Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_005839.2
Length=131680
Score E
Sequences producing significant alignments: (Bits) Value
seq139 118 9e-22
seq7730 96.9 3e-15
seq4 82.4 6e-11
>seq139
Length=48224
Score = 118 bits (130), Expect = 9e-22
Identities = 158/218 (72%), Gaps = 4/218 (2%)
Strand=Plus/Minus
Query 48511 CCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGCCAATTGTCGCTC 48570
||||| ||| | ||| | ||| |||||| |||||||||||||||| || || |
Sbjct 32243 CCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACC 32184
Query 48571 GTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGGCACACTTTCCTT 48630
||| || |||||||||||| | | || || | || ||||| || | || ||||||
Sbjct 32183 GTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTT 32124
Query 48631 GTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCCGTCTCGACTGTT 48688
||| ||||||| ||| | | | || |||||||||| ||| || || | ||||
Sbjct 32123 GTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCAACTTCCAATGTT 32066
Query 48689 ATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
|||||||||||||| | ||| || || |||||||||||
Sbjct 32065 ATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32028
Score = 105 bits (116), Expect = 6e-18
Identities = 160/228 (70%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct 32483 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 32424
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || |||||||||||| | | || || | ||| ||||| ||
Sbjct 32423 CAAGGTTCTACCGTCTTCTAGCTGCTTACCGGCAAAGATCAACCTCTGTTGATCTGGAGG 32364
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || |||||||||| |||||| ||| | | || || |||| || ||
Sbjct 32363 GATACCTTCCTTGTCCTGGATTTTCGACTTAACGTTATCGATCGTGTCGGAGGATTCAAC 32304
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | || |||||||||||||| | ||| || ||||| ||||||||
Sbjct 32303 CTCTAAAGTGATGGTTTTACCGGTCAAAGTCTTAACAAAGATCTGCAT 32256
Score = 87.8 bits (96), Expect = 2e-12
Identities = 156/228 (68%), Gaps = 0/228 (0%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | |||||| || || | ||||| ||| |||||||||||| ||||| || |
Sbjct 32939 ACCACCCCTCAACCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGA 32880
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
|| || | || || || ||||||||| | |||| || | ||||| || ||
Sbjct 32879 CAGCGTTCTACCATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGG 32820
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGATAGACGCTATGGTATCGGTAGACTCCGT 48678
| || ||||||||| ||||||| ||| | | || || |||| ||| ||
Sbjct 32819 AATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAAC 32760
Query 48679 CTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCAT 48726
||| | ||||| || || || || |||||||| || ||||| |||||
Sbjct 32759 CTCTAGGGTTATAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32712
>seq7730
Length=350
Score = 96.9 bits (106), Expect = 3e-15
Identities = 146/206 (71%), Gaps = 4/206 (2%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | ||| || ||||| || ||||| || |||||||| |||||||| ||||
Sbjct 208 ACCACCTCTCAATCTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGA 149
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || |||| || | |||||||||| | | || || | || ||||| ||
Sbjct 148 CAAGGTTCTACCGTCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGG 89
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676
| || ||||||||| ||||||| ||| | | | || |||||||||| ||| ||
Sbjct 88 GATACCTTCCTTGTCTTGAATTTTCGACTTAACGTTGTCG--ATGGTATCGGAAGATTCA 31
Query 48677 GTCTCGACTGTTATGGTTTTACCGGT 48702
|| | ||||||||||||||||||
Sbjct 30 ACTTCCAATGTTATGGTTTTACCGGT 5
>seq4
Length=403504
Score = 82.4 bits (90), Expect = 6e-11
Identities = 162/238 (68%), Gaps = 4/238 (2%)
Strand=Plus/Minus
Query 48499 ACCTCCGCGCAACCTTAACACTAAATGAAGTGTGCTCTCCTTTTGAATGTTGTAATCAGC 48558
||| || | || || || || || ||||| || ||||||||| ||||| || || |
Sbjct 386761 ACCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGA 386702
Query 48559 CAATTGTCGCTCGTCCTCCAGCTGCTTACCGCCGTAAATTAAACGCTGCTGATCCACCGG 48618
||| || | |||||||| |||||||| | |||| | | || || || ||
Sbjct 386701 CAAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGG 386642
Query 48619 CACACTTTCCTTGTCCATAATTTTCTGCTTGA--TAGACGCTATGGTATCGGTAGACTCC 48676
| || ||||||||| ||| || ||||| | | || || || |||| |||||
Sbjct 386641 AATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGTCG--ATCGTGTCGGAGGACTCG 386584
Query 48677 GTCTCGACTGTTATGGTTTTACCGGTGAGAGTTTTCACAAAAATCTGCATCGTGTCTT 48734
||| | || ||||| ||||| || | ||| || || ||||||||||| |||||||
Sbjct 386583 ACCTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATAGTGTCTT 386526
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 421202468081492
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |