Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_031242.1
Length=174307
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 621 4e-173
seq7678 399 2e-106
seq7307 228 9e-55
seq7318 206 3e-48
>seq8857
Length=8770
Score = 621 bits (688), Expect = 4e-173
Identities = 733/987 (74%), Gaps = 4/987 (0%)
Strand=Plus/Minus
Query 163928 TTCTGTAACTGGGTAACTTCAACCGACAATCGTTTGTATGTCGGTTGGTTCGGCGTCCTG 163987
|||||||||||| |||| || || || || | || | || ||||| || || ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 163988 ATGATTCCCTGCCTGCTGG-CAGCGACTACATGT-TTCATCATCGCCTTCATCGGTGCTC 164045
||||| |||| ||| | | | || ||| | ||| || ||||| |||||||| | |||||
Sbjct 6370 ATGAT-CCCTACCTTATTGACCGCAACTTC-TGTATTTATCATAGCCTTCATTGCTGCTC 6313
Query 164046 CTCCTGTGGACATCGATGGCATCCGCGAACCCGTCGCTGGTTCGCTCATGTATGGAAACA 164105
|||| || || || ||||| || || ||||| || |||| || | | || |||||||
Sbjct 6312 CTCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACA 6253
Query 164106 ACATCATCTCTGGTGCTGTTATCCCTTCTTCTAACGCTATCGGTCTGCACTTCTACCCCA 164165
| || ||||| ||||| |||| ||| ||||| ||||||||| ||||||| || || |
Sbjct 6252 ATATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAA 6193
Query 164166 TCTGGGAAGCAGCAAGTCTGGACGAATGGCTCTACAACGGTGGTCCTTTCCAACTCGTTG 164225
| |||||||| ||| | | || |||||| | ||||| |||||||||| | || |||
Sbjct 6192 TATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTG 6133
Query 164226 TGTTCCACTTCCTGATTGGCATCTATGCTTACATGGGTCGTGAGTGGGAACTTTCTTACC 164285
| | |||||| | | || | | |||||||||||||||||||||||| || ||
Sbjct 6132 TTCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCC 6073
Query 164286 GTCTTGGTATGCGTCCTTGGATTTGCGTAGCATACTCTGCTCCTGTCGCTGCAGCGAGTG 164345
|||| |||||||| ||||||||| || || || || |||||||| || || || | ||
Sbjct 6072 GTCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTG 6013
Query 164346 CAGTGTTCCTGGTCTATCCTTTCGGTCAAGGTTCTTTCTCTGATGCAATGCCTCTGGGCA 164405
| || ||| || | || || | |||||||| || ||||||| |||||||| ||||
Sbjct 6012 CTGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCA 5953
Query 164406 TCTCTGGAACCTTCAACTACATGTTGGTCTTCCAGGCTGAGCACAACATCCTCATGCACC 164465
| ||||| || ||||||| ||| | || ||||||||||| ||||||||||| |||||||
Sbjct 5952 TTTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACC 5893
Query 164466 CCTTCCATATGCTCGGCGTAGCAGGTGTGTTTGGCGGTTCTCTGTTCAGTGCAATGCACG 164525
| || || ||| | || ||||| ||||| ||||| || || || || ||||| ||||| |
Sbjct 5892 CATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATG 5833
Query 164526 GTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAACTATG 164585
|||| |||| |||||| || | | || || || |||||||| || || | |
Sbjct 5832 GTTCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773
Query 164586 GTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTACTTTG 164645
||||||| || ||||| || |||||||| || || || || || ||||| ||||| ||||
Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713
Query 164646 GTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 164705
| || |||| |||||||| || ||||||||||| ||||| | || |||||| | |
Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653
Query 164706 CAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGCATTCA 164765
| || ||||| ||| ||||||| |||||||||||| | || |||| || ||||| ||||
Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593
Query 164766 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACA 164825
| | || |||||||| ||||| || || | | ||| |||| |||||||| | || |
Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533
Query 164826 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCGTAATG 164885
|||| || || | | ||||| ||| || || |||||||| ||||| || |||||||
Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473
Query 164886 CTCACAACTTCCCTCTCGACCTTGCTG 164912
|||| ||||||||||| ||||| ||||
Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 399 bits (442), Expect = 2e-106
Identities = 346/429 (81%), Gaps = 0/429 (0%)
Strand=Plus/Minus
Query 164521 GCACGGTTCGCTGGTTACTTCTTCGCTGGTTCGTGAGACCACCGAAAATGAGTCCCAGAA 164580
||||||||| |||||||||| || |||| ||||| ||||| |||| || || || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 164581 CTATGGTTACAAGTTTGGTCAGGAAGAAGAAACCTACAACATCGTTGCCGCTCACGGTTA 164640
||| ||||||||||| || || ||||||||||||||||||||||| || || ||||||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 164641 CTTTGGTCGTCTGATTTTCCAATACGCTTCCTTCAACAACTCCCGTTCGCTGCACTTCTT 164700
||||||||| |||| |||||||||||||||||||||||| |||||| |||||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 164701 CCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTTACTGCTCTGGGCGTTAGCACCATGGC 164760
| | || |||||||| || |||||||||||||||| ||| | || | ||||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 164761 ATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCT 164820
|||||||| ||||| |||||||||||||| || | |||||| ||| ||||| || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 164821 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTGGGCATGGAAGTGATGCACGAGCG 164880
| || ||||| ||||| ||||||| ||| |||| |||||||| |||||||||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 164881 TAATGCTCACAACTTCCCTCTCGACCTTGCTGCTGCTGAGAACACTCCTGTTGCTCTCAA 164940
||| |||||||||||||| | ||| | ||||||| ||| ||||||| ||| | |
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 164941 GGCACCTGC 164949
||||||||
Sbjct 132 TGCACCTGC 124
>seq7307
Length=548
Score = 228 bits (252), Expect = 9e-55
Identities = 333/471 (71%), Gaps = 0/471 (0%)
Strand=Plus/Plus
Query 165699 CACATGATGGGCGTAGCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTT 165758
||||||||||| ||||| ||| | | || ||||| | | | ||||||||| || |
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 165759 ACAGTAGAGAATACTTTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGAT 165818
|||||||| || || || | |||||| |||||| | | || || ||| || || |
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122
Query 165819 AGTACTCAGGAAGAGGAAACTTATTCCATGGTCACTGCTAACCGTTTCTGGTCTCAGATT 165878
|| || | ||| ||||| || |||||||| || || ||||| |||||||| |||||
Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182
Query 165879 TTTGGTATTGCTTTCAGCAATAAGCGTTGGCTTCACTTCTTTATGCTCTTTGTTCCTGTC 165938
|| ||||| || ||| ||| || || ||| | |||||||| ||||| ||||| || |||
Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242
Query 165939 ATGGGACTTTGGACAAGTTCTATTGGTATCATTGGTCTCGCACTCAATCTTCGTGCTTAT 165998
| || | |||| || | || ||| | ||| | ||| | || || || |||||
Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTAGGAATCGTGGGTTTAGCATTGAACCTCCGGGCTTAC 302
Query 165999 GATTTTGTGTCTCAGGAGATTAGAGCTGCTGAGGATCCAGAGTTTGAAACGTTCTATACG 166058
|| || || || || || | | || || || || ||||| |||||||| ||||||||
Sbjct 303 GACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCTATACC 362
Query 166059 AAAAACATCCTCCTTAATGAAGGACTCCGTGCCTGGTTGGCTCCTGTAGACCAACCTCAT 166118
|||||||| | || || || || |||| || ||| |||||||| ||| || |||||
Sbjct 363 AAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGCCTCAC 422
Query 166119 GAGAACTTTGTGTTCCCTGAAGAAGTCTTGCCAAGAGGCAACGCACTTTAA 166169
|| | ||||| ||||| || || || | || | || ||||| || |||
Sbjct 423 GAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAA 473
>seq7318
Length=447
Score = 206 bits (228), Expect = 3e-48
Identities = 252/341 (74%), Gaps = 2/341 (1%)
Strand=Plus/Plus
Query 165534 AATGCTATTGCTTTCTCTGGTCCTATTGCTGTATTCGTTAGTGTTTTTCTTATGTATCCT 165593
||||| || || || |||||||| |||||||| || ||| ||| ||||| || |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 165594 CTGGGACAATCGTCCTGGTTCTTCGCACCGTCGTTCGGGGTCGCAGCAATCTTCCGATTC 165653
||||| || | ||||| || || || || || || ||||| || || || |||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 165654 CTGCTCTTCCTCCAAGGGTTCCATAACTGGACGCTGAATCCCTTTCACATGATGGGCGTA 165713
| || || | |||||||| ||||| ||||| |||| || ||||| |||||||| ||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 165714 GCAGGTATCTTAGGCGGAGCATTGCTTTCTGCCATTCATGGTGTTACAGTAGAGAATACT 165773
|| ||| | || |||| || |||| | || |||||||||| || ||||| ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 165774 TTGTATGAAGATGGTGAACAAGCAAACACTTTCAAAGCATTTGATAGTACTCAGGAAGAG 165833
|| | |||||||||||| ||||| || ||| || ||| | ||||| | ||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 165834 GAAACTTATTCCATGGTCACTGCTAACCG-TTTCTGGTCTC 165873
||||||||||| ||||||||||||||||| ||||| |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 557592228505080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |