Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_005345.2 Length=49220 Score E Sequences producing significant alignments: (Bits) Value seq2 93.3 1e-14 seq9491 84.2 7e-12 >seq2 Length=464139 Score = 93.3 bits (102), Expect = 1e-14 Identities = 262/386 (68%), Gaps = 20/386 (5%) Strand=Plus/Minus Query 7427 TCGACCTCGAAACGACGGGCGTTGACGTCGAGCAGGACCGGATCGTGACCGCGGCAGCGA 7486 ||||| ||| || |||||| | |||||||| ||||| |||| ||||| || | Sbjct 130212 TCGACACCGAGACCACGGGCCTCGACGTCGACGTCGACCGCGTCGTCACCGCCGC---GC 130156 Query 7487 TCGACCTCGGCG--CCGAGAAGCCCCTCACG-CTGGA-GTGGCTCGCCGACCCGGGGATC 7542 ||| ||| ||| ||| | ||| | |||| | | | ||||||| ||||||||| || Sbjct 130155 TCGTGCTCCGCGAGCCGGGC-GCCACGCACGTCCGTACGTGGCTCCTCGACCCGGGCGTC 130097 Query 7543 GAGATCCCCGAGGGTGCGACGGCCGTGCACGGCATCACGACCGAGCACGCCCGCGAGCAC 7602 |||||||| | || || |||| | |||||||||||||||| ||| ||| | |||| Sbjct 130096 GAGATCCCGGCGGAGGCCACGGGGATCCACGGCATCACGACCGCGCAGGCCGCGGCGCAC 130037 Query 7603 GG--CGAGCGCGCGCACGACGTCGTCGACCAGGTCGCCGAGACGCTCG-CG-CTCCG-CG 7657 || || | | ||| || || ||||| || |||| |||||||| || | || | Sbjct 130036 GGGTCG-GTCCCCGC-CGTCGCGCTCGACGAGATCGC---GACGCTCGTCGTCGACGCCC 129982 Query 7658 TTCGGGACGGTGTGCCGGTCGTCGGGCACAACGTGCCTTATGACTTGACGCTGCTCGACC 7717 || ||||| || ||| |||||| |||||| | | ||| | || | |||||| Sbjct 129981 AGCGCGACGGCGTCCCGCTCGTCGCCTACAACGCCGCGTTCGACCTCGCGATCCTCGACA 129922 Query 7718 GCGAGTGCCGCCGGTACGAGCTGCCGCTGCTGCAGGACCGGCT-CGACGGCACGCCGCTG 7776 |||| | ||| ||| ||||||| ||| | || || | |||| || || | Sbjct 129921 CCGAGCTCGTGCGGCACGGGCTGCCGACGCTCTCCGCGCGCCTGGGGCGGCCCG-TGCGG 129863 Query 7777 CACGTGATCGACACGCGGGTGCTCGA 7802 | ||| ||||| ||| |||||||| Sbjct 129862 CCGGTGCTCGACCCGCTCGTGCTCGA 129837 >seq9491 Length=867449 Score = 84.2 bits (92), Expect = 7e-12 Identities = 138/193 (72%), Gaps = 12/193 (6%) Strand=Plus/Minus Query 9511 GTGGCAGTCGCGGGCCCTGTGCGCGCAGACCGACCCGGAGCTGTTCCACCCGGAGATCGG 9570 ||||||| ||| || |||||||| ||||| ||||||||| ||| |||||||| || Sbjct 198766 GTGGCAGGAGCGTGCGCTGTGCGCCCAGACGGACCCGGAGGCCTTCTTCCCGGAGAA-GG 198708 Query 9571 GCGGACGTGC---CGCAACGCGCGGAAGGTATGCGGGGCGTGCGAGGTGCAGAGCGAGTG 9627 |||| || | ||| | ||| |||||| ||| || |||||||| | | ||| || Sbjct 198707 GCGG--GTCCACGCGCGAGGCGAAGAAGGTCTGCACGGGCTGCGAGGTCCGGGCCGAATG 198650 Query 9628 CCTCGCGCATGCGCTCGCCGTGCCCGA-GACCGA--CGGCGTGTGGGGCGGGCTGACGTA 9684 ||| | | | ||||||| || ||| || || |||| | ||||||||||| | | Sbjct 198649 CCTGGAGTACGCGCTCGA---GCACGACGAGCGCTTCGGCATCTGGGGCGGGCTCTCCGA 198593 Query 9685 CCGCGAGCGCCGC 9697 || ||||||||| Sbjct 198592 GCGGGAGCGCCGC 198580 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157364660249328