Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq312 96.9 4e-15 seq292 96.9 4e-15 >seq312 Length=16270 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/444 (65%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||||| || ||| || || || |||||||| | ||| | |||||| ||| Sbjct 1236 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 1295 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || ||||||||| | |||| || || ||||| || || | ||| || || || Sbjct 1296 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 1355 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || || | ||| || | ||| ||||| || | || || ||| | || ||||| Sbjct 1356 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 1415 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190 || |||||||| | |||| ||||| || | | ||| || || || Sbjct 1416 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 1471 Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247 | ||||| || || || ||| |||| || |||| || | || || |||||||| Sbjct 1472 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAGGTATCGAT 1528 Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307 | | | ||| |||| ||||| || || || || || || || ||||| || | Sbjct 1529 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 1588 Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367 || || | ||||| ||||| | |||| ||| | | ||||| || || || Sbjct 1589 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 1648 Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||||||||| || Sbjct 1649 ACCGTCAGAAGCGGCGAAAAAGGC 1672 >seq292 Length=18136 Score = 96.9 bits (106), Expect = 4e-15 Identities = 290/444 (65%), Gaps = 14/444 (3%) Strand=Plus/Plus Query 16955 AACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAA 17014 |||| || ||||| || ||| || || || |||||||| | ||| | |||||| ||| Sbjct 3369 AACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGTTGGAA 3428 Query 17015 AATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCA 17074 || || || ||||||||| | |||| || || ||||| || || | ||| || || || Sbjct 3429 AAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGGAACCG 3488 Query 17075 GAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCT 17134 || || || | ||| || | ||| ||||| || | || || ||| | || ||||| Sbjct 3489 GAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGGCGTCA 3548 Query 17135 TTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTT----GCTTTATGCAATCCATCGT 17190 || |||||||| | |||| ||||| || | | ||| || || || Sbjct 3549 GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG----GT 3604 Query 17191 TTCTATGGCCTTAAATAAT--TTCTCTTTTTCCTGTAGG-TCGATTATATACGTATCGAT 17247 | ||||| || || || ||| |||| || |||| || | || || |||||||| Sbjct 3605 GTGAATGGCATTGAACAAGAATTCACTTT---CTTTAGGGTCCTTGATGTAGGTATCGAT 3661 Query 17248 GAGTAGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCA 17307 | | | ||| |||| ||||| || || || || || || || ||||| || | Sbjct 3662 CAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAACT 3721 Query 17308 TCGGGCTTCCGCTATTTGAACTTCCACGTAGAATCGTTCCGCTAGATTTTCGTTCACGAT 17367 || || | ||||| ||||| | |||| ||| | | ||||| || || || Sbjct 3722 CTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAAT 3781 Query 17368 GCCGTCGCTCGCGGCGAAAAACGC 17391 ||||| ||||||||||| || Sbjct 3782 ACCGTCAGAAGCGGCGAAAAAGGC 3805 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517484193214560