Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015- 12-30] 8,919 sequences; 28,078,724 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq4483 172 5e-38 seq3354 156 4e-33 seq6248 140 3e-28 seq8071 131 2e-25 seq7783 102 8e-17 seq5887 102 8e-17 seq2811 98.7 9e-16 >seq4483 Length=688 Score = 172 bits (190), Expect = 5e-38 Identities = 179/233 (77%), Gaps = 4/233 (2%) Strand=Plus/Plus Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692 || || || || || || | ||| || || || ||| ||||||||| ||||| |||||| Sbjct 412 CCACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 471 Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752 ||||||||||| |||| |||||||||||||| ||||| |||| |||||| ||||| | | Sbjct 472 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGG 531 Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810 || | || |||||||||| ||| || ||| || | || | |||||| ||||| Sbjct 532 GGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCGGACGACT 589 Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||||||| | || || || |||||||| || ||||| ||||| ||||||||| Sbjct 590 CCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 642 >seq3354 Length=695 Score = 156 bits (172), Expect = 4e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | || || || || || ||||||||| ||||| ||||| || Sbjct 240 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 299 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| |||||||||||||||||||| ||||||||||| ||||| | ||| Sbjct 300 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 359 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || || | || | | ||||| |||||||| Sbjct 360 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCAC 418 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || ||||||||||| ||||| |||||||||||||| Sbjct 419 CTCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGACGAAAATCTGCAT 466 >seq6248 Length=918 Score = 140 bits (154), Expect = 3e-28 Identities = 170/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || | ||| | || || || || ||| ||||||||| ||||| ||||||||| Sbjct 357 CCACCACGCAAACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 298 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || | || ||||| |||||||||||||| |||| |||||||||||| | ||| Sbjct 297 AGGGTACGACCATCCTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGA 238 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | || |||||||||| ||| || ||| || | || | ||||| ||||| | Sbjct 237 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCAGAAGACTCGA 180 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || || || || || ||||| ||||| ||||||||| Sbjct 179 CCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 130 Score = 134 bits (148), Expect = 1e-26 Identities = 171/230 (74%), Gaps = 4/230 (2%) Strand=Plus/Minus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 |||||| || ||||| | ||||| |||| ||| ||||||||| ||||| ||||| || Sbjct 814 GCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGA 755 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||| || ||| | || || |||||||| || || || || || ||||||||||| | || Sbjct 754 GAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGG 695 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812 | | |||||||||| ||| | || | |||| ||| | | | |||||| || ||| Sbjct 694 GATACCCTCCTTGTCC-TGAATCTTGGTCTTC-ACGTTGTCGATAGTGTCTGAAGATTCC 637 Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| | || ||||| || ||||||| ||||| ||||| || ||||| Sbjct 636 ACCTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587 Score = 120 bits (132), Expect = 3e-22 Identities = 165/228 (72%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | ||| | || || || ||||||||||||||| |||||||| Sbjct 585 CCACCACGGAGACGGAGCACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 526 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || || || | || || || ||||| || || || ||||| ||||||||||| | ||| Sbjct 525 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGA 466 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| | || | | ||| | | | ||||||| || || || Sbjct 465 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGATTCAAC 407 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||| | || || || || || || || ||||| ||||| |||||||| Sbjct 406 CTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 359 >seq8071 Length=459 Score = 131 bits (144), Expect = 2e-25 Identities = 169/231 (73%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| || Sbjct 208 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 267 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || |||||||||||||| || || || ||||| ||||| | ||| Sbjct 268 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGA 327 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || |||||||||| ||| || ||| ||| | | | |||||| ||||| || Sbjct 328 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCAAC 386 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 ||| | || || || || || |||| ||||| |||||||| |||||||| Sbjct 387 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCATGTT 437 >seq7783 Length=540 Score = 102 bits (112), Expect = 8e-17 Identities = 159/225 (71%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| || |||| || ||||| ||||||||| ||||| |||||||| Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| |||| ||||||||||| || || || || || ||||| || || | || Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||| | || | || || | ||| | | | ||||| ||||| || Sbjct 104 ATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 46 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTG 41859 ||| | || || || || || || || ||||| || || ||||| Sbjct 45 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1 >seq5887 Length=461 Score = 102 bits (112), Expect = 8e-17 Identities = 163/232 (70%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || |||| || || ||||| || || |||| || ||||| ||||| | Sbjct 263 CCACCACGGAGACAGAAGACGAGATGTAGAGTCGATTCCTATTGGATGTTGTAGTCCAAA 204 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 |||||||| | || || || |||||||| ||||| |||| ||| | |||||| | || Sbjct 203 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGGG 144 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813 | | ||||||||| ||| || ||| || | ||| || || ||||||| Sbjct 143 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATG--GTATCAGAAGACTCCA 86 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865 |||| | || || || || |||||||| ||||| |||||||||||||| || Sbjct 85 CCTCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCATTTT 34 >seq2811 Length=58406 Score = 98.7 bits (108), Expect = 9e-16 Identities = 151/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || || ||||| || ||||| ||||| || | ||| | |||| Sbjct 27440 AACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCT 27499 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || |||||||| ||||| || |||| | ||||| || | || | | |||||||| Sbjct 27500 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 27559 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| | | |||| | | | |||||| || || ||||| | ||||| || Sbjct 27560 -TGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAACCTCTAATGTTATGGT 27618 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 |||||| |||| ||||| |||||||||||||| Sbjct 27619 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651 Score = 93.3 bits (102), Expect = 4e-14 Identities = 150/213 (70%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||| || || || || |||||||||||||||||| || || || || | |||| Sbjct 26984 AACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 27043 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | |||| | ||||||| | Sbjct 27044 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 27102 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| | | ||| | | | ||||||| || || ||||| | ||||| || Sbjct 27103 TTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27162 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || |||||||| ||||| Sbjct 27163 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/213 (69%), Gaps = 2/213 (1%) Strand=Plus/Plus Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710 ||||||| || || || |||||||||||||| || || || || || | |||| Sbjct 27212 AACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 27271 Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770 || || ||||| ||||| || |||| | ||||| || | |||| | ||||||| | Sbjct 27272 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 27330 Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829 ||| |||| || ||| | | | ||||||| || || ||||| | ||||| || Sbjct 27331 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27390 Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 || || || || || || |||||||| ||||| Sbjct 27391 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462252458882800