Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_006639.1
Length=24748
Score E
Sequences producing significant alignments: (Bits) Value
seq47 122 1e-23
seq808 109 9e-20
seq246 95.1 2e-15
seq771 89.7 8e-14
seq1752 86.0 1e-12
seq2936 84.2 3e-12
>seq47
Length=114184
Score = 122 bits (134), Expect = 1e-23
Identities = 191/271 (70%), Gaps = 2/271 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
||||||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 79403 GCTAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 79345
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | ||||| | | ||||| ||||||||| |||| || || |||| ||||| |
Sbjct 79344 CAGAAGATTGGCTAGAAGAGGTGGTGTCAAGCGTATCTCCGGTTTAATCTACGAAGAAGT 79285
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| |||||| |||| | | |||| ||| || || | || || ||
Sbjct 79284 CAGAGCTGTCTTGAAGTCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACTGA 79225
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || | ||| | || ||||| ||||| | |||||
Sbjct 79224 ACACGCCAAGAGAAAGACTGTTACTTCTCTAGATGTTGTTTATGCTTTGAAGAGACAAGG 79165
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAATCT 16702
| | | |||||||| || ||||||||
Sbjct 79164 TAGAACCTTGTATGGTTTCGGTGGTTAATCT 79134
>seq808
Length=3382
Score = 109 bits (120), Expect = 9e-20
Identities = 187/269 (70%), Gaps = 2/269 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| || || |||||||||||
Sbjct 351 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATACAAGGTATTACTAAGCCAGCTAT 409
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 410 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 469
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | ||| ||||| |||| | | |||| ||| || || | || |||||
Sbjct 470 CAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATCAGAGACTCTGTTACTTACACCGA 529
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGATATCGTCTATGCATTGAAACGTCAAGG 16671
||||| || | |||||||| || || ||||| | || ||||| ||||| | |||||
Sbjct 530 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTTGTTTATGCTTTGAAGAGACAAGG 589
Query 16672 CCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
| | | || ||||| || ||||||
Sbjct 590 TAGAACCTTATACGGTTTCGGTGGTTAAT 618
>seq246
Length=24425
Score = 95.1 bits (104), Expect = 2e-15
Identities = 166/242 (69%), Gaps = 0/242 (0%)
Strand=Plus/Plus
Query 16458 GAGATAACATCCAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAG 16517
|||||||||| ||||| ||||| |||||||||||| | | ||||| | | ||||| |
Sbjct 2849 GAGATAACATTCAAGGTATCACTAAGCCAGCTATCAGAAGATTGGCTAGAAGAGGTGGTG 2908
Query 16518 TCAAGCGTGTCTCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCA 16577
|||||||| |||| || || |||| ||||| | | | ||| |||||| ||| |
Sbjct 2909 TCAAGCGTATCTCCGGTTTAATCTACGAAGAAGTCAGAGCTGTCTTGAAGTCCTTTTTGG 2968
Query 16578 AGACCGTTATCCATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCT 16637
| |||| ||| || || | || || || ||||| || | |||||||| || |
Sbjct 2969 AATCCGTCATCAGAGACTCTGTTACTTACACTGAACACGCCAAGAGAAAGACTGTTACTT 3028
Query 16638 CCATGGATATCGTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTT 16697
| | ||| | || || || ||||| | ||||| | | | || ||||| || |||
Sbjct 3029 CTCTAGATGTTGTTTACGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTT 3088
Query 16698 AA 16699
||
Sbjct 3089 AA 3090
>seq771
Length=3718
Score = 89.7 bits (98), Expect = 8e-14
Identities = 159/232 (69%), Gaps = 0/232 (0%)
Strand=Plus/Plus
Query 16469 CAAGGAATCACCAAGCCAGCTATCCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTC 16528
||||| || || |||||||||||| | | | ||| | | ||||| ||||||||| |
Sbjct 1 CAAGGTATTACTAAGCCAGCTATCAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATT 60
Query 16529 TCTGGATTGGTCTATGAAGAGATTCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATC 16588
||||| ||| |||| ||||| | | | ||| ||||| |||| | | |||| |||
Sbjct 61 TCTGGTTTGATCTACGAAGAAGTCAGAGCTGTCTTGAAATCCTTCTTGGAATCCGTCATC 120
Query 16589 CATGATGCTTTCCACTATACCGAGCACGCTAAACGTAAGACTGTCACCTCCATGGATATC 16648
|| || | || ||||| ||||| || | |||||||| || || ||||| |
Sbjct 121 AGAGACTCTGTTACTTACACCGAACACGCCAAGAGAAAGACTGTTACTTCTTTGGATGTT 180
Query 16649 GTCTATGCATTGAAACGTCAAGGCCGTAAGATTTATGGTTTTGGAAGTTAAT 16700
|| ||||| ||||| | ||||| | | | || ||||| || ||||||
Sbjct 181 GTTTATGCTTTGAAGAGACAAGGTAGAACCTTATACGGTTTCGGTGGTTAAT 232
>seq1752
Length=668
Score = 86.0 bits (94), Expect = 1e-12
Identities = 149/214 (70%), Gaps = 2/214 (1%)
Strand=Plus/Minus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||| ||||| ||||| |||||||||||
Sbjct 215 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATTCAAGGTATCACTAAGCCAGCTAT 157
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 156 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 97
Query 16552 TCGTGATGTTTTGAAGATCTTCCTCAAGACCGTTATCCATGATGCTTTCCACTATACCGA 16611
| | || ||||| |||| | | |||| ||| || || | || || ||
Sbjct 96 CAGAGCCGTCTTGAAATCCTTCTTGGAATCCGTCATCAGGGACTCTGTTACTTACACTGA 37
Query 16612 GCACGCTAAACGTAAGACTGTCACCTCCATGGAT 16645
||||| || | |||||||| || || |||||
Sbjct 36 ACACGCCAAGAGAAAGACTGTTACTTCTTTGGAT 3
>seq2936
Length=514
Score = 84.2 bits (92), Expect = 3e-12
Identities = 101/135 (75%), Gaps = 2/135 (1%)
Strand=Plus/Plus
Query 16433 GCTAAGCGTCATCGCA-GATCTCTTCGAGATAACATCCAAGGAATCACCAAGCCAGCTAT 16491
|| |||||||| | | ||| ||| |||||||||||||||| || || |||||||||||
Sbjct 352 GCCAAGCGTCACAGAAAGAT-TCTAAGAGATAACATCCAAGGTATTACTAAGCCAGCTAT 410
Query 16492 CCGTCGTCTGGCTCGTCGTGGTGGAGTCAAGCGTGTCTCTGGATTGGTCTATGAAGAGAT 16551
| | | | ||| | | ||||| ||||||||| | ||||| ||| |||| ||||| |
Sbjct 411 CAGAAGATTAGCTAGAAGAGGTGGTGTCAAGCGTATTTCTGGTTTGATCTACGAAGAAGT 470
Query 16552 TCGTGATGTTTTGAA 16566
| | ||| |||||
Sbjct 471 CAGAGCTGTCTTGAA 485
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 79066521397956
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |