Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_001987.1
Length=108409
Score E
Sequences producing significant alignments: (Bits) Value
seq170 154 1e-32
seq10 123 2e-23
>seq170
Length=39039
Score = 154 bits (170), Expect = 1e-32
Identities = 370/560 (66%), Gaps = 31/560 (6%)
Strand=Plus/Plus
Query 96996 AAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCGCGTAAGCTGCTCTGTGAGAGCATCAAT 97055
|| ||||||| | ||||| || || ||| ||| | | || ||| | | ||||||||
Sbjct 18590 AATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGATTTGTTCTTTCAAGGCATCAAT 18649
Query 97056 GTGATTCACATAAATGTGAGCATCTCCTAAAGTGTGAATAAATTCTCCAGGAACTAAATC 97115
||| | ||||| || ||||| || ||||| ||||| || || || || | | ||
Sbjct 18650 GTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACTCACCTGGCTCCATGTC 18709
Query 97116 AGTGACATGGGCGATCATACAAGTTAATAGAGAATAGCTAGCAATGTTAAAAGGCACCCC 97175
|| | || ||||| | ||| || | || ||| ||||||||||| || || ||
Sbjct 18710 GACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAATGTTAAACGGTACTCC 18769
Query 97176 TAGTCCCATATCAGCTGATCTTTGATATAACTGACAGGAAAG-----------------C 97218
| |||||||| || | ||| || || || ||||| |
Sbjct 18770 CAACCCCATATCGCAAGAACGTTGGTACAATAAGCATGAAAGGCGGGGCTTACCGGATCC 18829
Query 97219 TT-TCCATC---------ACACACATAAAACTGACTCAATACATGACAGGGGGGCAACGC 97268
|| ||| || || ||||| ||||| || | ||| || || ||||| ||
Sbjct 18830 TTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAAATATGGCATGGTGGCAAAGC 18889
Query 97269 CATTTTTGGAACATCTAAGACATTCCAAGCACACATCAACATTCTTCTATCGGTTGGGTT 97328
|||||| || ||| ||||| |||| ||| | |||||||||||| || ||
Sbjct 18890 CATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATGATTCTTCTATCGTAGGGATT 18949
Query 97329 TGTGTGTATGGTATTAATTATCTGCTTTAATTGATCAACGCCTTCTCCACCATAATTGTG 97388
||| | | ||| ||| | ||| || |||||||||| |||| |||| ||| | ||
Sbjct 18950 TGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATACCTTGTCCAGTATAGTCGT- 19008
Query 97389 CTTAAGAC--CTTGATATTCTGCTCCAAAATGCCTCCATTGGAATCCATAAACAGGTCCA 97446
| | || |||| |||| || ||||||||||||||||| ||||||||||| || ||
Sbjct 19009 CATCGCACGTCTTG-TATTTAGCACCAAAATGCCTCCATTGAAATCCATAAACGGGCCCC 19067
Query 97447 AGGTCTCCTTCTTCTCTATCACAGAAACCAAGCTTATCTAAATAGGACCTAGATCCATTT 97506
|| |||||| ||| ||||| ||| || | |||||||||||| | |||||||||
Sbjct 19068 AGATCTCCTACTTTCCTATCTTTGAACCCCATCTTATCTAAATATTCACGAGATCCATTA 19127
Query 97507 GCATCCCAAATGTGCACACC 97526
| |||||||| | |||||
Sbjct 19128 CCGTCCCAAATCTTAACACC 19147
>seq10
Length=295215
Score = 123 bits (136), Expect = 2e-23
Identities = 412/640 (64%), Gaps = 41/640 (6%)
Strand=Plus/Plus
Query 96912 CATTTTTATGCTAGGGTAAGGGTTATAGTTTTCCAGAATAATGTCATTTGCT---TTAAA 96968
||||| || || |||| ||| || |||| ||| ||| | || | || |||||
Sbjct 184741 CATTTGGATTCTTGGGTGAGGATTGTAGTCTTC---AATTTCGAAATCTTCTAACTTAAA 184797
Query 96969 ATCATCAATAGATGCAATCTTTCTGGCAAACTTTAGTGTTGGGAAAGGCCTGGGAGTTCG 97028
|||||||| || ||| | || || ||||| | | ||||| || || ||| ||
Sbjct 184798 GTCATCAATTTCTGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCTTGGATCTCT 184857
Query 97029 CGTAAGCTGCTCTGTGAGAGCATCAATGTGATTCACATAAATGTGAGCATCTCCTAAAGT 97088
| || || || | | |||||||| |||| | ||| | || ||||| || |||||
Sbjct 184858 TGAAATTTGTTCATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGT 184917
Query 97089 GTGAATAAATTCTCCAGGAACTAAATCAGTGACATGGGCGATCATACAAGTTAATAGAGA 97148
||||| || || || || | | |||| ||| | || ||||| | ||| | ||| |
Sbjct 184918 ATGAATGAACTCACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGC 184977
Query 97149 ATAGCTAGCAATGTTAAAAGGCACCCCTAGTCCCATATCAGCTGATCTTTGATATAACTG 97208
||| || || ||||| ||||| || || ||||||||| || | ||| || | |
Sbjct 184978 ATATGAGGCGATATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAA 185037
Query 97209 ACAGGAAAG-------------CTT-----TCCATC---------ACACACATAAAACTG 97241
|| ||||| ||| ||| || || |||||||| ||
Sbjct 185038 GCACGAAAGGCGAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTG 185097
Query 97242 ACTCAATACATGACAGGGGGGCAACGCCATTTTTGGAACATCTAAGACATTCCAAGCACA 97301
|| | || || || || || ||||| || || |||| |||||||| |
Sbjct 185098 TGAAAAAATGTGGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCT 185157
Query 97302 CATCAACATTCTTCTATCGGTTGGGTTTGTGTGTATGGTATTAATTATCTGCTTTAATTG 97361
||| | ||||||||||| |||||||| | || | | || | |||||| | ||
Sbjct 185158 CATGATGATTCTTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTG 185217
Query 97362 ATCAACGCCTTCTCCACCATA---ATTGT-GCTTAAGACCTTGATATTCTGCTCCAAAAT 97417
||| | |||| ||| ||| || || || || |||| |||| || |||||||
Sbjct 185218 ATCGATACCTTGTCCGGTATAGTCATCGTCGC---AGGTCTTG-TATTTGGCACCAAAAT 185273
Query 97418 GCCTCCATTGGAATCCATAAACAGGTCCAAGGTCTCCTTCTTCTCTATCACAGAAACCAA 97477
| ||||||||||| ||||||||||| || || || ||| ||| ||||| || || |
Sbjct 185274 GTCTCCATTGGAACCCATAAACAGGACCCAGATCCCCTACTTTCCTATCCATGAGTCCCA 185333
Query 97478 GCTTATCTAAATAGGACCTAGATCCATTTGCATCCCAAAT 97517
||| || ||||| | ||||||||| | ||||||||
Sbjct 185334 TCTTGTCCAAATATTCACGAGATCCATTACCGTCCCAAAT 185373
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 346743882726440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |