Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_005902.1
Length=186250
Score E
Sequences producing significant alignments: (Bits) Value
seq80 132 6e-26
seq78 114 2e-20
seq170 100 3e-16
seq10 98.7 1e-15
seq11 96.9 4e-15
seq44 87.8 2e-12
>seq80
Length=81108
Score = 132 bits (146), Expect = 6e-26
Identities = 388/589 (66%), Gaps = 28/589 (5%)
Strand=Plus/Minus
Query 164398 AATTTTGAAGAAATGGGAGTAGGTGGACTAGATCGAGAATTTTCTCTTATTTTCAGACGA 164457
|| |||||||| |||| || ||||| | ||| ||| ||| || ||||||||| ||
Sbjct 7433 AAGTTTGAAGATTTGGGTGTCGGTGGTTTGGATAAAGAGTTTACTAAAATTTTCAGAAGA 7374
Query 164458 GCATTTGCTTCTAGATCAGTTCCTATCGAAATAATaaaaaaaTTAGGCTGTAAACATATA 164517
|| ||||| | || ||||| | | ||| ||||| | || | ||| |
Sbjct 7373 GCGTTTGCAAGTCGAATCTTTCCTCCTTCAGTTATAGAAAAACTGGGTATTTCTCATGTT 7314
Query 164518 AAAGGAATTTTATTACATGGACCTCCTGGTTGCGGTAAAACATTAATGGCTCGATGCATT 164577
||||| | |||| | || ||||| ||| ||||| || ||||| || || |||
Sbjct 7313 AAAGGTTTGCTATTGTACGGTCCTCCAGGTACTGGTAAGACCTTAATTGCAAGAAAGATT 7254
Query 164578 GCT-CAAGCTTTTAAATCGC----GACCCGTTAAAATTGTTAATGGTCCTGAATTATTGA 164632
| | ||| | | ||| || || || ||||| || |||||||| ||| | ||||
Sbjct 7253 GGTACAA--TGCTGAAT-GCTAAAGAGCCC--AAAATCGTCAATGGTCCAGAAATTTTGA 7199
Query 164633 ACAAATATGTAGGTGAGTCAGAAGCTAATGTTAGAAAGTTGTTTCAGGAGGCTGAAGAAG 164692
||| || || ||| ||||||| || || | || || ||| |||| || |||| ||
Sbjct 7198 GCAAGTACGTTGGTTCTTCAGAAGAAAACATTCGTAATTTATTTAAGGATGCAGAAGCAG 7139
Query 164693 AACAAAAGAAAGC--AGGTTTAGCTAG-TAAATTACATGTTATTGTTTTTGATGAGATAG 164749
|| | | | || ||| | || | | |||||| ||||| |||| |||||| | |
Sbjct 7138 AATATAGG---GCCAAGGGTGAGGAATCTTCCTTACATATTATTATTTTCGATGAGCTGG 7082
Query 164750 ATGCTCTTTGCAAAAAACGTGGT------GATAATATTATTCATGATG----CAGTG--G 164797
|| || ||| ||| | | ||| | | || || | || | || || |
Sbjct 7081 ATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTGATGGTACTGGTGTAGGGGACAATGTAG 7022
Query 164798 TTAATCAGTTGCTTTCTAAAATAGATGGTGTAGAATCCTTAAATAATATTTTAATTGTAG 164857
||||||| ||| | ||||||| |||||||| || || ||||||||||| || | |
Sbjct 7021 TTAATCAATTGTTAGCTAAAATGGATGGTGTTGATCAGTTGAATAATATTTTGGTTATTG 6962
Query 164858 GTATGACCAACCGACCTGATTTAATTGATGATGCTTTATTACGACCTGGTCGATTAGAAT 164917
|||||||||| || |||||||| || |||| | || || || ||| |||| |||
Sbjct 6961 GTATGACCAATCGTAAAGATTTAATAGACAGTGCTCTTTTGCGTCCAGGTAGATTTGAAG 6902
Query 164918 TGAAAATAGAAATAGGATTACCCGACAAAGAAGGACGCCTTCAAATTTT 164966
| || | ||||| |||||||| || ||||| | || ||||||||
Sbjct 6901 TCCAAGTTGAAATTCATTTACCCGATGAAAAAGGAAGACTCCAAATTTT 6853
>seq78
Length=82713
Score = 114 bits (126), Expect = 2e-20
Identities = 123/163 (75%), Gaps = 0/163 (0%)
Strand=Plus/Plus
Query 19341 TAAGATCTTCTAAAATACCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAG 19400
||||| || | || || ||| |||| ||||| || ||||||||| | | |||||| |
Sbjct 49957 TAAGAACTACAAAGATTCCTCAAATTGGTGACAAATTTGCTTCTCGTCACGGTCAAAAGG 50016
Query 19401 GCACATGTGGTATGATTTATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGC 19460
| || |||||| | |||||| |||||||||||| ||||| ||| ||||| || |
Sbjct 50017 GTACTATTGGTATCACATATCGTAGAGAAGATATGCCATTTACCGCAGAAGGTATTGTTC 50076
Query 19461 CGGATCTTATTATTAACCCACATGCTTTTCCAAGTCGAATGAC 19503
| ||| | ||||||||||| |||||| ||||| ||| |||||
Sbjct 50077 CAGATTTGATTATTAACCCTCATGCTATTCCATCTCGTATGAC 50119
>seq170
Length=39039
Score = 100 bits (110), Expect = 3e-16
Identities = 366/571 (64%), Gaps = 43/571 (8%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAAT-TAT 6757
||||||||||||||||||| | |||||| ||| || || |||||| | ||| | |
Sbjct 18518 TGGATGAGGATTATAATCTTCAATTTCAAAGTCTGTCAACTTGAAATCA--TCAATGTCT 18575
Query 6758 CAGACtttttttttAATATTACAACAGGTGAA-GGTTTT--ATTGATCGAGTTAATTGTT 6814
|| | ||||||| || | ||| ||| || ||| | ||| | |||||
Sbjct 18576 TTAACGTCCCTTTTAATCTTTAGTTTCGGGAATGGTCTTGGATTTCTGGAGAT--TTGTT 18633
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
|||| | || | || || ||| ||||| ||| ||||| || | |||||||| || |
Sbjct 18634 CTTTCAAGGCATCAATGTGGTCTTTATAAACATGTGCATCCCCCAAAGTATGAATGAACT 18693
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
||||||| | ||| || ||| ||| |||||| | || || || ||||| || || |
Sbjct 18694 CACCTGGCTCCATGTCGACAACTTTAGCAATCATTCTAGTCAACAAAGCATATGATGCAA 18753
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAACATTGACAAG-ATAAA 6993
||||| ||||| || || |||||||| || | ||| || || ||| || ||
Sbjct 18754 TGTTAAACGGTACTCCCAACCCCATATCGCAAGAACGTTGGTACAAT----AAGCATGAA 18809
Query 6994 A---------TATTG------------TCTATAG---------CATAAAATTGACACAAT 7023
| || | ||| | | |||| || || | ||
Sbjct 18810 AGGCGGGGCTTACCGGATCCTTCTCCTTCTTTGGGGAAACTGACATAGAACTGTGAAAAA 18869
Query 7024 ACATGACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAA 7083
| ||| ||||| || ||| | | || | ||||| ||| ||||| ||| |||| |
Sbjct 18870 ATATGGCATGGTGGCAAAGCCATTTTGTCAAAATCAGCTGGGTTCCAGGCACTCATAATG 18929
Query 7084 ATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATA 7143
|| | |||||| | |||||||| || | ||| |||| || |||||||| |||
Sbjct 18930 ATTCTTCTATCGTAGGGATTTGTCTTAAGTTTATGAATAACCTGTTTCAATTGATCAATA 18989
Query 7144 CCCTGACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGA 7203
|| || || ||| | || || | | || ||||| |||||||| |||||||||
Sbjct 18990 CCTTGTCCAGTATAGTCGTCATCGCACGTCTTGTATTTAGCACCAAAATGCCTCCATTGA 19049
Query 7204 AACCCATAAATAGGACCTAAATCACCTTCTT 7234
|| ||||||| || || | ||| ||| |||
Sbjct 19050 AATCCATAAACGGGCCCCAGATCTCCTACTT 19080
>seq10
Length=295215
Score = 98.7 bits (108), Expect = 1e-15
Identities = 363/567 (64%), Gaps = 35/567 (6%)
Strand=Plus/Plus
Query 6699 TGGATGAGGATTATAATCTAACAATTCAAAATCTTCAAATTTAAAATCACATAAATTATC 6758
||| |||||||| || ||| | ||| |||||||| || ||||| ||| | |||| ||
Sbjct 184753 TGGGTGAGGATTGTAGTCTTCAATTTCGAAATCTTCTAACTTAAAGTCA--TCAATT-TC 184809
Query 6759 AGACttttt--ttttAATATTACAACAGGTGAAGGTTTTATTGATCGAGTTAA--TTGTT 6814
| | | ||||||| || | || ||| | | | | |||| | || |||||
Sbjct 184810 TGTAATGTCCCTTTTAATCTTTAATTTGGGGAATGGTCT-TGGATCTCTTGAAATTTGTT 184868
Query 6815 CTTTTATAGCTTTTATATGATCTAAATAAATATGAGCATCTCCTAGCGTATGAATAAATT 6874
| || | || | |||||||| ||| | ||| ||||| || | |||||||| || |
Sbjct 184869 CATTCAAGGCATCAATATGATCCTTATACACATGTGCATCCCCCAAAGTATGAATGAACT 184928
Query 6875 CACCTGGTTTCATATCAACAGCTTGAGCAATTAAATATGTTAATAATGCATAAGAAGCTA 6934
|||| |||| ||||||||| ||| ||| || | || | || ||||| || || |
Sbjct 184929 CACCCGGTTCCATATCAACGACTTTAGCTATCATTCTAGTCAGTAGCGCATATGAGGCGA 184988
Query 6935 CATTAAAAGGTACACCTAATCCCATATCTGCTGATCTTTGATAA------CA-------- 6980
|||||| || ||||| | |||||||| || | ||| || ||
Sbjct 184989 TATTAAATGGCACACCGAGCCCCATATCACAGGAACGTTGGTACAGCAAGCACGAAAGGC 185048
Query 6981 ----TTGACAAGATAAAATATTGTCTATAG---------CATAAAATTGACACAATACAT 7027
|| || | | | | ||| | | |||||||||| | || | |
Sbjct 185049 GAGGTTTACCACTTCCACTTCCCTCTTTGGGGAAACTGACATAAAATTGTGAAAAAATGT 185108
Query 7028 GACATGGAGGTAAAACAGCCTGATCTATATCAGATGGATTCCAAGCAGTCATTAAAATAC 7087
| ||||| ||||| | || || | ||| | || |||||||| |||| | || |
Sbjct 185109 GGCATGGCGGTAAGGCCATCTTGTCAAAATCTGCAGGGTTCCAAGCGCTCATGATGATTC 185168
Query 7088 GTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATTATTTGTAATTGATCTATACCCT 7147
|||||||| || ||||| |||||||| ||||| | | ||||| ||||| |
Sbjct 185169 TTCTATCATAAGGGTTTGTCTTTAATTTGTGTATAACCTGCTTCAGCTGATCGATACCTT 185228
Query 7148 GACCTTCATAATTAGTATGACAATTTATATAATTAGCTCCAAAATGTCTCCATTGAAACC 7207
| || ||| | | | || | | || || || ||||||||||||||||| ||||
Sbjct 185229 GTCCGGTATAGTCATCGTCGCAGGTCTTGTATTTGGCACCAAAATGTCTCCATTGGAACC 185288
Query 7208 CATAAATAGGACCTAAATCACCTTCTT 7234
|||||| |||||| | ||| ||| |||
Sbjct 185289 CATAAACAGGACCCAGATCCCCTACTT 185315
>seq11
Length=290327
Score = 96.9 bits (106), Expect = 4e-15
Identities = 109/146 (75%), Gaps = 0/146 (0%)
Strand=Plus/Plus
Query 19358 CCTGAAATAGGTGATAAGTTTGCTTCTTTTACTGCTCAAAAAGGCACATGTGGTATGATT 19417
||| |||| ||||| || || |||||| | || |||||| || || |||||| |
Sbjct 270680 CCTCAAATCGGTGACAAATTCGCTTCTCGTCATGGTCAAAAGGGTACTATTGGTATCACA 270739
Query 19418 TATCGTCAAGAAGATATGCCTTTTACTAAAGATGGTATAGTGCCGGATCTTATTATTAAC 19477
|||||| |||||||||||| ||||| ||| ||||| || || ||| | ||||| ||
Sbjct 270740 TATCGTAGAGAAGATATGCCATTTACAGCAGAAGGTATCGTTCCAGATTTAATTATCAAT 270799
Query 19478 CCACATGCTTTTCCAAGTCGAATGAC 19503
|| |||||| ||||| ||| |||||
Sbjct 270800 CCTCATGCTATTCCATCTCGTATGAC 270825
>seq44
Length=117725
Score = 87.8 bits (96), Expect = 2e-12
Identities = 252/385 (65%), Gaps = 16/385 (4%)
Strand=Plus/Plus
Query 164605 AAAATTGTTAATGGTCCTGAATTATTGAACAAATATGTAGGTGAGTCAGAAGCTAATGTT 164664
|| |||||||| ||||||||| | || | || ||||| ||| ||||||| || |
Sbjct 80344 AAGATTGTTAACGGTCCTGAAGTTTTAAGTAAGTATGTTGGTTCCTCAGAAGAAAACATC 80403
Query 164665 AGAAAGTTGTTTCAGGAGGCTGAAGAAGAACAAAAGA--AAGCAGGTTTAGCTAGTAAAT 164722
| || || || | || || |||| |||| | ||| ||| || | | | |
Sbjct 80404 CGTAATTTATTCAAAGACGCAGAAGCAGAATACAAGGCCAAGGGGGATGAATC--TTCCT 80461
Query 164723 TACATGTTATTGTTTTTGATGAGATAGATGCTCTTTGCAAAAA---------ACGTGGTG 164773
||||| | || |||||||||| | ||| || ||| ||| | | | ||||
Sbjct 80462 TACATATCATCATTTTTGATGAACTGGATTCTGTTTTCAAGCAGAGAGGTTCAAGAGGTG 80521
Query 164774 ATAATATTATTCATGATG-CAGTG--GTTAATCAGTTGCTTTCTAAAATAGATGGTGTAG 164830
|| || | | | || || || |||||||| ||||| ||||||| || ||||| |
Sbjct 80522 ATGGTACTGGTGTAGGTGACAATGTAGTTAATCAATTGCTGGCTAAAATGGACGGTGTTG 80581
Query 164831 AATCCTTAAATAATATTTTAATTGTAGGTATGACCAACCGACCTGATTTAATTGATGATG 164890
| | |||||||| || | | |||||||||||||| ||||| || ||| ||
Sbjct 80582 ATCAACTGAATAATATATTGGTCATTGGTATGACCAACCGTAAAGATTTGATCGATATTG 80641
Query 164891 CTTTATTACGACCTGGTCGATTAGAATTGAAAATAGAAATAGGATTACCCGACAAAGAAG 164950
|| | ||||| || ||| |||| ||| | | | ||||| ||||| ||| || |||
Sbjct 80642 CTCTTTTACGTCCAGGTAGATTCGAAGTTCAGGTTGAAATTCATTTACCGGACGAAAAAG 80701
Query 164951 GACGCCTTCAAATTTTAAAAGTTCA 164975
| | || || ||||| || ||||
Sbjct 80702 GTAGACTGCAGATTTTTGAAATTCA 80726
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 595801299787200
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