Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq170 179 3e-40 >seq170 Length=39039 Score = 179 bits (198), Expect = 3e-40 Identities = 548/837 (65%), Gaps = 45/837 (5%) Strand=Plus/Plus Query 101533 TTAAACAGCCATATGCATTTTAATTATAGGGTGTGGGTTATAGTTTTCTAATATAATGTC 101592 ||| ||| ||| | ||||| |||| | || || || ||||| | ||| | | || ||| Sbjct 18491 TTATACACTCATTTTCATTTGAATTCTTGGATGAGGATTATAATCTTCAATTTCAAAGTC 18550 Query 101593 A-TCTGCTTTAAAGTCATCAATGCATGAAACATTTCTAGCAAATCTAAGTGTTGGAAACG 101651 || ||| ||| ||||||||| | ||| | || || | ||| | || || | Sbjct 18551 TGTCAACTTGAAA-TCATCAATGTCTTTAACGTCCCTTTTAATCTTTAGTTTCGGGAATG 18609 Query 101652 GTCTAGGAGTTCGCGTCAACTGCATTTTAAGAGCATCAATGTGATCTACATAGATGTGAG 101711 |||| ||| ||| | | || ||| | ||||||||||| ||| ||| | || | Sbjct 18610 GTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAATGTGGTCTTTATAAACATGTG 18669 Query 101712 CATCTCCTATAGTATGGATAAACTCTCCAGGCACTAGATTAGTGACATGAGCAATCATGC 101771 |||| || | |||||| || ||||| || ||| | | | || | ||||||||| | Sbjct 18670 CATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTCGACAACTTTAGCAATCATTC 18729 Query 101772 AAGTTAAAAGAGAATAGCTAGCAATGTTAAATGGCACTCCTAACCCCATATCAGCTGATC 101831 ||| || | || ||| ||||||||||| || ||||| ||||||||||| || | Sbjct 18730 TAGTCAACAAAGCATATGATGCAATGTTAAACGGTACTCCCAACCCCATATCGCAAGAAC 18789 Query 101832 TTTGATACAGTTGACAGGAAAG-----------------CTT-TCCATC---------AC 101864 ||| |||| | || ||||| ||| ||| || || Sbjct 18790 GTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAAC 18849 Query 101865 AGACATAAAATTGACTTAATACATGACAAGGCGGCAACACCATTTTAGGAATGTCTGAAA 101924 |||||| || || || | ||| || || ||||| ||||||| || || | Sbjct 18850 TGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTG 18909 Query 101925 CATTCCAAGCACACATTAACATCCTTCTATCTGTAGGG-TTTGTTTTTATAGTATCAATC 101983 ||||| |||| ||| | || |||||||| |||||| ||||| || | ||| ||| Sbjct 18910 GGTTCCAGGCACTCATAATGATTCTTCTATC-GTAGGGATTTGTCTTAAGTTTATGAATA 18968 Query 101984 AACTGTTTTAATTGGTCAACTCCTTCTCCTTTATAATCGCGCCCAACACCT-TTATATTC 102042 | |||||| ||||| |||| |||| ||| |||| ||| | ||| | || |||| Sbjct 18969 ACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGTCATCG-CACGTCTTGTATTT 19027 Query 102043 TGCTCCGAAATGCCTCCACTGAAATCCATACACAGGTCCAAGATCTCCTTCATCTCTGTC 102102 || || ||||||||||| ||||||||||| || || || ||||||||| | | || || Sbjct 19028 AGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCCAGATCTCCTACTTTCCTATC 19087 Query 102103 ATAAAAACCAAGTTTATCTAAAAATGATCTAGATCCATTCGCATCCCAAATGTGCACGCC 102162 | || || | ||||||||| || | ||||||||| | |||||||| | || || Sbjct 19088 TTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTACCGTCCCAAATCTTAACACC 19147 Query 102163 -AGCT--GCTGATAGCTCTTTGCTGTCAGTAGATCCTCTGATAAACCACAACAGTTCTTC 102219 ||| | |||| || || ||| ||| || | ||||||||| ||||| Sbjct 19148 TTGCTCAGACAATAG--GTTAGC-GTCTGTATCACCGGCCAAAAACCACAATAGTTCAAG 19204 Query 102220 AACAACACCTCTCCAAAATACTCTCTTAGTAGTTAAAAGTGGAAA---TTCATTTTCTAA 102276 | | |||||| ||| || |||| || |||| ||||| || |||| ||| Sbjct 19205 TATGATACCTCTAGTAAAGACCTTCTTGGTCGTTAGTAGTGGGAAGGTATCATCACGTAA 19264 Query 102277 ACTAAACCTAGACT---GTGTTCCAAAAATACTCAGTGTTCCAGTCCCTGTTCTGTC 102330 |||||| | || ||| | |||||| ||||| || ||||| |||||||| || Sbjct 19265 ACTAAAACGCAGCTGGGGTGGTGCAAAAAGACTCAACGTACCAGTGCCTGTTCTATC 19321 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361209409106492