Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_004688.1
Length=110865
Score E
Sequences producing significant alignments: (Bits) Value
seq17 158 9e-34
>seq17
Length=237104
Score = 158 bits (174), Expect = 9e-34
Identities = 238/336 (71%), Gaps = 3/336 (1%)
Strand=Plus/Minus
Query 99229 TCGGAGACGAACGCGCCCTGTATCCGGATGGCGCTGCGCGCCCCCACTGGCAGAAATAAC 99288
|| ||||| |||||||||| | || |||| || ||| |||| ||||| || |
Sbjct 111858 TCCGAGACCCACGCGCCCTGCACGCGCATGGGCTTGGCCGCGCCCATGGGCAGGAACAGG 111799
Query 99289 CCGTCACCCATTCCCATGAGTTGCTCGGCTCCGCCCTCGTCCAGGATCACCCGGCTATCG 99348
|||| ||| || ||||| | ||| || ||| || ||| || | || || ||
Sbjct 111798 GCGTCGCCCTGGCCGATGAGCTTCTCCGCGCCGGGCTGGTCGAGCACGACGCGCGAGTCC 111739
Query 99349 GTGAGGGACGCTGTGGCGAACGACAGCCGCGAGGGCACGTTGCTCTTGATGAGGCCCGTC 99408
| |||||||| || ||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 111738 GCGAGGGACGACGTCGCGAACGCGAGCCGCGACGGCACGTTCGCCTTGATGAGGCCCGTC 111679
Query 99409 ACCACATCCACGGAGGGCCGCTGCGTCGCCAGGACGAGATGAATGCCGGCCGCACGCGCC 99468
|| || || || || || ||||||||||| || || || || ||||| ||||| |||||
Sbjct 111678 ACGACGTCGACCGACGGGCGCTGCGTCGCGAGCACCAGGTGGATGCCCGCCGCGCGCGCG 111619
Query 99469 TTCTGCGCGATGCGGACAATGTTGGCCTCAACCTCTTTCTTGTAGCCACCCATCATGAGA 99528
||||| |||||| || |||||| || || | | || | ||||||||||
Sbjct 111618 AGCTGCGTGATGCGCTGGATCGAGGCCTCGACGTC--GCGCGGGGCGA-CCATCATGAGG 111562
Query 99529 TCAGCGAGTTCATCCACCACTACCACGATGTAGGGG 99564
|| ||||| || || || || |||| | ||| |||
Sbjct 111561 TCGGCGAGCTCGTCGACGACGACCAGCAGGTACGGG 111526
Score = 104 bits (114), Expect = 2e-17
Identities = 150/212 (71%), Gaps = 0/212 (0%)
Strand=Plus/Minus
Query 99691 AGGTGGGGGATACCGTTGTACGGGGTGAGCTCGACACATTTGGGGTCGATCATGATGAGT 99750
||||| ||||| || | ||| || |||||||| | |||||||| | | | |||
Sbjct 111339 AGGTGCGGGATGCCCTCGTAGATCGTCAGCTCGACGCGCTTGGGGTCCACGAGCACGAGC 111280
Query 99751 TTGACCCGATCAGGGGTCGCCCGGTAGAGCAGCGAAACCAGCATTGAGTTGATGAAGCTG 99810
||| | || || |||| || ||| | ||| | ||| ||||||||||||||
Sbjct 111279 CGCACCTGCTCGGGCGTCGATCGCATGAGGATCGACGTGATCATGGAGTTGATGAAGCTC 111220
Query 99811 GACTTGCCCGATCCGGTCGCGCCAGCCACCAGCAGATGCGGCATCTTAGCCAGGTTCAGG 99870
|||||||||| || |||||||| || || || | || |||||||| || |||||| |
Sbjct 111219 GACTTGCCCGCGCCCGTCGCGCCCGCGACGAGGATGTGGGGCATCTTCGCGAGGTTCGCG 111160
Query 99871 GAGATGTCCTTGCCCTCGACGTCCTTGCCCAC 99902
|| || |||||||||||||||||| ||
Sbjct 111159 ACGACGTAGCCGCCCTCGACGTCCTTGCCGAC 111128
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 354602173544712
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |