Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483335.1_202015-
12-30] 8,919 sequences; 28,078,724 total letters
Query= NC_033780.1
Length=144510
Score E
Sequences producing significant alignments: (Bits) Value
seq4483 172 5e-38
seq3354 156 4e-33
seq6248 140 3e-28
seq8071 131 2e-25
seq7783 102 8e-17
seq5887 102 8e-17
seq2811 98.7 9e-16
>seq4483
Length=688
Score = 172 bits (190), Expect = 5e-38
Identities = 179/233 (77%), Gaps = 4/233 (2%)
Strand=Plus/Plus
Query 41633 CCGCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCG 41692
|| || || || || || | ||| || || || ||| ||||||||| ||||| ||||||
Sbjct 412 CCACCACCACGCAGGCGGAGCACGAGGTGAAGGGTGGACTCCTTCTGGATGTTGTAGTCG 471
Query 41693 GAGAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCG 41752
||||||||||| |||| |||||||||||||| ||||| |||| |||||| ||||| | |
Sbjct 472 GAGAGGGTGCGGCCGTCCTCGAGCTGCTTGCCTGCGAAGATCAAGCGCTGCTGGTCGGGG 531
Query 41753 GGAACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACT 41810
|| | || |||||||||| ||| || ||| || | || | |||||| |||||
Sbjct 532 GGGATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCGGACGACT 589
Query 41811 CCACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
||||||| | || || || |||||||| || ||||| ||||| |||||||||
Sbjct 590 CCACCTCAAGGGTGATAGTCTTACCCGTGAGGGTCTTGACGAAGATCTGCATG 642
>seq3354
Length=695
Score = 156 bits (172), Expect = 4e-33
Identities = 173/228 (76%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | || || || || || ||||||||| ||||| ||||| ||
Sbjct 240 CCACCACGCAGACGGAGGACAAGGTGGAGAGTCGACTCCTTCTGGATGTTGTAGTCCGAA 299
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| |||||||||||||||||||| ||||||||||| ||||| | |||
Sbjct 300 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGGTCAGGGGGG 359
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACG-ACACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || || | || | | ||||| ||||||||
Sbjct 360 ATGCCCTCCTTGTCC-TGAATCTTGGCCTTGACATTGTTGATGGTGTCCGAGGACTCCAC 418
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || ||||||||||| ||||| ||||||||||||||
Sbjct 419 CTCGAGGGTAATGGTCTTACCCGTCAGAGTCTTGACGAAAATCTGCAT 466
>seq6248
Length=918
Score = 140 bits (154), Expect = 3e-28
Identities = 170/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || | ||| | || || || || ||| ||||||||| ||||| |||||||||
Sbjct 357 CCACCACGCAAACGGAGGACAAGGTGGAGAGTGGACTCCTTCTGGATGTTGTAGTCGGAG 298
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
||||| || | || ||||| |||||||||||||| |||| |||||||||||| | |||
Sbjct 297 AGGGTACGACCATCCTCGAGTTGCTTGCCGGCGAAGATCAAGCGCTGTTGGTCTGGAGGA 238
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| || |||||||||| ||| || ||| || | || | ||||| ||||| |
Sbjct 237 ATGCCCTCCTTGTCCTGGATCTTGGTCTTGACATTGTCG--ATGGTGTCAGAAGACTCGA 180
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863
|||| | || || || || || || || ||||| ||||| |||||||||
Sbjct 179 CCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAGATCTGCATG 130
Score = 134 bits (148), Expect = 1e-26
Identities = 171/230 (74%), Gaps = 4/230 (2%)
Strand=Plus/Minus
Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694
|||||| || ||||| | ||||| |||| ||| ||||||||| ||||| ||||| ||
Sbjct 814 GCCGCCACGCAGACGCAGCACCAAGTGCAACGTCGACTCCTTCTGGATGTTGTAGTCAGA 755
Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754
||| || ||| | || || |||||||| || || || || || ||||||||||| | ||
Sbjct 754 GAGAGTACGCCCATCCTCCAGCTGCTTTCCTGCAAAGATAAGACGCTGTTGGTCTGGTGG 695
Query 41755 AACGCTCTCCTTGTCCATGATTTTTTG-CTTCAACGACGAC-ACAGTGTCGCTCGACTCC 41812
| | |||||||||| ||| | || | |||| ||| | | | |||||| || |||
Sbjct 694 GATACCCTCCTTGTCC-TGAATCTTGGTCTTC-ACGTTGTCGATAGTGTCTGAAGATTCC 637
Query 41813 ACCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||||| | || ||||| || ||||||| ||||| ||||| || |||||
Sbjct 636 ACCTCGAGTGTAATCGTCTTGCCCGTCAAGGTCTTGACGAAGATTTGCAT 587
Score = 120 bits (132), Expect = 3e-22
Identities = 165/228 (72%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | ||| | || || || ||||||||||||||| ||||||||
Sbjct 585 CCACCACGGAGACGGAGCACAAAGTGGAGGGTAGACTCCTTCTGAATGTTGTAGTCGGAC 526
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| || || | || || || ||||| || || || ||||| ||||||||||| | |||
Sbjct 525 AGAGTACGGCCATCCTCAAGTTGCTTTCCAGCAAAGATCAGACGCTGTTGGTCTGGAGGA 466
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| | || | | ||| | | | ||||||| || || ||
Sbjct 465 ATGCCCTCCTTGTCC-TGAATCTTGGTCTTGACGTTGTCGATAGTGTCGGAGGATTCAAC 407
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
||| | || || || || || || || ||||| ||||| ||||||||
Sbjct 406 CTCGAGTGTGATGGTCTTGCCAGTAAGTGTCTTGACGAAGATCTGCAT 359
>seq8071
Length=459
Score = 131 bits (144), Expect = 2e-25
Identities = 169/231 (73%), Gaps = 2/231 (1%)
Strand=Plus/Plus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| | |||| || || || ||||||||| ||||| ||||| ||
Sbjct 208 CCACCACGAAGACGGAGAACCAAGTGGAGGGTAGACTCCTTCTGGATGTTGTAGTCAGAA 267
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || |||||||||||||| || || || ||||| ||||| | |||
Sbjct 268 AGGGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATAAGACGCTGCTGGTCAGGAGGA 327
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || |||||||||| ||| || ||| ||| | | | |||||| ||||| ||
Sbjct 328 ATGCCCTCCTTGTCCTGGATCTTGGACTT-GACGTTGTCGATGGTGTCGGAAGACTCAAC 386
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
||| | || || || || || |||| ||||| |||||||| ||||||||
Sbjct 387 CTCGAGGGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATTTGCATGTT 437
>seq7783
Length=540
Score = 102 bits (112), Expect = 8e-17
Identities = 159/225 (71%), Gaps = 2/225 (1%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || ||||| || |||| || ||||| ||||||||| ||||| ||||||||
Sbjct 224 CCTCCACGGAGACGCAAAACCAAGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCGGAA 165
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|| ||||| |||| ||||||||||| || || || || || ||||| || || | ||
Sbjct 164 AGAGTGCGGCCGTCCTCGAGCTGCTTTCCTGCAAAGATAAGTCGCTGCTGATCGGGTGGG 105
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814
| || ||||||| | || | || || | ||| | | | ||||| ||||| ||
Sbjct 104 ATGCCTTCCTTGT-CTTGGATCTTGGCCTTGACGTTGTCGATGGTGTCAGAGGACTCGAC 46
Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTG 41859
||| | || || || || || || || ||||| || || |||||
Sbjct 45 CTCGAGGGTGATGGTCTTGCCGGTGAGAGTCTTAACAAAGATCTG 1
>seq5887
Length=461
Score = 102 bits (112), Expect = 8e-17
Identities = 163/232 (70%), Gaps = 4/232 (2%)
Strand=Plus/Minus
Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695
|| || || |||| || || ||||| || || |||| || ||||| ||||| |
Sbjct 263 CCACCACGGAGACAGAAGACGAGATGTAGAGTCGATTCCTATTGGATGTTGTAGTCCAAA 204
Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755
|||||||| | || || || |||||||| ||||| |||| ||| | |||||| | ||
Sbjct 203 AGGGTGCGGCCATCCTCAAGTTGCTTGCCAGCGAAGATCAAGCGTTATTGGTCGGGTGGG 144
Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT--CAACGACGACACAGTGTCGCTCGACTCCA 41813
| | ||||||||| ||| || ||| || | ||| || || |||||||
Sbjct 143 ATTCCTTCCTTGTCCTGGATCTTGGACTTGACATTGTCGATG--GTATCAGAAGACTCCA 86
Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATGTT 41865
|||| | || || || || |||||||| ||||| |||||||||||||| ||
Sbjct 85 CCTCGAAGGTGATGGTCTTGCCCGTCAGGGTCTTCACGAAAATCTGCATTTT 34
>seq2811
Length=58406
Score = 98.7 bits (108), Expect = 9e-16
Identities = 151/213 (71%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || || ||||| || ||||| ||||| || | ||| | ||||
Sbjct 27440 AACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCT 27499
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| |||||||| ||||| || |||| | ||||| || | || | | ||||||||
Sbjct 27500 TCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCT 27559
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | |||| | | | |||||| || || ||||| | ||||| ||
Sbjct 27560 -TGAATTTTCGACTTAACGTTGTCGATGGTGTCGGAAGATTCAACCTCTAATGTTATGGT 27618
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|||||| |||| ||||| ||||||||||||||
Sbjct 27619 TTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 27651
Score = 93.3 bits (102), Expect = 4e-14
Identities = 150/213 (70%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||| || || || || |||||||||||||||||| || || || || | ||||
Sbjct 26984 AACACAAGGTGAAGAGTAGACTCCTTCTGAATGTTATAATCAGACAGCGTTCTACCGTCT 27043
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||| ||||| || |||| | ||||| || | |||| | ||||||| |
Sbjct 27044 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 27102
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| | | ||| | | | ||||||| || || ||||| | ||||| ||
Sbjct 27103 TTGAATTTTCGACTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27162
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || || |||||||| |||||
Sbjct 27163 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27195
Score = 84.2 bits (92), Expect = 2e-11
Identities = 148/213 (69%), Gaps = 2/213 (1%)
Strand=Plus/Plus
Query 41651 AACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAGAGGGTGCGCTCGTCG 41710
||||||| || || || |||||||||||||| || || || || || | ||||
Sbjct 27212 AACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCT 27271
Query 41711 TCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGAACGCTCTCCTTGTCC 41770
|| || ||||| ||||| || |||| | ||||| || | |||| | ||||||| |
Sbjct 27272 TCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGT-C 27330
Query 41771 ATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCACCTCCACCGTTATCGT 41829
||| |||| || ||| | | | ||||||| || || ||||| | ||||| ||
Sbjct 27331 TTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGT 27390
Query 41830 TTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862
|| || || || || || |||||||| |||||
Sbjct 27391 CTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 27423
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 462252458882800
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