Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_000852.5
Length=330611
Score E
Sequences producing significant alignments: (Bits) Value
seq218 123 5e-23
seq207 87.8 4e-12
>seq218
Length=29701
Score = 123 bits (136), Expect = 5e-23
Identities = 158/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872
|||| ||||||||||| ||| |||| | ||||| || ||||||||| ||||
Sbjct 5319 TCGATATCGTGTTCCATATAAACAGTGCGACATTCATCCTGAGTGGGGAACCCGTCAACT 5260
Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932
||||| || |||| | ||||| || || ||||| || || || || || ||||| |||
Sbjct 5259 TGGCCATTAGCAATGGATCGCATTAGAGTGGATTTTCCGGCACCATTAGGACCACATAGA 5200
Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992
|| || | | || || |||| | || | || ||||| || | ||||| |||||
Sbjct 5199 CCATATCTCCTACCTCGCTTCAACCTCAATTGAGTCTTGTTTAGTAATATTTTGGCACCA 5140
Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||||| ||||||||||||| ||||| ||| |||||
Sbjct 5139 TATGCCAAGGAAAATTCACAATTACACAAATCTTCACC 5102
>seq207
Length=31172
Score = 87.8 bits (96), Expect = 4e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 319813 TCGAGATCGTGTTCCACGTAAGCAGTTTTCAAAACATCCGCAGAGGGGAACCCTTCAAGC 319872
|||| ||||||||||| ||| | || | |||| || |||||| || ||||
Sbjct 5628 TCGATGTCGTGTTCCACATAAACGGTGCGACATTCATCTTGAGTGGGGAAGCCGTCAACT 5569
Query 319873 TGGCCGTTCACAATAGCGCGCATCAGGGTTGATTTACCCGCCCCGTTTGGCCCACACAGA 319932
|| || || ||| | ||||| || || ||||| || || || || |||||||| |||
Sbjct 5568 TGACCATTGGCAACCGAACGCATTAGAGTGGATTTCCCAGCACCATTAGGCCCACATAGA 5509
Query 319933 CCGTAGCGGTTTCCGCGTTTCAGGTTGAACCGCGTGTTGTTCAGAAGAATTTTTCCACCA 319992
|| || | | || | ||||| | | | || ||||| || | || || |||||
Sbjct 5508 CCATACCTTCTACCCCTTTTCAACCTTAGTTGAGTTTTGTTTAGCAAGATCTTGGCACCA 5449
Query 319993 TATGCCAGAGAAAATTCACAATCACACAGATCCTCACC 320030
||||||| |||||| ||||| | ||| | ||| |||||
Sbjct 5448 TATGCCAAAGAAAACTCACAGTTACATAAATCTTCACC 5411
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1057695351411960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |