Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq13 152 6e-32 seq6689 132 6e-26 >seq13 Length=283376 Score = 152 bits (168), Expect = 6e-32 Identities = 228/321 (71%), Gaps = 2/321 (1%) Strand=Plus/Minus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGC 145746 |||| ||||||||| ||||| |||| |||| || | || | | |||||| ||| | Sbjct 138980 GCTCGACGTGGTTGTCGTAGATGTGCACGTCGCCTCCGGTCCAC-ACGAAGTCGCCGACC 138922 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 |||||||| || | ||||||||||| | ||||| | ||| || |||||||| Sbjct 138921 TCGAGGCCGGTCTGCGCGGCGACCATGTGGACGAGCAGCGCGTACGACGCGATGTTGAAC 138862 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 |||||||| || | |||| ||||||||||||| |||||||| |||||| ||| | Sbjct 138861 GGCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAGAGCCGGCCGTCG 138802 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCC 145926 ||||||||||||||| | | |||||| |||||||| |||||| | | ||| | Sbjct 138801 GCCACGTAGAACTGGAAGAACGCGTGGCACGGCGGCAGCGCCATGTCCTCGATCTCCCCG 138742 Query 145927 GGGTTCCAGGCGGTGAGGACGAGCCTCCTGCTCTCGGGGTTCCTCTTGATCTCCCCTATC 145986 |||||| |||| || || | ||| | ||||||||| | |||||| | | ||| Sbjct 138741 ACGTTCCACGCGGAGACGATGTGCCGTCGCGAGTCGGGGTTCGCCCTGATCTGCTCGATC 138682 Query 145987 AGGTCCCTGAGCTGGTCCACG 146007 | | | || |||||| ||| Sbjct 138681 ACCTGCGCGACCTGGTCGACG 138661 >seq6689 Length=433 Score = 132 bits (146), Expect = 6e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 145688 GCTCCACGTGGTTGAGGTAGACGTGCGCGTCCCC-CAGGACGTGGATGAAGTCCCCGGGC 145746 |||| ||||||||| ||||| |||| |||| || | || | | |||||| ||| | Sbjct 339 GCTCGACGTGGTTGTCGTAGATGTGCACGTCGCCTCCGGTCCAC-ACGAAGTCGCCGACC 281 Query 145747 TCGAGGCCCGTGAGGTGGGCGACCATGTAGGTCAGCAGGGAGTAGCTGGCTATGTTGAAG 145806 |||||||| || | ||||||||||| | ||||| | ||| || |||||||| Sbjct 280 TCGAGGCCGGTCTGCGAGGCGACCATGTGGACGAGCAGCGCGTACGACGCGATGTTGAAC 221 Query 145807 GGCACCCCCAGCCCCATGTCCCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCC 145866 |||||||| || | |||| ||||||||||||| |||||||| |||||| ||| | Sbjct 220 GGCACCCCGAGGAAGAGGTCCGCCGAGCGCTGGTAGAGCTGGCACGAGAGCCGGCCGTCG 161 Query 145867 GCCACGTAGAACTGGCACAGGAGGTGGCAGGGCGGCAGGGCCATG 145911 ||| ||||||||||| | | | |||| |||||||| |||||| Sbjct 160 GCCCCGTAGAACTGGAAGAACGCGCGGCACGGCGGCAGCGCCATG 116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590006787387680