Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031761.1 Length=131855 Score E Sequences producing significant alignments: (Bits) Value seq4535 109 5e-19 seq2811 98.7 8e-16 seq6788 93.3 4e-14 seq4029 82.4 6e-11 >seq4535 Length=12927 Score = 109 bits (120), Expect = 5e-19 Identities = 162/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 || ||||||||||| ||||| || || ||||| || || |||||| ||||| ||| | Sbjct 8087 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTGGAAGTTGAATCT 8146 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 || || ||| | | || || || || ||||| ||||| |||| || Sbjct 8147 TCTGACACTATTGACAATGTCAAGTCCAAGATCCAAGACAAGGAAGGTATTCCACCTGAC 8206 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||||| | || | ||| || || |||||||||||| || |||| || |||| || Sbjct 8207 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCCGACTAC 8266 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| |||||||| ||||| || || ||| | || | ||||| Sbjct 8267 AACATCCAAAAGGAATCTACTCTACACTTGGTCTTGAGATTGAGAGGTGG 8316 >seq2811 Length=58406 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| | || || || || || ||| | || ||| | | Sbjct 27423 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27364 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || ||| |||||| ||||| ||||| |||| |||||| Sbjct 27363 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27304 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || || ||| ||||||| || ||| || | ||||| || Sbjct 27303 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTACAAC 27244 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || || |||||||| || || || |||||| | || | ||||| Sbjct 27243 ATTCAGAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 27197 Score = 91.5 bits (100), Expect = 1e-13 Identities = 158/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 111100 ATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGC 111159 ||||||||||| |||||||| | || || || || || ||| | || ||| | | Sbjct 27195 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 27136 Query 111160 GATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAA 111219 || || ||| | | || || |||||| ||||| ||||| |||| |||||| Sbjct 27135 GACACTATTGACAACGTCAAGTCGAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 27076 Query 111220 CAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAAT 111279 ||||| | |||| ||| || || ||| ||||||| || ||| || | |||||||| Sbjct 27075 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACGCTGTCTGATTATAAC 27016 Query 111280 ATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGGCAA 111329 || || || || ||||| || || | |||||| | || | ||||| || Sbjct 27015 ATTCAGAAGGAGTCTACTCTTCACCTTGTGTTGAGATTGAGGGGTGGTAA 26966 >seq6788 Length=110522 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 111108 TTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCCAGCGATTCTGT 111167 |||||||||||| ||||| || || ||||| || ||||| ||| | || | | Sbjct 41181 TTTTGTCAAAACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACCAT 41240 Query 111168 TGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGATCAACAAAGGCT 111227 || | | || || ||| ||| ||||| ||||| |||| || |||||||| | Sbjct 41241 TGACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATTCCTCCTGACCAACAAAGATT 41300 Query 111228 TATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTATAATATACAAAA 111287 || | ||| || || ||||||||||| || ||| || | || || ||||| ||||| Sbjct 41301 AATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAATATCCAAAA 41360 Query 111288 AGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 ||||| || |||||||||| ||| | || | ||||| Sbjct 41361 GGAATCCACTTTACATTTAGTTTTGAGATTGAGAGGTGG 41399 >seq4029 Length=108955 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 111097 AAAATGCAAATTTTTGTCAAAACGTTGACCGGCAAAACCATTACCGTGGAAACGGAACCC 111156 || ||||||||||| ||||| || || ||||| || || |||||| | ||| ||| | Sbjct 14066 AAGATGCAAATTTTCGTCAAGACTTTAACCGGTAAGACTATTACCCTTGAAGTTGAATCT 14125 Query 111157 AGCGATTCTGTTGGCCAGGTAAAACAAAAAATTGCCGACAAAGAAGGCGTTCCCGTCGAT 111216 || || ||| | | || || || ||| ||||| ||||| |||| || Sbjct 14126 TCAGACACTATTGACAATGTCAAGTCTAAGATTCAAGACAAGGAAGGTATTCCACCTGAC 14185 Query 111217 CAACAAAGGCTTATTTATGCGGGCAAACAATTGGAAGATTCTAAAACTATGGCCGATTAT 111276 |||||||| | || | ||| || || ||||||||||| | |||| || | || || Sbjct 14186 CAACAAAGATTGATCTTTGCTGGTAAGCAATTGGAAGACGGCAGAACTTTGTCTGACTAC 14245 Query 111277 AATATACAAAAAGAATCTACACTACATTTAGTGTTGCGTCTGCGCGGTGG 111326 || || ||||| || || || |||| || || ||| | || | ||||| Sbjct 14246 AACATCCAAAAGGAGTCCACTTTACACTTGGTTTTGAGATTGAGAGGTGG 14295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 421765348990744