Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_004156.2
Length=231621
Score E
Sequences producing significant alignments: (Bits) Value
seq170 93.3 6e-14
seq38 89.7 8e-13
>seq170
Length=39039
Score = 93.3 bits (102), Expect = 6e-14
Identities = 180/258 (70%), Gaps = 6/258 (2%)
Strand=Plus/Minus
Query 70033 TTTGGATTCGCTCGGCTTCACCGACAGACAAGAGGGCGATCTGGGGCCAGTGTACGGATT 70092
||| ||| | | || |||| || || ||| || ||||||||||| || || |||||
Sbjct 19109 TTTAGATAAGATGGGGTTCAAAGATAGGAAAGTAGGAGATCTGGGGCCCGTTTATGGATT 19050
Query 70093 CCAGTGGAGGCACTCGGGCACCAAGTATGTAGAC-TGCGA-GACAGACTATTCGGGTCAG 70150
|| |||||||| | || | || || |||| ||||| ||| |||||| | || ||
Sbjct 19049 TCAATGGAGGCATTTTGGTGCTAAATACA-AGACGTGCGATGAC-GACTATACTGGACAA 18992
Query 70151 GGTGTTGATCAATTGCAGACA-ATCATTGACACTCTCAAGACCAATCCAACAGATAGGAG 70209
||| ||||||||||| | ||| | ||| | | || ||||| ||||| ||||| ||
Sbjct 18991 GGTATTGATCAATTG-AAACAGGTTATTCATAAACTTAAGACAAATCCCTACGATAGAAG 18933
Query 70210 GATCGTAATGTGCTCATGGAATCCTGCAGATTTGCACCAAATGGCACTACCACCGTGTCA 70269
||| | ||| | | ||||| || || ||||| || ||||||| | ||||| || ||
Sbjct 18932 AATCATTATGAGTGCCTGGAACCCAGCTGATTTTGACAAAATGGCTTTGCCACCATGCCA 18873
Query 70270 CTGTTTGGCTCAGTTTTA 70287
||| | ||||| ||
Sbjct 18872 TATTTTTTCACAGTTCTA 18855
>seq38
Length=131761
Score = 89.7 bits (98), Expect = 8e-13
Identities = 310/475 (65%), Gaps = 13/475 (3%)
Strand=Plus/Plus
Query 96876 CAGGGCGGCAATAAACGGCCAGGCGCTATAGCCGTCTACTTGGAACCTTGGCACGCGGAC 96935
||||| || |||||| | || || || | ||| | ||| ||||||| ||||| || ||
Sbjct 125691 CAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGAT 125750
Query 96936 GTTTTTGACTTTATCGAGATGCGCAAAAACTCTGGCTTTGAAGAGGCA---CGAGCCAGG 96992
| ||||| ||||| || || | || ||| || | |||||| | || || ||
Sbjct 125751 ATATTTGATTTTATTGATATTAGGAAGAACCACGG---TAAAGAGGAAATTCGTGCAAGA 125807
Query 96993 GACTTGTTTTATGCACTCTGGGTGCCAGATTTGTTCATGAAGCGCGTCAACGACGGTGGC 97052
|| ||||| ||| || ||| | || ||| | ||||||||||| ||| | || |||
Sbjct 125808 GATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGG 125867
Query 97053 TACTGGAGCCTAATGTGCCCCGAC-TCGTCACCCGGTCTGTCCGATTGCTGGGGCGAAGA 97111
||||| | | || | || || || | || ||| | |||||| | || || ||
Sbjct 125868 ACCTGGA-CATTATTCTCTCCAACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGA 125926
Query 97112 GTTTGAGGCCAAGTACACGGCCTACGAGCAAGAGGGCCGATACGTGAGACGAGTCGATGC 97171
||||||||| || || ||||||| |||| || || || |||| | || | ||
Sbjct 125927 GTTTGAGGCTCTATATACCCGCTACGAGAAAGAAGGTCG--TGGTAAGACTA-TCAAAGC 125983
Query 97172 ACGAGAACTGTGGAAGGCCATCGTGACGGCTCAGGTAGAGACTGGAACTCCGTACATTCT 97231
| | || | ||| | |||| || ||||| || ||||| || || | | || |
Sbjct 125984 CCAAAAATTATGGTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGT 126043
Query 97232 CTACAAGGATACCGTGAATCGCAACAGC-AACCAACGCCACTTGGGCACCATCAAGGGCT 97290
||||||||| | || | | || | | || ||| |||| || ||||||| |
Sbjct 126044 TTACAAGGAT-GCTTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCAT 126102
Query 97291 CCAATCTGTGCACGGAAATTGTAGAGTACGCCTCTCCGGACGAGACGGCAGTTTG 97345
| || | ||| |||||||| || ||| | |||| || || || || |||||
Sbjct 126103 CAAACTTATGCTGTGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTG 126157
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 740971273325920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |