Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_004681.1
Length=75931
Score E
Sequences producing significant alignments: (Bits) Value
seq17 428 2e-115
seq1 168 3e-37
>seq17
Length=237104
Score = 428 bits (474), Expect = 2e-115
Identities = 576/801 (72%), Gaps = 3/801 (0%)
Strand=Plus/Plus
Query 66677 GTGGACGTCATTCCCACCGGCTCTATCGCTCTGGACGGCGCTCTGGGCATCGGGGGGTAC 66736
|| || ||||| ||||| ||||| ||||| |||||| ||| || |||||||| ||
Sbjct 124031 GTCGAGGTCATCCCCACGGGCTCCATCGCGCTGGACATCGCGCTCGGCATCGGCGGCCTG 124090
Query 66737 CCGAGGGGCCGGGTGGTGGAAATCTACGGCCCAGAATCTTCAGGGAAGTCAACTCTGTGT 66796
||| | || || || | || | |||||||| || || || || ||| | || ||
Sbjct 124091 CCGCGCGGGCGCGTCATCGAGGTGTACGGCCCGGAGTCCTCCGGAAAGACGACCGTGGCG 124150
Query 66797 CTCCACGCGGTGGCCAATGCGCAGAAGGCCGGTGGCAACGCCGCCTACATCGACGCTGAG 66856
|||||||| ||||||| || ||| ||||| |||| ||| || | ||||||||| |||
Sbjct 124151 CTCCACGCCGTGGCCAGCGCCCAGCGCGCCGGCGGCATCGCGGCGTTCATCGACGCCGAG 124210
Query 66857 CACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGACCTCGACAACCTCGTGGTG 66916
||| | || ||||| |||||||||||| |||||| || ||| |||| ||| | ||
Sbjct 124211 CACGCACTCGACCCGGAGTACGCCAAGAAGCTCGGCGTCGACACCGACGCCCTGCTCGTC 124270
Query 66917 GTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTCCTCGTCAAGTCTGGC 66976
||||||||||| || |||||||| || |||||| ||| | || || || |||
Sbjct 124271 TCCCAGCCGGACACGGGGGAGCAGGCGCTCGAGATCACGGACATGCTGATCCGCTCGGGC 124330
Query 66977 GAGCTGTCCATCGTCGTCGTTGACTCTGTGGCGGCCCTGGTGCCGCGCGCCGAGCTCGAA 67036
| ||| |||| ||||| | ||||| || |||||||| ||||| || ||| ||||
Sbjct 124331 GCGCTCGACATCATCGTCATCGACTCCGTCGCGGCCCTCGTGCCCAAGGCGGAGATCGAG 124390
Query 67037 GGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGCCTCATGTCGCAGGCCATGCGC 67096
||||| || || ||||| |||||||| || || || ||||||||||||||||| |||||
Sbjct 124391 GGCGAGATGGGCGACAGCCACGTCGGTCTCCAGGCCCGCCTCATGTCGCAGGCGCTGCGC 124450
Query 67097 AAGCTCACTGGCACCATCTCCAGCACCAACACGCTGACGCTCTGGGTCAACCAGTTGCGC 67156
||| |||| || | || | || |||| | ||| |||||||| | |||
Sbjct 124451 AAGATCACCGGTGCGCTCAGCGCGTCCGGCACGACCGCCATCTTCATCAACCAGCTCCGC 124510
Query 67157 GAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACGGGCGGAAAGGCTTTG 67216
||||||||||| |||| || |||| | ||||| || || || || ||||| ||
Sbjct 124511 GAGAAGATCGG---CGTGTTCTTCGGCTCTCCCGAGACGACGACCGGTGGCAAGGCGCTG 124567
Query 67217 AGGTTCTACGCCTCAGTCCGCATGGATGTCCGTCGCATCGCCACCGAGAAGGAAGGCGAT 67276
| |||||||||||| ||||| | || |||| ||||||| ||| ||||| |||
Sbjct 124568 AAGTTCTACGCCTCGGTCCGTCTCGACATCCGCCGCATCGAGACCCTCAAGGAGGGCACC 124627
Query 67277 GAGGCTGTCGGCAACCGCACCCGGGTGAAAGTCGTCAAGAACAAGCTGGCCCCGCCGCAC 67336
|| || ||||||||||| ||||| ||||| ||||||||||||||| |||| |||||| |
Sbjct 124628 GACGCGGTCGGCAACCGGACCCGCGTGAAGGTCGTCAAGAACAAGATGGCGCCGCCGTTC 124687
Query 67337 CGCAACGCCGAGTTCTCCGTCGTGTACGGGGAGGGCATCTCGCGTGAGGTCGAACTCCTC 67396
| ||||||||| | || | ||||||| |||||||| || |||| | ||| ||
Sbjct 124688 AAGCAGGCCGAGTTCGACATCCTCTACGGGGTCGGCATCTCCCGCGAGGGTGGCCTCATC 124747
Query 67397 GACCTGGCCGTGTCGCAGGGCCTGGTGAAGAAGTCGGGCGCCTGGTTCAAGTACGGGGAC 67456
||| ||| |||| ||| || | ||| ||||| || | ||||||| ||||| | |
Sbjct 124748 GACATGGGCGTGGAGCACGGGTTCGTGCGCAAGTCCGGGTCGTGGTTCACCTACGGCGGC 124807
Query 67457 AAGAACGTCGCTCAGGGCAAG 67477
| | ||| |||||||||
Sbjct 124808 GACCAGCTCGGGCAGGGCAAG 124828
>seq1
Length=1297082
Score = 168 bits (186), Expect = 3e-37
Identities = 213/292 (73%), Gaps = 13/292 (4%)
Strand=Plus/Plus
Query 61151 GACCCCGAGCTGCGGTTCACCCAAGGTGGGCAGGCCGTCGCCAACTTCACCGTCGTGTCC 61210
||||| |||||||| ||||||| || ||| || ||||||||||| || | ||||
Sbjct 1125055 GACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCC 1125114
Query 61211 AACGAACGCCGCCG-----CGACGCCCAGGGCAAC---TGGGTCGACGGCGACGCCACAT 61262
| |||||| | |||| |||| ||| ||| ||||| ||| || |
Sbjct 1125115 A-----CGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGT 1125169
Query 61263 TCCTCCGCTGCACCATCTGGCGCGACGCCGCCGAGAACGTGGCGGAAAGCCTCCAGAAAG 61322
|| | |||||| | ||||||||||| ||||| |||||||| ||||| || ||| |
Sbjct 1125170 TCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGG 1125229
Query 61323 GCCAGCGCGTCATCGTGCATGGCTACCTCAAGCAGCGCTCCTTCGAGACCAAGGAGGGCG 61382
|| ||||||||||||||| ||| |||| |||||||| | ||||||| ||||| |
Sbjct 1125230 GCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGACCCGCGAGGGGG 1125289
Query 61383 ACAAGCGCACCGTCATCGAGGTGGAGGTAGACGAGATCGGCCCGTCGCTGCG 61434
| |||||||||||| ||||| || |||| ||||||||||| || || |||||
Sbjct 1125290 AGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCCTGCG 1125341
Score = 122 bits (134), Expect = 4e-23
Identities = 148/198 (75%), Gaps = 8/198 (4%)
Strand=Plus/Plus
Query 51207 CCACCCCAGGACCTAGCCGCCGAG-TCAGCAGTCCTCGGCGCCATGCTTCTCTCCAAGAA 51265
|| ||||||||| | ||||||||| | ||| || ||||||| |||||| || || ||| |
Sbjct 1128287 CCGCCCCAGGACGTCGCCGCCGAGATGAGC-GTGCTCGGCGGCATGCTGCTGTCGAAGGA 1128345
Query 51266 CGCCACCCCGGCCGTCATGGAG---ATTCTCAAGCCCGAGGACTTCTACCGCCCCAACCA 51322
||||| | ||| |||||| ||| || | | |||| |||||||||||| ||
Sbjct 1128346 CGCCATCGCGGACGTCATCGAGCAGATCCGCGGCTCCGA---CTTCTACCGCCCGGCGCA 1128402
Query 51323 CGCCACCGTCTACCAGATCATCACCGACCTCTACATGGCCGGTGAGTCCGCCGACGTCAT 51382
|| | ||||||| || |||| |||||||||| ||| ||| ||||||||| ||
Sbjct 1128403 CGAGATCGTCTACGAGTCGATCATCGACCTCTACGGTCGCGGCGAGCCCGCCGACGCGAT 1128462
Query 51383 CACCGTCGCCGCGGAGCT 51400
|||||||| |||||||||
Sbjct 1128463 CACCGTCGTCGCGGAGCT 1128480
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 242826305692304
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |