Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_001350.1
Length=112930
Score E
Sequences producing significant alignments: (Bits) Value
seq170 179 3e-40
>seq170
Length=39039
Score = 179 bits (198), Expect = 3e-40
Identities = 548/837 (65%), Gaps = 45/837 (5%)
Strand=Plus/Plus
Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592
||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || |||
Sbjct 18491 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 18550
Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651
|| ||| ||| ||||||||| | ||| | || || | ||| | || || |
Sbjct 18551 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 18609
Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711
|||| ||| ||| | | || ||| | ||||||||||| ||| ||| | || |
Sbjct 18610 GTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 18669
Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771
|||| || | |||||| || ||||| || ||| | | | || | ||||||||| |
Sbjct 18670 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 18729
Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831
||| || | || ||| ||||||||||| || ||||| ||||||||||| || |
Sbjct 18730 TAGTCAACAAAGCATATGATGCAATGTTAAACGGTACTCCCAACCCCATATCGCAAGAAC 18789
Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864
||| |||| | || ||||| ||| ||| || ||
Sbjct 18790 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 18849
Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924
|||||| || || || | ||| || || ||||| ||||||| || || |
Sbjct 18850 TGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTG 18909
Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983
||||| |||| ||| | || |||||||| |||||| ||||| || | ||| |||
Sbjct 18910 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTAAGTTTATGAATA 18968
Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042
| |||||| ||||| |||| |||| ||| |||| ||| | ||| | || ||||
Sbjct 18969 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 19027
Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102
|| || ||||||||||| ||||||||||| || || || ||||||||| | | || ||
Sbjct 19028 AGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATC 19087
Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162
| || || | ||||||||| || | ||||||||| | |||||||| | || ||
Sbjct 19088 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 19147
Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219
||| | |||| || || ||| ||| || | ||||||||| |||||
Sbjct 19148 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 19204
Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276
| | |||||| ||| || |||| || |||| ||||| || |||| |||
Sbjct 19205 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 19264
Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330
|||||| | || ||| | |||||| ||||| || ||||| |||||||| ||
Sbjct 19265 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 19321
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 361209409106492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |