Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031129.1 Length=103445 Score E Sequences producing significant alignments: (Bits) Value seq5246 194 1e-44 >seq5246 Length=461 Score = 194 bits (214), Expect = 1e-44 Identities = 171/211 (81%), Gaps = 2/211 (1%) Strand=Plus/Plus Query 38229 TGACATCCTCCACGCCCTTCGGGGTGTGGATTCCTGCTATGTTCAGGCTGTCGCCTGAAT 38288 ||||||||||| ||||| | | ||||| || | |||||| | | |||||||| Sbjct 4 TGACATCCTCCCTGCCCTAAAAGACGGGGATTTCTACAGCGTTCAGACCGAAGCCTGAAT 63 Query 38289 CATTTCGGAGGGTTCCTGCTTCAACGGGCGGTCTGACTGCACCATCCCTCCACAGGCAAG 38348 || || | ||||||||||||||||||||||||||||||||| ||||||||| ||||||| Sbjct 64 CACCTCAGCGGGTTCCTGCTTCAACGGGCGGTCTGACTGCACTATCCCTCCATAGGCAAG 123 Query 38349 CACGGCGTGCCCCGCCGCTAAAATGTTACGAGCGCCGTTTACATCGGCGTTCGCTGTATA 38408 ||||| ||||| |||||||||||||||||||| ||||| | |||||||||| | ||||| Sbjct 124 CACGGTATGCCCTGCCGCTAAAATGTTACGAGCACCGTTAATATCGGCGTTCTCGGTATA 183 Query 38409 TCCACAATCCCGACACACGAATTT-ACTTTG 38438 ||| || || | ||| |||||| |||||| Sbjct 184 TCCGCATTCAAGGCAC-TGAATTTAACTTTG 213 Score = 154 bits (170), Expect = 1e-32 Identities = 192/263 (73%), Gaps = 0/263 (0%) Strand=Plus/Plus Query 38806 CTGAATCTGACCTTGCGGCTTAACTGTCGCTGAAGTCTCGCCAGCTTCTTCTGGTTTTTC 38865 |||||| | || |||||||||||||| |||||||| | |||| ||| ||||||| Sbjct 199 CTGAATTTAACTTTGCGGCTTAACTGGCGCTGAAGCATTGCCAACTTGCGCTGGTTTGCT 258 Query 38866 TGAAAACTATTTACAGGTTCAAAGACTGTGCCATCTGACAGCGTGGCGAGTTTAGCCACG 38925 | ||| || || || || | | || |||||||| || ||| | || | ||| | || Sbjct 259 TTAAAGCTGTTGACTGGATGGTATACCGTGCCATCAGAAAGCATTGCTAATTTTGTGACT 318 Query 38926 CCAGCATCCAGTCCGACCATTGATGCTGAAGGGTGAACAGGAGTGGATACCTCTCTTTCT 38985 || |||||||| || ||||| || | | | |||||| | | | ||| || ||| Sbjct 319 CCGGCATCCAGACCAACCATCGACTCGGCATTGTGAACGGCATCAGCTACTTCGTATTCC 378 Query 38986 GTCTGAATACTGATGTACCACTTACCGCAGGACTGGCTGACAGTGACATTTTTCACAACA 39045 ||||| ||||||| |||||| || ||| | ||||||||||| ||||| |||||||| | Sbjct 379 GTCTGGATACTGACGTACCATTTGCCGTATGACTGGCTGACCGTGACGTTTTTCACTTCG 438 Query 39046 CCCGTGACCTGACGGCTATTCCG 39068 || ||||| | ||||||||| || Sbjct 439 CCGGTGACTTCACGGCTATTGCG 461 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 330863231153554