Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_031944.1 Length=185102 Score E Sequences producing significant alignments: (Bits) Value seq8857 614 6e-171 seq7678 385 6e-102 seq7307 233 2e-56 seq7318 228 1e-54 >seq8857 Length=8770 Score = 614 bits (680), Expect = 6e-171 Identities = 727/985 (74%), Gaps = 0/985 (0%) Strand=Plus/Minus Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411 |||||||||||| ||||| |||||| ||||| || || | || ||||| || || || Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371 Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471 |||||||| | | || | ||||| || || ||||| |||||||| | |||||| Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCT 6311 Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531 || || || || || || || || ||||| ||| |||| ||| || | || || ||||| Sbjct 6310 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAAT 6251 Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591 || ||||| ||||| || | || |||| || |||||| | ||||| ||||| || Sbjct 6250 ATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATA 6191 Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651 |||||||| ||| | | ||||||||||| ||||| |||||||||| | || |||| Sbjct 6190 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 6131 Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711 | |||||| | | || | | |||||||||||||||||||||| || | ||| Sbjct 6130 CTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGT 6071 Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771 |||||||||||||||||||| |||||| || || ||||| ||||| || || | ||| Sbjct 6070 CTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCT 6011 Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831 |||||| || | ||||| |||| ||||| || ||||| | ||||||||| || || Sbjct 6010 GTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATT 5951 Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891 || || || || |||| ||| | || ||||| ||||| ||||||||||| |||||||| Sbjct 5950 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCA 5891 Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951 || |||||| | ||||| || || || |||||||| || || ||||| || ||||| ||| Sbjct 5890 TTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGT 5831 Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011 | | || ||||| ||| | || | ||||| || || || || || || | ||| Sbjct 5830 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 5771 Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071 ||||| ||||||||||| ||||| || || || || || || ||||| ||||| || || Sbjct 5770 TACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGC 5711 Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131 || ||||||||||||| || ||||||||||| ||||| | || |||||| | || Sbjct 5710 CGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCT 5651 Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191 || ||||| ||| | || || ||||| || ||| | ||| | || ||||| ||||| Sbjct 5650 GCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 5591 Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251 | || |||||||| ||||| || || | | ||| |||| |||||||| | || ||| Sbjct 5590 TTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5531 Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311 || || || | | ||||| ||| ||||| |||||||| ||||| || ||||||||| Sbjct 5530 TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 5471 Query 170312 CACAACTTCCCTCTCGACCTCGCTG 170336 || ||||||||||| ||||| |||| Sbjct 5470 CATAACTTCCCTCTAGACCTAGCTG 5446 >seq7678 Length=557 Score = 385 bits (426), Expect = 6e-102 Identities = 345/433 (80%), Gaps = 0/433 (0%) Strand=Plus/Minus Query 169945 GCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAA 170004 ||||||| | | || ||||| | || ||||||||||| || | ||| || || || Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493 Query 170005 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTA 170064 ||| |||||||||||||| ||||||||||| |||||||||||||| || || |||||||| Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433 Query 170065 CTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTT 170124 ||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373 Query 170125 CCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGC 170184 | | || |||||||| || | || |||||||| |||||| | ||| || ||| ||||| Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313 Query 170185 GTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCT 170244 ||||||||||||||| |||||||||||||| || | |||||| ||| ||||| || | Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253 Query 170245 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 170304 | || ||||| ||||| ||||||| ||| | || |||||||| ||||||||||| Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193 Query 170305 TAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGAGTCCACTCCTGTGGCACTCAC 170364 ||| |||||||||||||| | ||| | ||||||| ||| |||||||||| | || Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133 Query 170365 CGCTCCTGCGATC 170377 || ||||| ||| Sbjct 132 TGCACCTGCAATC 120 >seq7307 Length=548 Score = 233 bits (258), Expect = 2e-56 Identities = 335/472 (71%), Gaps = 10/472 (2%) Strand=Plus/Plus Query 171141 CATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTT 171200 || |||||||| || || ||| | ||||| || || | | | ||| ||||| || | Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62 Query 171201 ACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGAC 171260 |||||||| || || || | |||||| ||||| | | || ||||| || || || Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122 Query 171261 ACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATT 171320 || || | ||||| || || || ||||| || || || || |||||||| ||||| Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182 Query 171321 TTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTC 171380 || |||||||| ||| ||| || || ||||| || ||||| ||||||||||| || ||| Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242 Query 171381 ATGGGTCTTTGG-----GTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGG 171435 | || | ||| ||||||| || || | ||| | || | || || ||| Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTA-----GGAATCGTGGGTTTAGCATTGAACCTCCGGG 297 Query 171436 CTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCT 171495 |||| || |||||| || || | | ||||||||||| ||||| || || || |||| Sbjct 298 CTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCT 357 Query 171496 ATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAAC 171555 ||||||| ||||| | |||| || ||| | || || |||||||| || ||| || | Sbjct 358 ATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGC 417 Query 171556 CACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACT 171607 | || ||| | ||||| ||||||||||| |||||||||||||| || || || Sbjct 418 CTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469 >seq7318 Length=447 Score = 228 bits (252), Expect = 1e-54 Identities = 253/336 (75%), Gaps = 1/336 (0%) Strand=Plus/Plus Query 170976 AATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCT 171035 ||||||||||| || |||||||| || ||||| ||||| || || || || ||||| Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60 Query 171036 CTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTC 171095 || || ||| | ||||||| || || ||| ||||| || ||||| || || |||||| Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120 Query 171096 CTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTT 171155 | || || | ||||| || || || ||||| |||| ||||||||||||||||| ||| Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180 Query 171156 GCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACT 171215 || ||| | | |||| || |||| | || |||||||||| || ||||| |||||| Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240 Query 171216 TTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAA 171275 || | ||||||||||||| ||||| || || ||| ||| || | ||||| | ||| Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300 Query 171276 GAGACATATTCTATGGTCACTGCTAATCG-TTTCTG 171310 || || ||||| |||||||||||||| || |||||| Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 592132377280880