Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_000852.5 Length=330611 Score E Sequences producing significant alignments: (Bits) Value seq218 123 5e-23 seq207 87.8 4e-12 >seq218 Length=29701 Score = 123 bits (136), Expect = 5e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| ||||||||||| ||| |||| | ||||| || ||||||||| |||| Sbjct 5319 TCGATATCGTGTTCCATATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5260 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 ||||| || |||| | ||||| || || ||||| || || || || || ||||| ||| Sbjct 5259 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5200 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || || |||| | || | || ||||| || | ||||| ||||| Sbjct 5199 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5140 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| ||||||||||||| ||||| ||| ||||| Sbjct 5139 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5102 >seq207 Length=31172 Score = 87.8 bits (96), Expect = 4e-12 Identities = 150/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872 |||| ||||||||||| ||| | || | |||| || |||||| || |||| Sbjct 5628 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5569 Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932 || || || ||| | ||||| || || ||||| || || || || |||||||| ||| Sbjct 5568 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5509 Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992 || || | | || | ||||| | | | || ||||| || | || || ||||| Sbjct 5508 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5449 Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030 ||||||| |||||| ||||| | ||| | ||| ||||| Sbjct 5448 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5411 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1057695351411960