Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031935.1 Length=186386 Score E Sequences producing significant alignments: (Bits) Value seq8857 616 2e-171 seq7678 399 3e-106 seq7307 262 5e-65 seq7318 221 1e-52 >seq8857 Length=8770 Score = 616 bits (682), Expect = 2e-171 Identities = 732/987 (74%), Gaps = 4/987 (0%) Strand=Plus/Minus Query 177598 TTCTGTAACTGGGTAACCTCCACCAACAATCGTCTGTATGTCGGTTGGTTCGGTGTCCTG 177657 |||||||||||| ||||| ||| | || || || || | || ||||| ||||| || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 177658 ATGATCCCTACGCTGCTCGCTGCTGCTATCTGT-TTCATCGTCGCTTTCGTCGCTGCTCC 177716 ||||||||||| | | | || || ||||| || ||| | || ||| | |||||||| Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACT-TCTGTATTTATCATAGCCTTCATTGCTGCTCC 6312 Query 177717 TCCTGTGGACATCGACGGCATCCGTGAACCCGTCGCTGGTTCCCTGATGTATGGCAACAA 177776 ||| || || || || || || |||||||| || |||| || || | || || ||||| Sbjct 6311 TCCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAA 6252 Query 177777 CATCATTTCTGGTGCTGTTGTTCCTTCTTCTAACGCTATTGGTCTCCACTTCTATCCCAT 177836 || || || ||||| || ||||| ||||| ||||| ||| | ||||| ||||| || Sbjct 6251 TATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAAT 6192 Query 177837 CTGGGAAGCAGCTTCTCTCGATGAGTGGCTCTACAATGGTGGTCCTTTCCAACTCGTTAT 177896 |||||||| || ||| | ||||| ||| | |||||||||||||||| | || || | Sbjct 6191 ATGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGT 6132 Query 177897 CTTCCACTTCCTGATCGGTATCTATGCATACATGGGTCGTGAGTGGGAACTTTCTTACCG 177956 | |||||| | | ||| | | ||||||||||||||||||||||| || ||| Sbjct 6131 TCTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCG 6072 Query 177957 CCTAGGTATGCGTCCCTGGATCTGTGTAGCATACTCTGCTCCAGTCGCCGCAGCATCTGC 178016 || |||||||| || ||||| ||| || || || ||||| || || || || |||| Sbjct 6071 TCTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGC 6012 Query 178017 TGTATTCCTTGTTTATCCTTTCGGTCAAGGTTCTTTCTCTGACGCTATGCCCCTGGGTAT 178076 ||| ||| | |||| || | |||||||| || ||||| | |||||| || || || Sbjct 6011 TGTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCAT 5952 Query 178077 CAGTGGCACCTTCAACTACATGCTTGTCTTCCAAGCAGAGCACAACATCCTGATGCACCC 178136 ||| || ||||||| ||| |||| ||||| || || ||||||||||| |||||||| Sbjct 5951 TTCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCC 5892 Query 178137 CTTCCACATGTTGGGCGTCGCTGGTGTCTTTGGTGGTTCTCTGTTCAGTGCGATGCACGG 178196 || |||||||| || || |||||||| |||||||| || || || ||||| ||||| || Sbjct 5891 ATTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGG 5832 Query 178197 TTCTCTGGTTACTTCCTCGCTGGTTC-GTGAAACCACCGAGAACGAAAGTCAGAACTATG 178255 ||| |||| ||||| | | | | || | ||||| || || || ||| | || | | Sbjct 5831 TTCCTTGGTAACTTC-TAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAG 5773 Query 178256 GTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTACTTCG 178315 ||||||| ||||||||||| ||||| || || || || || |||||||||||||| || | Sbjct 5772 GTTACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTG 5713 Query 178316 GTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTTCCTCG 178375 | || ||||||||||||| ||| ||||||||||| ||||| | || |||||| | | Sbjct 5712 GCCGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAG 5653 Query 178376 CAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGCATTCA 178435 | || ||||| ||| ||||||| ||||| |||||| | ||| |||| || ||||| |||| Sbjct 5652 CTGCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCA 5593 Query 178436 ACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCTGAACA 178495 | | || |||||||| ||||| || || | | |||||||| || || | || | Sbjct 5592 ATTTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATA 5533 Query 178496 CCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCGTAATG 178555 |||| || || | | ||||| ||| |||||||||||||| ||||| || ||||||| Sbjct 5532 CCTGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATG 5473 Query 178556 CTCACAACTTCCCTCTTGACCTCGCTG 178582 |||| ||||||||||| ||||| |||| Sbjct 5472 CTCATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 399 bits (442), Expect = 3e-106 Identities = 346/429 (81%), Gaps = 0/429 (0%) Strand=Plus/Minus Query 178191 GCACGGTTCTCTGGTTACTTCCTCGCTGGTTCGTGAAACCACCGAGAACGAAAGTCAGAA 178250 ||||||||| ||||||||||||| |||| ||||||||||| || | |||| || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 178251 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCTGCTCATGGTTA 178310 ||| |||||||||||||| ||||||||||| |||||||||||||| ||||| || ||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 178311 CTTCGGTCGCCTGATCTTCCAATACGCATCCTTCAACAACTCCCGTTCGCTGCACTTCTT 178370 ||| ||||| |||||||||||||||| |||||||||||| |||||| ||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 178371 CCTCGCAGCATGGCCTGTTGTCGGTATCTGGTTCACTGCTCTTGGTGTTAGCACCATGGC 178430 | | || |||||||| || ||||||||||||| || ||| | ||| | ||||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 178431 ATTCAACCTCAACGGTTTCAACTTCAACCAGTCCATCATGGATAGTCAGGGCAAAGTCCT 178490 |||||||| ||||| |||||||||||||| || | || ||| ||| || ||| | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 178491 GAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGTATGGAAGTCATGCACGAGCG 178550 || ||||| ||||| ||||||| ||| | ||||||||||||||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 178551 TAATGCTCACAACTTCCCTCTTGACCTCGCTGCTGCTGAAAGCACTCCTGTTGCTCTCAC 178610 ||| |||||||||||||| | ||| | ||||||| |||| ||||||| ||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 178611 CGCACCTGC 178619 |||||||| Sbjct 132 TGCACCTGC 124 >seq7307 Length=548 Score = 262 bits (290), Expect = 5e-65 Identities = 351/483 (73%), Gaps = 10/483 (2%) Strand=Plus/Plus Query 179383 TCCACATGATGGGTGTAGCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTG 179442 ||||||||||||| ||||| ||| | || || ||||| | | ||||||||||| || | Sbjct 1 TCCACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAG 60 Query 179443 CTACAGTAGAGAACACACTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCG 179502 | |||||||| ||||| | ||||||||| |||| ||| || || ||| || ||| Sbjct 61 CCACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCA 120 Query 179503 AGCCTACA--CAAGAAGAGGAGACCTATTCGATGGTTACTGCCAACCGTTTCTGGTCTCA 179560 | ||||| |||| ||| || ||||| || ||||| || || ||||| |||||||| || Sbjct 121 A--CTACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACA 178 Query 179561 GATCTTTGGTATCGCCTTCAGCAATAAGCGTTGGCTACATTTCTTTATGTTGTTTGTTCC 179620 ||| || |||||||||||| ||| || || ||| |||| ||||| ||| ||||||| || Sbjct 179 GATATTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACC 238 Query 179621 TGTCATGGGTCTTTGGA---CCTCTAGCATTGGTATTATTGGTCTTGCACTTAACCTTAG 179677 |||| || | |||| | || || | || || | ||| | ||| | ||||| | Sbjct 239 AGTCACAGGCTTGTGGATGGCGTC-AG--TAGGAATCGTGGGTTTAGCATTGAACCTCCG 295 Query 179678 AGCTTATGACTTTGTTTCACAAGAGATCAGAGCGGCAGAGGATCCTGAGTTCGAGACGTT 179737 ||||| ||||| || || ||||| | | || ||||| || || || || || || || Sbjct 296 GGCTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATT 355 Query 179738 CTATACCAAGAACATCCTATTGAATGAAGGTCTACGTGCTTGGATGGCACCAGTCGATCA 179797 ||||||||| ||||| | |||| || ||| | || ||||||||||| || ||||| Sbjct 356 CTATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCA 415 Query 179798 ACCACATGAAAACTTTGTATTTCCTGAAGAAGTATTGCCAAGAGGCAACGCTCTGTGATA 179857 || || ||| | |||||||| || || || || | || | || |||||||| | ||| Sbjct 416 GCCTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCTCTAATA 475 Query 179858 TAC 179860 || Sbjct 476 GAC 478 >seq7318 Length=447 Score = 221 bits (244), Expect = 1e-52 Identities = 255/341 (75%), Gaps = 2/341 (1%) Strand=Plus/Plus Query 179220 AATGCAATCGCGTTTTCTGGTCCAATTGCTGTCTTTGTGTCTGTTTTTCTCATGTATCCT 179279 ||||||||||| |||||||||||||||||||| ||||| ||||| ||||| || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 179280 CTCGGACAGTCCTCGTGGTTCTTTGCGCCGTCGTTTGGAGTTGCAGCGATTTTCCGCTTC 179339 || || ||| | ||||| |||||||| ||||| || ||||| || || |||||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 179340 CTACTCTTCCTACAGGGCTTCCACAACTGGACGCTCAACCCGTTCCACATGATGGGTGTA 179399 | || || | || || || || || ||||| | ||||| || || |||||||| || Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 179400 GCAGGTATCCTGGGCGGAGCATTGCTTTGTGCCATTCATGGTGCTACAGTAGAGAACACA 179459 || ||| | |||||| || |||| || || ||||||||||| || ||||| || || Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 179460 CTCTTTGAAGACAGTGACCAATCAAATACATTCAAGGCATTCGAGCCTACACAAGAAGAG 179519 | |||||||| |||| ||||||||||| ||| || | || || |||| || Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 179520 GAGACCTATTCGATGGTTACTGCCAACCG-TTTCTGGTCTC 179559 || || ||||| ||||| ||||| ||||| ||||| ||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCT-GTCTC 340 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596240719201040