
Identities = 192/263 (73%), Gaps = 0/263 (0%)
Strand=Plus/Plus
Query 38806 CTGAATCTGACCTTGCGGCTTAACTGTCGCTGAAGTCTCGCCAGCTTCTTCTGGTTTTTC 38865
|||||| | || |||||||||||||| |||||||| | |||| ||| |||||||
Sbjct 199 CTGAATTTAACTTTGCGGCTTAACTGGCGCTGAAGCATTGCCAACTTGCGCTGGTTTGCT 258
Query 38866 TGAAAACTATTTACAGGTTCAAAGACTGTGCCATCTGACAGCGTGGCGAGTTTAGCCACG 38925
| ||| || || || || | | || |||||||| || ||| | || | ||| | ||
Sbjct 259 TTAAAGCTGTTGACTGGATGGTATACCGTGCCATCAGAAAGCATTGCTAATTTTGTGACT 318
Query 38926 CCAGCATCCAGTCCGACCATTGATGCTGAAGGGTGAACAGGAGTGGATACCTCTCTTTCT 38985
|| |||||||| || ||||| || | | | |||||| | | | ||| || |||
Sbjct 319 CCGGCATCCAGACCAACCATCGACTCGGCATTGTGAACGGCATCAGCTACTTCGTATTCC 378
Query 38986 GTCTGAATACTGATGTACCACTTACCGCAGGACTGGCTGACAGTGACATTTTTCACAACA 39045
||||| ||||||| |||||| || ||| | ||||||||||| ||||| |||||||| |
Sbjct 379 GTCTGGATACTGACGTACCATTTGCCGTATGACTGGCTGACCGTGACGTTTTTCACTTCG 438
Query 39046 CCCGTGACCTGACGGCTATTCCG 39068
|| ||||| | ||||||||| ||
Sbjct 439 CCGGTGACTTCACGGCTATTGCG 461
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 330863231153554
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |