Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_003083.1
Length=118584
Score E
Sequences producing significant alignments: (Bits) Value
seq189 107 1e-18
seq196 102 6e-17
seq12 93.3 3e-14
seq4 91.5 1e-13
seq139 89.7 4e-13
seq56 89.7 4e-13
seq90 87.8 1e-12
seq7730 84.2 2e-11
>seq189
Length=35770
Score = 107 bits (118), Expect = 1e-18
Identities = 151/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| || || ||||| ||||| ||||||||||||| || ||| ||| |||||||
Sbjct 27473 ACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCATCTTCC 27532
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| ||
Sbjct 27533 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGG 27592
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| ||||||| | || ||| | ||| || | ||
Sbjct 27593 ATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATAGTCTTA 27652
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 27653 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 27684
>seq196
Length=33893
Score = 102 bits (112), Expect = 6e-17
Identities = 136/189 (72%), Gaps = 0/189 (0%)
Strand=Plus/Plus
Query 18129 GTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAATTGTTTGCCC 18188
|| ||||||||||||||||||||||| | || ||| ||| ||||||||||| || ||
Sbjct 3258 GTGGATTCTTTTTGAATGTTGTAGTCAGACAAGGTTCTACCGTCTTCCAATTGCTTACCA 3317
Query 18189 GCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATTTGTTGCTTG 18248
||| |||| | ||||||||| || || | |||||||| || ||| | | ||||
Sbjct 3318 GCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTGTCTTGAATCTTTGACTTG 3377
Query 18249 ACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCGGTCAATGTT 18308
|| | ||| ||||||| | || ||| | |||||| | || || ||||| ||
Sbjct 3378 ACATTGTCAATAGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCAGTCAAAGTC 3437
Query 18309 TTTACAAAA 18317
|| ||||||
Sbjct 3438 TTGACAAAA 3446
>seq12
Length=290010
Score = 93.3 bits (102), Expect = 3e-14
Identities = 140/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||| || |||||||| | || ||| ||| |||||||||
Sbjct 42415 ATGTAAAGTG--GATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCGTCTTCCAAT 42358
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCAATT 18239
|| || || ||| |||| | ||||||||| || || | |||||||| || |||
Sbjct 42357 TGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTGTCTTGAATC 42298
Query 18240 TGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTGCCG 18299
| | |||||| | ||| |||||| | || ||| | |||||| | || ||
Sbjct 42297 TTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATGGTCTTACCA 42238
Query 18300 GTCAATGTTTTTACAAAA 18317
||||| ||||| ||||||
Sbjct 42237 GTCAAAGTTTTGACAAAA 42220
>seq4
Length=403504
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| |||||| || || || ||||| ||||| ||||| | || ||| ||
Sbjct 386979 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTA 386920
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| |||| ||| || || ||| | || ||||||||||| || || | ||||||
Sbjct 386919 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCC 386860
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
|| || ||| | |||||| | | | |||||| | |||| || | |||
Sbjct 386859 TTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTT 386800
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || || |||| ||| || || || ||||||||
Sbjct 386799 ATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386762
Score = 91.5 bits (100), Expect = 1e-13
Identities = 151/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| |||||| || || || ||||| ||||| ||||| | || ||| ||
Sbjct 387207 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTA 387148
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| |||| ||| || || ||| | || ||||||||||| || || | ||||||
Sbjct 387147 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCC 387088
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
|| || ||| | |||||| | | | |||||| | |||| || | |||
Sbjct 387087 TTGTCTTGAATCTTGGACTTGACGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAGGTT 387028
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || || |||| ||| || || || ||||||||
Sbjct 387027 ATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386990
Score = 87.8 bits (96), Expect = 1e-12
Identities = 150/218 (69%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 18108 AGTCTAAGTACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTA 18167
||||| | |||| |||||| || || || ||||| ||||| ||||| | || ||| ||
Sbjct 386751 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGACAAAGTTCTA 386692
Query 18168 CAATCTTCCAATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCC 18227
| ||| |||| ||| || || ||| | || ||||||||||| || || | ||||||
Sbjct 386691 CCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTTCC 386632
Query 18228 TTATCGGCAATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTG 18287
|| || ||| | |||||| | | | ||||| || |||| || | ||
Sbjct 386631 TTGTCTTGAATCTTGGACTTGACGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAAGTA 386572
Query 18288 ATGCTTTTGCCGGTCAATGTTTTTACAAAAATTTGCAT 18325
||| | || || ||||| || || || ||||| |||||
Sbjct 386571 ATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386534
>seq139
Length=48224
Score = 89.7 bits (98), Expect = 4e-13
Identities = 145/209 (69%), Gaps = 0/209 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| ||||||
Sbjct 32692 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCC 32633
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
| ||| || || ||| | || | |||||||||||| || | |||||||| || |
Sbjct 32632 AGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTGTCTTGA 32573
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|||| ||||| | ||| |||||| | || || | ||| || | ||
Sbjct 32572 ATTTTACTTTTGACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTC 32513
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCAT 18325
|| || | ||||| || |||||||||||
Sbjct 32512 CCTGTTAGAGTTTTGACGAAAATTTGCAT 32484
>seq56
Length=105907
Score = 89.7 bits (98), Expect = 4e-13
Identities = 147/212 (69%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| ||| | || || || ||||| ||||||||||| | || ||| | | ||||||
Sbjct 95199 ACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCGTCTTCC 95258
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
||||| || || ||| |||| | ||||||||| || || | |||||||| || |
Sbjct 95259 AATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTGTCTTGA 95318
Query 18237 ATTTGTTGCTTGACCTGTGCAACAGTGTCACCGGGCTCGGTTTCAATGGTGATGCTTTTG 18296
|| | |||||| | ||| |||||| | || ||||| ||| || | ||
Sbjct 95319 ATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATAGTCTTA 95378
Query 18297 CCGGTCAATGTTTTTACAAAAATTTGCATTTT 18328
||||| || || || || ||||||||||| ||
Sbjct 95379 CCGGTTAAAGTCTTGACGAAAATTTGCATCTT 95410
>seq90
Length=74341
Score = 87.8 bits (96), Expect = 1e-12
Identities = 75/92 (82%), Gaps = 2/92 (2%)
Strand=Plus/Minus
Query 18120 ATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCCAAT 18179
|||| ||||| ||||| ||||||||||||||||||| || ||| ||| |||||||||
Sbjct 34494 ATGTAAAGTG--GATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCGTCTTCCAAT 34437
Query 18180 TGTTTGCCCGCATAGATAAGTCTTTGTTGATC 18211
|| || || ||| |||| | ||||||||| ||
Sbjct 34436 TGCTTACCAGCAAAGATCAATCTTTGTTGGTC 34405
>seq7730
Length=350
Score = 84.2 bits (92), Expect = 2e-11
Identities = 93/124 (75%), Gaps = 0/124 (0%)
Strand=Plus/Minus
Query 18117 ACCATGTGAAGTGTTGATTCTTTTTGAATGTTGTAGTCGGCCATTGTTTTACAATCTTCC 18176
|||| |||||| || ||||| ||||| ||||||||||| | || ||| ||| |||||
Sbjct 189 ACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCGTCTTCT 130
Query 18177 AATTGTTTGCCCGCATAGATAAGTCTTTGTTGATCCACGGGCACGCCTTCCTTATCGGCA 18236
|| || || || ||| |||| | |||||||||||| || | |||||||| || |
Sbjct 129 AACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTGA 70
Query 18237 ATTT 18240
||||
Sbjct 69 ATTT 66
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 379300116063540
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