Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_031944.1
Length=185102
Score E
Sequences producing significant alignments: (Bits) Value
seq8857 614 6e-171
seq7678 385 6e-102
seq7307 233 2e-56
seq7318 228 1e-54
>seq8857
Length=8770
Score = 614 bits (680), Expect = 6e-171
Identities = 727/985 (74%), Gaps = 0/985 (0%)
Strand=Plus/Minus
Query 169352 TTCTGTAACTGGGTAACCTCCACTGACAACCGTCTGTATGTCGGTTGGTTCGGCGTCCTG 169411
|||||||||||| ||||| |||||| ||||| || || | || ||||| || || ||
Sbjct 6430 TTCTGTAACTGGATAACCAGCACTGAAAACCGCCTTTACATTGGATGGTTTGGTGTTTTG 6371
Query 169412 ATGATCCCCTGCCTGCTGGCAGCAACCACTTGTTTCATCATCGCCTTCATCGGTGCTCCC 169471
|||||||| | | || | ||||| || || ||||| |||||||| | ||||||
Sbjct 6370 ATGATCCCTACCTTATTGACCGCAACTTCTGTATTTATCATAGCCTTCATTGCTGCTCCT 6311
Query 169472 CCTGTGGACATCGACGGCATCCGCGAACCCGTTGCTGGTTCTCTGATGTATGGTAACAAC 169531
|| || || || || || || || ||||| ||| |||| ||| || | || || |||||
Sbjct 6310 CCAGTAGATATTGATGGTATTCGTGAACCTGTTTCTGGATCTTTGCTTTACGGAAACAAT 6251
Query 169532 ATCATCTCTGGTGCTGTTGTGCCCTCTTCCAACGCAATCGGTCTTCACTTCTATCCCATC 169591
|| ||||| ||||| || | || |||| || |||||| | ||||| ||||| ||
Sbjct 6250 ATTATCTCCGGTGCCATTATTCCTACTTCTGCGGCTATCGGTTTGCACTTTTATCCAATA 6191
Query 169592 TGGGAAGCAGCAAGTCTCGATGAATGGTTGTACAACGGTGGTCCTTTCCAACTGGTTGTC 169651
|||||||| ||| | | ||||||||||| ||||| |||||||||| | || ||||
Sbjct 6190 TGGGAAGCGGCATCTGTTGATGAATGGTTATACAATGGTGGTCCTTATGAGCTAATTGTT 6131
Query 169652 TTCCACTTCCTCATCGGCATCTATGCTTACATGGGTCGTGAGTGGGAATTGTCCTATCGT 169711
| |||||| | | || | | |||||||||||||||||||||| || | |||
Sbjct 6130 CTACACTTCTTACTAGGTGTAGCTTGTTACATGGGTCGTGAGTGGGAACTGAGTTTCCGT 6071
Query 169712 CTGGGTATGCGCCCTTGGATCTGTGTTGCTTACTCTGCTCCCGTTGCGGCAGCCTCCGCT 169771
|||||||||||||||||||| |||||| || || ||||| ||||| || || | |||
Sbjct 6070 CTGGGTATGCGCCCTTGGATTGCTGTTGCGTATTCAGCTCCTGTTGCAGCTGCTACTGCT 6011
Query 169772 GTTTTCCTGGTCTACCCGTTTGGGCAAGGGTCGTTCTCTGACGCTATGCCTCTGGGTATC 169831
|||||| || | ||||| |||| ||||| || ||||| | ||||||||| || ||
Sbjct 6010 GTTTTCTTGATTTACCCAATTGGTCAAGGAAGCTTTTCTGATGGTATGCCTCTAGGCATT 5951
Query 169832 TCGGGAACCTTTAACTACATGCTGGTCTTCCAAGCTGAGCACAACATCCTCATGCACCCC 169891
|| || || || |||| ||| | || ||||| ||||| ||||||||||| ||||||||
Sbjct 5950 TCTGGTACTTTCAACTTTATGATTGTATTCCAGGCTGAACACAACATCCTTATGCACCCA 5891
Query 169892 TTCCACATGCTTGGTGTTGCGGGAGTGTTTGGTGGGTCTCTGTTTAGCGCGATGCACGGT 169951
|| |||||| | ||||| || || || |||||||| || || ||||| || ||||| |||
Sbjct 5890 TTTCACATGTTAGGTGTAGCTGGTGTATTTGGTGGCTCCCTATTTAGTGCTATGCATGGT 5831
Query 169952 AGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAACTATGGT 170011
| | || ||||| ||| | || | ||||| || || || || || || | |||
Sbjct 5830 TCCTTGGTAACTTCTAGTTTGATCAGGGAAACTACAGAAAATGAATCTGCTAATGAAGGT 5771
Query 170012 TACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTACTTCGGT 170071
||||| ||||||||||| ||||| || || || || || || ||||| ||||| || ||
Sbjct 5770 TACAAATTCGGTCAAGAGGAAGAAACTTATAATATTGTAGCTGCTCATGGTTATTTTGGC 5711
Query 170072 CGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTTCCTCGCA 170131
|| ||||||||||||| || ||||||||||| ||||| | || |||||| | ||
Sbjct 5710 CGATTGATCTTCCAATATGCAAGTTTCAACAACTCTCGTTCTTTACATTTCTTCTTAGCT 5651
Query 170132 GCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGCGTTCAAC 170191
|| ||||| ||| | || || ||||| || ||| | ||| | || ||||| |||||
Sbjct 5650 GCTTGGCCCGTTATCGGTATTTGGTTTACTGCTTTAGGTATTAGTACTATGGCTTTCAAT 5591
Query 170192 CTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCTCAACACC 170251
| || |||||||| ||||| || || | | ||| |||| |||||||| | || |||
Sbjct 5590 TTAAATGGTTTCAATTTCAATCAATCTGTAGTTGATAGTCAAGGTCGTGTAATTAATACC 5531
Query 170252 TGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCGTAATGCT 170311
|| || || | | ||||| ||| ||||| |||||||| ||||| || |||||||||
Sbjct 5530 TGAGCTGATATCATTAACCGCGCTAACCTTGGTATGGAAGTTATGCATGAACGTAATGCT 5471
Query 170312 CACAACTTCCCTCTCGACCTCGCTG 170336
|| ||||||||||| ||||| ||||
Sbjct 5470 CATAACTTCCCTCTAGACCTAGCTG 5446
>seq7678
Length=557
Score = 385 bits (426), Expect = 6e-102
Identities = 345/433 (80%), Gaps = 0/433 (0%)
Strand=Plus/Minus
Query 169945 GCACGGTAGCCTCGTCACTTCGAGTCTTGTCCGTGAAACCACCGAGAACGAGTCCCAGAA 170004
||||||| | | || ||||| | || ||||||||||| || | ||| || || ||
Sbjct 552 GCACGGTTCCTTGGTTACTTCCTCCTTGGTACGTGAAACCACAGAAACCGAATCACAAAA 493
Query 170005 CTATGGTTACAAGTTCGGTCAAGAAGAAGAGACCTACAACATCGTTGCCGCTCACGGTTA 170064
||| |||||||||||||| ||||||||||| |||||||||||||| || || ||||||||
Sbjct 492 CTACGGTTACAAGTTCGGACAAGAAGAAGAAACCTACAACATCGTAGCTGCACACGGTTA 433
Query 170065 CTTCGGTCGCCTGATCTTCCAATACGCTTCCTTCAACAACTCCCGTTCACTGCACTTCTT 170124
||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 432 CTTTGGTCGGTTGATCTTCCAATACGCTTCCTTCAACAACAGCCGTTCACTGCACTTCTT 373
Query 170125 CCTCGCAGCATGGCCTGTTGTTGGCATCTGGTTCACCGCTCTTGGTGTCTCCACGATGGC 170184
| | || |||||||| || | || |||||||| |||||| | ||| || ||| |||||
Sbjct 372 CTTGGCTGCATGGCCAGTAATCGGTATCTGGTTTACCGCTTTAGGTATCAGCACAATGGC 313
Query 170185 GTTCAACCTGAACGGTTTCAACTTCAACCAGTCCATCATCGATGGTCAGGGTCGTGTGCT 170244
||||||||||||||| |||||||||||||| || | |||||| ||| ||||| || |
Sbjct 312 GTTCAACCTGAACGGATTCAACTTCAACCAATCAGTAATCGATTCTCAAGGTCGCGTCAT 253
Query 170245 CAACACCTGGGCAGACGTTCTCAACCGTGCTGGTCTTGGCATGGAAGTGATGCACGAGCG 170304
| || ||||| ||||| ||||||| ||| | || |||||||| |||||||||||
Sbjct 252 CGCTACTTGGGCTGACGTAATCAACCGCGCTAACTTGGGTATGGAAGTCATGCACGAGCG 193
Query 170305 TAATGCTCACAACTTCCCTCTCGACCTCGCTGCTGCTGAGTCCACTCCTGTGGCACTCAC 170364
||| |||||||||||||| | ||| | ||||||| ||| |||||||||| | ||
Sbjct 192 TAACGCTCACAACTTCCCCTTAGACTTGGCTGCTGGTGAAGTTGCTCCTGTGGCTTTAAC 133
Query 170365 CGCTCCTGCGATC 170377
|| ||||| |||
Sbjct 132 TGCACCTGCAATC 120
>seq7307
Length=548
Score = 233 bits (258), Expect = 2e-56
Identities = 335/472 (71%), Gaps = 10/472 (2%)
Strand=Plus/Plus
Query 171141 CATATGATGGGTGTTGCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTT 171200
|| |||||||| || || ||| | ||||| || || | | | ||| ||||| || |
Sbjct 3 CACATGATGGGAGTAGCGGGTGTACTCGGTGGAGCGCTATTGTGTGCCATTCACGGAGCC 62
Query 171201 ACAGTAGAGAATACTTTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGAC 171260
|||||||| || || || | |||||| ||||| | | || ||||| || || ||
Sbjct 63 ACAGTAGAAAACACCTTATTTGAAGACGGTGAAGCATCCAAAACCTTCCGCGCCTTCAAC 122
Query 171261 ACGACTCAGGAGGAAGAGACATATTCTATGGTCACTGCTAATCGTTTCTGGTCGCAGATT 171320
|| || | ||||| || || || ||||| || || || || |||||||| |||||
Sbjct 123 TACACCCAAGCAGAAGAAACCTACTCCATGGTGACAGCGAACCGATTCTGGTCACAGATA 182
Query 171321 TTTGGTATCGCGTTCAGCAATAAGCGTTGGTTGCATTTCTTTATGCTGTTTGTTCCTGTC 171380
|| |||||||| ||| ||| || || ||||| || ||||| ||||||||||| || |||
Sbjct 183 TTCGGTATCGCCTTCTCCAACAAACGGTGGTTACACTTCTTCATGCTGTTTGTACCAGTC 242
Query 171381 ATGGGTCTTTGG-----GTCAGTAGTCTGGGGATTATTGGTCTTGCTCTTAATCTTAGGG 171435
| || | ||| ||||||| || || | ||| | || | || || |||
Sbjct 243 ACAGGCTTGTGGATGGCGTCAGTA-----GGAATCGTGGGTTTAGCATTGAACCTCCGGG 297
Query 171436 CTTATGATTTCGTAAGTCAGGAGGTCAGAGCAGCAGAAGATCCAGAGTTCGAGACGTTCT 171495
|||| || |||||| || || | | ||||||||||| ||||| || || || ||||
Sbjct 298 CTTACGACTTCGTATCCCAAGAATTGCGGGCAGCAGAAGACCCAGAATTTGAAACATTCT 357
Query 171496 ATACCAAGAACATCCTATTGAATGAAGGTCTTCGTGCATGGATGGCACCAGTAGACCAAC 171555
||||||| ||||| | |||| || ||| | || || |||||||| || ||| || |
Sbjct 358 ATACCAAAAACATTTTGCTGAACGAGGGTATCCGCGCTTGGATGGCTCCTCAAGATCAGC 417
Query 171556 CACATGAAAACTTTGTGTTCCCAGAGGAAGTTCTACCTCGTGGCAATGCACT 171607
| || ||| | ||||| ||||||||||| |||||||||||||| || || ||
Sbjct 418 CTCACGAACAATTTGTATTCCCAGAGGAGGTTCTACCTCGTGGTAACGCTCT 469
>seq7318
Length=447
Score = 228 bits (252), Expect = 1e-54
Identities = 253/336 (75%), Gaps = 1/336 (0%)
Strand=Plus/Plus
Query 170976 AATGCAATCGCTTTCTCTGGTCCTATCGCTGTGTTTGTCAGCGTGTTCCTCATCTATCCT 171035
||||||||||| || |||||||| || ||||| ||||| || || || || |||||
Sbjct 1 AATGCAATCGCATTTTCTGGTCCAATTGCTGTTTTTGTTTCTGTATTTCTAATTTATCCA 60
Query 171036 CTTGGGCAGTCAAGTTGGTTCTTCGCACCTTCCTTTGGAGTTGCAGCAATCTTCCGCTTC 171095
|| || ||| | ||||||| || || ||| ||||| || ||||| || || ||||||
Sbjct 61 CTGGGTCAGGCTGGTTGGTTTTTTGCGCCTAGTTTTGGTGTAGCAGCTATATTTCGCTTC 120
Query 171096 CTGCTCTTCCTGCAAGGTTTCCACAACTGGACACTGAATCCATTTCATATGATGGGTGTT 171155
| || || | ||||| || || || ||||| |||| ||||||||||||||||| |||
Sbjct 121 ATCCTATTTTTTCAAGGGTTTCATAATTGGACCTTGAACCCATTTCATATGATGGGAGTT 180
Query 171156 GCAGGTATCCTCGGCGGTGCATTGCTTTCTGCAATTCATGGTGTTACAGTAGAGAATACT 171215
|| ||| | | |||| || |||| | || |||||||||| || ||||| ||||||
Sbjct 181 GCCGGTGTATTGGGCGCCGCCCTGCTATGCGCTATTCATGGTGCGACGGTAGAAAATACT 240
Query 171216 TTGTATGAAGATGGTGATCAAGCAAACACCTTTAAGGCATTTGACACGACTCAGGAGGAA 171275
|| | ||||||||||||| ||||| || || ||| ||| || | ||||| | |||
Sbjct 241 TTATTTGAAGATGGTGATGGTGCAAATACATTCCGGGCTTTTAACCCAACTCAAGCTGAA 300
Query 171276 GAGACATATTCTATGGTCACTGCTAATCG-TTTCTG 171310
|| || ||||| |||||||||||||| || ||||||
Sbjct 301 GAAACTTATTCAATGGTCACTGCTAACCGCTTTCTG 336
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592132377280880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |