Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq170 111 1e-19 >seq170 Length=39039 Score = 111 bits (122), Expect = 1e-19 Identities = 196/282 (70%), Gaps = 4/282 (1%) Strand=Plus/Minus Query 20144 AAGGAGTTAAGATTTGGAGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTG 20203 |||| |||||||||||| || |||||||| ||| |||| | | | || || Sbjct 19149 AAGGTGTTAAGATTTGGGACGGTAATGGATCTCGTGAATATTTAGATAAGATGGGGTTCA 19090 Query 20204 ACAACCGTCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAG 20263 | | | ||| || ||| |||| || || ||||||||||||||||| |||||||| | Sbjct 19089 AAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATTTCAATGGAGGCATTTTGGTG 19030 Query 20264 CTGAATATGTTGACAT--GAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAA 20321 || |||| ||| | || || | ||| ||||||||| | |||||||| || | Sbjct 19029 CTAAATA-CAAGACGTGCGATGAC-GACTATACTGGACAAGGTATTGATCAATTGAAACA 18972 Query 20322 TGTTATTAATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAA 20381 |||||| || | |||| || || || |||| |||||||| ||| | | |||||||| Sbjct 18971 GGTTATTCATAAACTTAAGACAAATCCCTACGATAGAAGAATCATTATGAGTGCCTGGAA 18912 Query 20382 CGCTAAAGATGTGCCTTTAATGGCTTTGCCTCCATGTCATAT 20423 | | ||| | |||||||||||| ||||| ||||| Sbjct 18911 CCCAGCTGATTTTGACAAAATGGCTTTGCCACCATGCCATAT 18870 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399137820897940