Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_002520.1
Length=232392
Score E
Sequences producing significant alignments: (Bits) Value
seq189 113 7e-20
seq56 113 7e-20
seq4 113 7e-20
seq72 107 3e-18
seq90 104 3e-17
seq12 104 3e-17
seq139 102 1e-16
seq8561 98.7 1e-15
seq7730 95.1 2e-14
seq196 89.7 8e-13
>seq189
Length=35770
Score = 113 bits (124), Expect = 7e-20
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| |||| ||||||||| || || || || || ||
Sbjct 27455 CCACCTCTCAATCTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGAC 27514
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || ||||| || |||||||| ||||||||||| || || || |||
Sbjct 27515 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 27574
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| || ||| ||| |||
Sbjct 27575 ATACCTTCCTTGTCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACT 27634
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|| || || || || ||||| ||||| || || | ||| |||||||| ||
Sbjct 27635 TCCAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 27684
>seq56
Length=105907
Score = 113 bits (124), Expect = 7e-20
Identities = 158/230 (69%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| |||||||| || || || || || || || ||
Sbjct 95181 CCACCTCTCAATCTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGAC 95240
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||||| || || ||||| || |||||||| ||||||||||| || || || |||
Sbjct 95241 AAAGTTCTGCCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGA 95300
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| |||||| ||| |||
Sbjct 95301 ATACCTTCCTTGTCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACT 95360
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCATTTT 146280
|| || || || || ||||| ||||| || || | ||| |||||||| ||
Sbjct 95361 TCAAGGGTAATAGTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATCTT 95410
>seq4
Length=403504
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || ||||| || | |||||| || || || ||||| |||||
Sbjct 386760 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 386701
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || | ||| || ||||||||||||| |||||| || || ||||||
Sbjct 386700 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 386641
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 386640 ATACCTTCCTTGTCTTG 386624
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || ||||| || | |||||| || || || ||||| |||||
Sbjct 386988 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 386929
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || | ||| || ||||||||||||| |||||| || || ||||||
Sbjct 386928 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 386869
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 386868 ATACCTTCCTTGTCTTG 386852
Score = 113 bits (124), Expect = 7e-20
Identities = 107/137 (78%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| ||||| || ||||| || | |||||| || || || ||||| |||||
Sbjct 387216 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 387157
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| |||||| | ||| || | ||| || ||||||||||||| |||||| || || ||||||
Sbjct 387156 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 387097
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 387096 ATACCTTCCTTGTCTTG 387080
Score = 102 bits (112), Expect = 1e-16
Identities = 107/138 (78%), Gaps = 2/138 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| ||||||| ||||| || | ||| || || ||| || || ||||| || ||
Sbjct 387444 CCACCTCTTAGTCTTAGGACCAAGTGCAGAGTGGACTCCTTTTGA-ATGTTATAGTCCGA 387386
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| |||||||| || || | ||| || || ||||||||||| || || || ||||||||
Sbjct 387385 CAAAGTTCTGCCGTCTTCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGG 387326
Query 146170 AATTCCTTCTTTATCTTG 146187
||| || |||||||| ||
Sbjct 387325 AATGCCCTCTTTATCCTG 387308
>seq72
Length=89915
Score = 107 bits (118), Expect = 3e-18
Identities = 106/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || |||||||||||||| ||||| || || || || || ||
Sbjct 61340 CCACCTCTTAATCTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGAT 61399
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|||||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 61400 AGAGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 61459
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 61460 ATACCTTCCTTGTCTTG 61476
>seq90
Length=74341
Score = 104 bits (114), Expect = 3e-17
Identities = 151/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
|||||||| | ||| || || ||||||||||| ||||| ||| || || || || || ||
Sbjct 34517 CCACCTCTCAATCTCAAGACTAAATGTAAAGTGGATTCCTTTTGA-ATGTTGTAGTCGGA 34459
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
| ||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 34458 CAAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGG 34399
Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229
|| |||||||| ||||| || || ||| ||| ||
Sbjct 34398 GATACCTTCTTTGTCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAAC 34339
Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAA 146268
|||||| ||||| |||||||| || || || |||| |||
Sbjct 34338 TTCTAGAGTGATGGTTTTACCAGTCAAAGTCTTAACGAA 34300
>seq12
Length=290010
Score = 104 bits (114), Expect = 3e-17
Identities = 105/137 (77%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || ||||||||||| ||||| || ||||| || || ||
Sbjct 42438 CCACCTCTCAATCTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGAC 42379
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || |||||||| || |||||||| || || ||||||
Sbjct 42378 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGA 42319
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 42318 ATACCTTCCTTGTCTTG 42302
>seq139
Length=48224
Score = 102 bits (112), Expect = 1e-16
Identities = 154/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || | ||||||||| || || || || || ||
Sbjct 32710 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 32651
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || | ||| || || ||||||||||||||||| ||||| ||||||
Sbjct 32650 AAGGTTCTACCGTCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGA 32591
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||| || ||| ||| ||
Sbjct 32590 ATACCTTCCTTGTCTTGAATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACC 32531
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || || || || ||||||| ||||| | ||| ||||||||
Sbjct 32530 TCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32484
Score = 96.9 bits (106), Expect = 5e-15
Identities = 155/228 (68%), Gaps = 2/228 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTC-TTTAGATATATTATAATCTGA 146109
||||| || | || || || | || | ||| || || ||| || ||||| || || ||
Sbjct 32938 CCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGA-ATATTGTAGTCCGA 32880
Query 146110 AAGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGG 146169
|| ||||| | ||| |||| ||| || || |||||||||||||||||||| || |||||
Sbjct 32879 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 32820
Query 146170 AATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTAC 146229
||| ||||| || ||||| ||| || ||| ||| ||
Sbjct 32819 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAAC 32760
Query 146230 TTCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT 146277
||||| || || || || ||||||| ||||| | ||| ||||||||
Sbjct 32759 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32712
Score = 91.5 bits (100), Expect = 2e-13
Identities = 158/237 (67%), Gaps = 2/237 (1%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| || |||| || | |||||| || || || || || || ||||| ||
Sbjct 32254 CCACCTCTTAGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGAC 32195
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||| | || |||| || || || ||||| ||||||||||| ||||| |||||
Sbjct 32194 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 32135
Query 146171 ATTCCTTCTTTATCTTGNNNNNNNNNNNNNNNNNNNNNNNNAGTATCTGAACTTTCTACT 146230
|| ||||| || ||||| ||||| ||| ||| |||
Sbjct 32134 ATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACT 32075
Query 146231 TCTAGTGTGATTGTTTTACCTGTTAATGTTTTAATGAATATTTGCAT--TTTATTAG 146285
|| | ||| || |||||||| || || || || | ||| || ||||| | ||||||
Sbjct 32074 TCCAATGTTATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCATAATCTATTAG 32018
>seq8561
Length=249
Score = 98.7 bits (108), Expect = 1e-15
Identities = 104/137 (76%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || | ||||||||| || || || ||||| ||
Sbjct 163 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTCTGAATGTTGTAATCAGAC 104
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
|| ||||| | || |||| || || || ||||| ||||||||||| ||||| |||||
Sbjct 103 AGCGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 44
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 43 ATACCTTCCTTGTCTTG 27
>seq7730
Length=350
Score = 95.1 bits (104), Expect = 2e-14
Identities = 103/137 (75%), Gaps = 0/137 (0%)
Strand=Plus/Minus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || ||||| || | ||||||||| || || || || || ||
Sbjct 207 CCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGAC 148
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || ||||| || || || ||||| ||||||||||| ||||| |||||
Sbjct 147 AAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGG 88
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 87 ATACCTTCCTTGTCTTG 71
>seq196
Length=33893
Score = 89.7 bits (98), Expect = 8e-13
Identities = 102/137 (74%), Gaps = 0/137 (0%)
Strand=Plus/Plus
Query 146051 CCACCTCTAAGTCTTAATACCAAATGTAAAGTAGATTCTTTAGATATATTATAATCTGAA 146110
|||||||| | ||| || || || || ||||| |||||||| || || || || ||
Sbjct 3228 CCACCTCTCAATCTCAAGACTAAGTGCAAAGTGGATTCTTTTTGAATGTTGTAGTCAGAC 3287
Query 146111 AGAGTTCTGCTATCATCTAATTGTTTTCCAGCAAAAATCAATCTTTGCTGATCCGGAGGA 146170
| ||||| | || || ||||| || |||||||| ||||||||||| || || || ||
Sbjct 3288 AAGGTTCTACCGTCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGG 3347
Query 146171 ATTCCTTCTTTATCTTG 146187
|| ||||| || |||||
Sbjct 3348 ATACCTTCCTTGTCTTG 3364
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 743438180592640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |