Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_004003.1 Length=149599 Score E Sequences producing significant alignments: (Bits) Value seq312 152 5e-32 seq292 152 5e-32 >seq312 Length=16270 Score = 152 bits (168), Expect = 5e-32 Identities = 545/842 (65%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 936 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 995 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 996 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 1054 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| |||||| || Sbjct 1055 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 1114 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 1115 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 1170 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 1171 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 1230 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 1231 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 1290 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 1291 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 1350 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | | Sbjct 1351 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 1410 Query 13826 CTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | || |||| |||||| || ||||||||| | || | || || Sbjct 1411 CGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 1469 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 13942 || | || |||||||| || ||| | ||||||| | ||||| |||| ||||| | Sbjct 1470 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAGGTATCGA 1527 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 1528 TCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAAC 1587 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | || |||| ||| || || | | | || |||| |||||||||||||||||| Sbjct 1588 TCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAA 1647 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 |||| ||| ||| || ||||| || | | | ||| || || ||| | | || Sbjct 1648 TACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGT 1707 Query 14123 TGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| | Sbjct 1708 TCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 1767 Query 14180 AA 14181 || Sbjct 1768 AA 1769 >seq292 Length=18136 Score = 152 bits (168), Expect = 5e-32 Identities = 545/842 (65%), Gaps = 19/842 (2%) Strand=Plus/Plus Query 13351 TTAGAAATAACGCCCATTTTTTGATATTCACTAACTCTTTTTTCAAAAAAGTTAGTTTTA 13410 || || ||||| || ||||| || ||| |||||| ||||| || |||||||| ||| Sbjct 3069 TTGGACATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTA 3128 Query 13411 CCTTCCAGTGATATATTTTCCATAAAATCGAATGGATTTGTTGACATAA-ACACTTTATC 13469 || ||| || || |||||||| |||||||| || ||| | ||| | | ||| | Sbjct 3129 CCGGCCAAGGAGATGTTTTCCATGAAATCGAAGGGGTTT-TCGACCTTGTAGTATTTCTT 3187 Query 13470 ACAACCTAGTTCTAATAATAATCTATCAGCAATAAACTCAATATATTGAGACATTAAATC 13529 ||| | | | || | ||| || || | ||||||| ||||| |||||| || Sbjct 3188 GTTACCGAAAGCAACCAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 3247 Query 13530 ACAATTCATACCTATTAGTTTTACAGGAATTATATTAGTTAAAAAT---TCTTT-TTCTA 13585 | |||||||||| | || || | | || || | ||||| ||| | Sbjct 3248 AGCGTTCATACCTAGCAAAGCAACTGGTA----AGGCGTCCAAGAAGTATCTTTGTTCAA 3303 Query 13586 TAGACACAGCCTCGTTTATAATAATCTTAATAATGTCATTAGAAGGAGGATATTTTAGAT 13645 | |||||||||| | | ||| | | || |||| | || | || | || Sbjct 3304 TTTCCACAGCCTCGGTGACAATTTTTTCAACAATGGCTGGGTCTGGTTTGTTCTTCAAAT 3363 Query 13646 GTTTAAAAATTAAACACGCAAAATCACAATGAAGGCCCTCATCTCTACTAATAAGTTCGT 13705 | || | || || ||||| || || | || || ||||||| || | ||||| Sbjct 3364 GGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAATTCGT 3423 Query 13706 TTGAAAATGTTAATCCTGGCATCAATCCTCGtttttttAACCAAAATATTGCAGCGAATG 13765 | ||||| ||||| || ||||||| |||| ||||| ||||| || || | || || | Sbjct 3424 TGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGCAAAGG 3483 Query 13766 ATCCGGAAAAGAATATTCCCTCAACTGCAGCAAACGCTATTAGTCGTTCTCCAAACGATG 13825 | ||||| || || | || |||| | ||||| || | ||||| ||| |||||| | | Sbjct 3484 AACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAACAAGG 3543 Query 13826 CTTTTTTGT-TTGATATCCATTTTCTAGCCCATTCAGAtttttttttAATAAAATCCATT 13884 | | || |||| |||||| || ||||||||| | || | || || Sbjct 3544 CGTCAGCGTCTTGA-ATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTGGGATG 3602 Query 13885 GTTTCGATTGCATTGAATAAATGTTCCTTCTCTTTAG--TACTTGAAATGTATGTATCAA 13942 || | || |||||||| || ||| | ||||||| | ||||| |||| ||||| | Sbjct 3603 GTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGA--TGTAGGTATCGA 3660 Query 13943 TAAGTAAGCTATACATTTCAGAGTGTATGTTTTCTATAGCTATCTGAAAACCATAAAAAC 14002 | | ||| || |||||||||| || ||||| || || || ||||| || |||| Sbjct 3661 TCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGAAAC 3720 Query 14003 ATCTAGCTTCTGACCATTGTACCTCCGAGTAAAATCTTTCTGCCAAGTTTTCATTAACAA 14062 | || |||| ||| || || | | | || |||| |||||||||||||||||| Sbjct 3721 TCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAACAA 3780 Query 14063 TACCATCACTAGCTGCAAAAAATGCCAATATGTTTTTAATAAAGTATTGCTCTTCATTGT 14122 |||| ||| ||| || ||||| || | | | ||| || || ||| | | || Sbjct 3781 TACCGTCAGAAGCGGCGAAAAAGGCAAGAACTCTGGAAATGAAAAATCTCTCGTTCTCGT 3840 Query 14123 TGAGT---TTTTTCCAATCGGCTAAATCCTTAGAAAGATCTACTTCATCAACTGTCCAAA 14179 | | | || ||||| || | ||||||||| | ||| | ||| ||| | ||||| | Sbjct 3841 TCATTCTGTTGTTCCAGTCATGGATATCCTTAGACAAATCAATTTCTTCAGCGGTCCAGA 3900 Query 14180 AA 14181 || Sbjct 3901 AA 3902 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478532015438880