Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_031935.1
Length=186386
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 616 2e-171
seq7678 399 3e-106
seq7307 262 5e-65
seq7318 221 1e-52
>seq8857
Length=8770
Score = 616 bits (682), Expect = 2e-171
Identities = 732/987 (74%), Gaps = 4/987 (0%)
Strand=Plus/Minus
Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657
|||||||||||| ||||| ||| | || || || || | || ||||| ||||| ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716
||||||||||| | | | || || ||||| || ||| | || ||| | ||||||||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312
Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776
||| || || || || || || |||||||| || |||| || || | || || |||||
Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252
Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836
|| || || ||||| || ||||| ||||| ||||| ||| | ||||| ||||| ||
Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192
Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896
|||||||| || ||| | ||||| ||| | |||||||||||||||| | || || |
Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132
Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956
| |||||| | | ||| | | ||||||||||||||||||||||| || |||
Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072
Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016
|| |||||||| || ||||| ||| || || || ||||| || || || || ||||
Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012
Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076
||| ||| | |||| || | |||||||| || ||||| | |||||| || || ||
Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952
Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136
||| || ||||||| ||| |||| ||||| || || ||||||||||| ||||||||
Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892
Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196
|| |||||||| || || |||||||| |||||||| || || || ||||| ||||| ||
Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832
Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255
||| |||| ||||| | | | | || | ||||| || || || ||| | || | |
Sbjct 5831 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773
Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315
||||||| ||||||||||| ||||| || || || || || |||||||||||||| || |
Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713
Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375
| || ||||||||||||| ||| ||||||||||| ||||| | || |||||| | |
Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653
Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435
| || ||||| ||| ||||||| ||||| |||||| | ||| |||| || ||||| ||||
Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593
Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495
| | || |||||||| ||||| || || | | |||||||| || || | || |
Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533
Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555
|||| || || | | ||||| ||| |||||||||||||| ||||| || |||||||
Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473
Query 178556 CTCACAACTTCCCTCTTGACCTCGCTG 178582
|||| ||||||||||| ||||| ||||
Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 399 bits (442), Expect = 3e-106
Identities = 346/429 (81%), Gaps = 0/429 (0%)
Strand=Plus/Minus
Query 178191 GCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTCAGAA 178250
||||||||| ||||||||||||| |||| ||||||||||| || | |||| || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 178251 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTA 178310
||| |||||||||||||| ||||||||||| |||||||||||||| ||||| || |||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 178311 CTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTT 178370
||| ||||| |||||||||||||||| |||||||||||| |||||| |||||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 178371 CCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGC 178430
| | || |||||||| || ||||||||||||| || ||| | ||| | ||||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 178431 ATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCT 178490
|||||||| ||||| |||||||||||||| || | || ||| ||| || ||| |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 178491 GAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCG 178550
|| ||||| ||||| ||||||| ||| | |||||||||||||||||||||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 178551 TAATGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAAAGCACTCCTGTTGCTCTCAC 178610
||| |||||||||||||| | ||| | ||||||| |||| ||||||| ||| | ||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 178611 CGCACCTGC 178619
||||||||
Sbjct 132 TGCACCTGC 124
>seq7307
Length=548
Score = 262 bits (290), Expect = 5e-65
Identities = 351/483 (73%), Gaps = 10/483 (2%)
Strand=Plus/Plus
Query 179383 TCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTG 179442
||||||||||||| ||||| ||| | || || ||||| | | ||||||||||| || |
Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60
Query 179443 CTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCG 179502
| |||||||| ||||| | ||||||||| |||| ||| || || ||| || |||
Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120
Query 179503 AGCCTACA--CAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCA 179560
| ||||| |||| ||| || ||||| || ||||| || || ||||| |||||||| ||
Sbjct 121 A--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACA 178
Query 179561 GATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCC 179620
||| || |||||||||||| ||| || || ||| |||| ||||| ||| ||||||| ||
Sbjct 179 GATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACC 238
Query 179621 TGTCATGGGTCTTTGGA---CCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677
|||| || | |||| | || || | || || | ||| | ||| | ||||| |
Sbjct 239 AGTCACAGGCTTGTGGATGGCGTC-AG--TAGGAATCGTGGGTTTAGCATTGAACCTCCG 295
Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737
||||| ||||| || || ||||| | | || ||||| || || || || || || ||
Sbjct 296 GGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATT 355
Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797
||||||||| ||||| | |||| || ||| | || ||||||||||| || |||||
Sbjct 356 CTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCA 415
Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATA 179857
|| || ||| | |||||||| || || || || | || | || |||||||| | |||
Sbjct 416 GCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475
Query 179858 TAC 179860
||
Sbjct 476 GAC 478
>seq7318
Length=447
Score = 221 bits (244), Expect = 1e-52
Identities = 255/341 (75%), Gaps = 2/341 (1%)
Strand=Plus/Plus
Query 179220 AATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCT 179279
||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 179280 CTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTC 179339
|| || ||| | ||||| |||||||| ||||| || ||||| || || ||||||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 179340 CTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTA 179399
| || || | || || || || || ||||| | ||||| || || |||||||| ||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 179400 GCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACACA 179459
|| ||| | |||||| || |||| || || ||||||||||| || ||||| || ||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 179460 CTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCGAGCCTACACAAGAAGAG 179519
| |||||||| |||| ||||||||||| ||| || | || || |||| ||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 179520 GAGACCTATTCGATGGTTACTGCCAACCG-TTTCTGGTCTC 179559
|| || ||||| ||||| ||||| ||||| ||||| |||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596240719201040
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