Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq170 134 3e-26
seq312 129 1e-24
seq292 129 1e-24
seq12 84.2 4e-11
>seq170
Length=39039
Score = 134 bits (148), Expect = 3e-26
Identities = 229/327 (70%), Gaps = 4/327 (1%)
Strand=Plus/Minus
Query 35295 ATACAGACGCCAAAGAATTGGCCAAG-AAGAAGATACACATCTGGAACGCTAATGGGTCG 35353
|||||||||| || |||| | || ||| | || | || ||| ||| |||||| ||
Sbjct 19176 ATACAGACGCTAACCTATTGTCTGAGCAAGGTGTTA-AGATTTGGGACGGTAATGGATCT 19118
Query 35354 CGGGAATTTTTGGACAGTAGAGGGTTATACGATAGAGCAGAGGGAGATTTGGGACCCGTA 35413
|| |||| ||| || | | ||||| | ||||| || |||||| |||| |||||
Sbjct 19117 CGTGAATATTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTT 19058
Query 35414 TACGGATTCCAATGGCGTCATTTTGGTGCTGAATATGATACCTGTTCTTCCGATTATACT 35473
|| ||||| |||||| | |||||||||||| |||| | || || | ||| ||||||
Sbjct 19057 TATGGATTTCAATGGAGGCATTTTGGTGCTAAATACAAGACGTGCGATGACGACTATACT 18998
Query 35474 GGAAAGGGTATTGATCAATTG-GCCAATATACTAAAGACCCTGAGAGAAAATCCAGATGA 35532
||| | ||||||||||||||| || || | | | | | ||| |||||| | ||
Sbjct 18997 GGACAAGGTATTGATCAATTGAAACAGGTTATTCATAAACTTAAGA-CAAATCCCTACGA 18939
Query 35533 TAGAAGGATGATTATGACGGCATGGAATCCTATGGATCTTCACCTTATGGCTCTTCCTCC 35592
|||||| || ||||||| || ||||| || ||| || || |||||| | || ||
Sbjct 18938 TAGAAGAATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCACC 18879
Query 35593 ATGCCACATGACTGCTCAATTTTATGT 35619
|||||| || | | || || |||||
Sbjct 18878 ATGCCATATTTTTTCACAGTTCTATGT 18852
>seq312
Length=16270
Score = 129 bits (142), Expect = 1e-24
Identities = 298/444 (67%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 1390 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 1331
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 1330 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 1271
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||||| || |||| | |||| || | |
Sbjct 1270 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 1218
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| |||||||||| || || || |||||||||| ||
Sbjct 1217 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 1158
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| | || | || ||| || | || |||||| | || |||| ||| ||
Sbjct 1157 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 1098
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| |||| || || || || | ||| ||||||| | || || ||||| |||| ||
Sbjct 1097 CGTTGAGTTCGTCGCCGACAGACTGTTGGTTGCTTTCGGTAACAAGAAA--TACTACAAG 1040
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| ||||||||| |||||||| || || ||| | | |||||| ||||| ||
Sbjct 1039 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 980
Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 979 GAAAAGAGAGTTTCTGACTACCAA 956
>seq292
Length=18136
Score = 129 bits (142), Expect = 1e-24
Identities = 298/444 (67%), Gaps = 15/444 (3%)
Strand=Plus/Minus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
||||||||||| | ||||||| |||| || ||| | || || ||||||||||||
Sbjct 3523 GTTGCCTTTGCCTCCATTGAAGGTGTCTTTTTCTCCGGTTCCTTTGCCTCCATTTTCTGG 3464
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
| || || || ||||| |||| ||| | |||| ||||| || || || | ||| |||
Sbjct 3463 TTGAAAAAGAGAGGTATGATGCCCGGTTTAACCTTTTCCAACGAATTGATCTGTAGAGAC 3404
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
|||||| | || ||||||||||||| || |||| | |||| || | |
Sbjct 3403 GAAGGTTTGCACACCGACTTTGCATGCTTGTTGTTCGCCCA----TTTGAAGA---ACAA 3351
Query 102098 TCAAGAGAAAG-GATTCTTG---AAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATT 102153
| ||| || ||| ||| |||||||||| || || || |||||||||| ||
Sbjct 3350 ACCAGACCCAGCCATTGTTGAAAAAATTGTCACCGAGGCTGTGGAAATTGAACAAAGATA 3291
Query 102154 TCTCACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTA 102213
|| | || | || ||| || | || |||||| | || |||| ||| ||
Sbjct 3290 CTTCTTGGACGCCTTACCAGTTGCTTTGCTAGGTATGAACGCTGACTTAATGAACCAATA 3231
Query 102214 CATTGAATTTGTGGCAGATAAACTATTGGTTGAAATGGG--ACTAGAAAAGCACTATAAT 102271
| |||| || || || || | ||| ||||||| | || || ||||| |||| ||
Sbjct 3230 CGTTGAGTTCGTCGCCGACAGACTGTTGGTTGCTTTCGGTAACAAGAAA--TACTACAAG 3173
Query 102272 GTTACCAACCCCTTCCCATTCATGGACAATATTTCCCTCGAGAATAAGACCAACTTTTTT 102331
|| ||||||||| |||||||| || || ||| | | |||||| ||||| ||
Sbjct 3172 GTCGAAAACCCCTTCGATTTCATGGAAAACATCTCCTTGGCCGGTAAGACTAACTTCTTC 3113
Query 102332 GAAAAGAGAGTCGCCGAGTATCAA 102355
||||||||||| | || || |||
Sbjct 3112 GAAAAGAGAGTTTCTGACTACCAA 3089
>seq12
Length=290010
Score = 84.2 bits (92), Expect = 4e-11
Identities = 157/228 (69%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 94792 CCTCCAGCAGTCTTGGAGATGATTGCCGCCTCCTTAAGAGTATCATAAATACCCTCAATG 94851
|| || ||||||||||| || || || ||| || | ||| || |||||||| ||||||
Sbjct 207990 CCACCTGCAGTCTTGGAAATCATGGCACACTCTTTCAAAGTGTCGTAAATACCTTCAATG 208049
Query 94852 CTATCATCTTGAAGGCCCAGAAGGAAGCACGAGGAAAGTTGGGG-TGTGACTGTTCCACA 94910
|| || | | | | | ||||| || || || | ||| || |||| | || ||
Sbjct 208050 GAGTCGTCCTTCATGGCAATCAGGAAACAAGAAGACATTTGAGGATGTGGC-GTACCGGC 208108
Query 94911 ATTAAACAGTGTGGGGGAAGCATGGGTAAAATAGTGCCTCGACATGAGATCATATGTTTC 94970
|||||| |||||||||||||| ||||| || || | |||||| | | || || |
Sbjct 208109 ATTAAATAGTGTGGGGGAAGCGTGGGTGAAGTATCTCAACGACATCAAGTTGTAAGTCTT 208168
Query 94971 AATGACAGATTTGATGTCTGATCCGTGAATGCCGACAGCCACACGCAT 95018
| || || | ||| || |||||||| || | |||||||||||
Sbjct 208169 CAGCACGGACTCGATATCGCTGCCGTGAATACCTAGGGCCACACGCAT 208216
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989463650504860
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |