Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_007151.1
Length=149622
Score E
Sequences producing significant alignments: (Bits) Value
seq4 123 2e-23
seq139 122 8e-23
seq90 118 1e-21
seq196 105 6e-18
seq7730 93.3 4e-14
>seq4
Length=403504
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || ||| | || | || ||
Sbjct 386762 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 386821
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||| ||||| || ||||| || |||
Sbjct 386822 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 386881
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946
|||||||| |||| | || || ||||| || |||| ||||| |||| |||||||
Sbjct 386882 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCA--GACTATA 386939
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||| ||||| || |||||| | || ||||| ||||||| ||||| ||
Sbjct 386940 ACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 386988
Score = 123 bits (136), Expect = 2e-23
Identities = 166/229 (72%), Gaps = 4/229 (2%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || || ||| | ||||| || | || ||| | || | || ||
Sbjct 386990 ATGCAAATCTTCGTCAAGACACTGACTGGTAAGACCATAACCTTAGAGGTCGAGTCTTCT 387049
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||||||||| | ||||| |||||| ||||| ||||| || ||||| || |||
Sbjct 387050 GACACCATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGGTATTCCTCCAGACCAA 387109
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA--ACGTCAGCGACTATA 26946
|||||||| |||| | || || ||||| || |||| ||||| |||| |||||||
Sbjct 387110 CAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAACTTTGTCA--GACTATA 387167
Query 26947 ACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|||| ||||| || |||||| | || ||||| ||||||| ||||| ||
Sbjct 387168 ACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGAGGTGG 387216
Score = 116 bits (128), Expect = 4e-21
Identities = 174/245 (71%), Gaps = 4/245 (2%)
Strand=Plus/Plus
Query 26753 TTTTTAGTCAAACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCAT 26812
|||| | | | ||| ||||| | || || || || || ||||| || | || || |
Sbjct 386518 TTTTAAATAAGACACTATGCAGATTTTCGTCAAGACTTTGACTGGTAAGACCATTACTTT 386577
Query 26813 CGAATTAGAATCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGG 26872
|| | || || |||||| ||||| | ||||| |||||| ||||| |||||
Sbjct 386578 GGAGGTCGAGTCCTCCGACACGATCGACAACGTCAAGTCCAAGATTCAAGACAAGGAAGG 386637
Query 26873 GATACCTCCCGATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAA- 26931
|| ||||| || ||||||||||| |||| | || || ||||| || |||| |||||
Sbjct 386638 TATTCCTCCAGACCAACAAAGACTGATTTTTGCTGGTAAGCAACTGGAGGATGGTAGAAC 386697
Query 26932 -ACGTCAGCGACTATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGA 26990
|||| ||||||||||| ||||| || |||||| | || ||||| ||||||| |||
Sbjct 386698 TTTGTCA--GACTATAACATCCAAAAGGAGTCTACTCTTCACTTGGTCTTGAGACTGAGA 386755
Query 26991 GGAGG 26995
|| ||
Sbjct 386756 GGTGG 386760
Score = 86.0 bits (94), Expect = 6e-12
Identities = 157/230 (68%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || ||||| || || | || || | || | || || |
Sbjct 387218 ATGCAGATTTTCGTCAAGACTTTAACCGGTAAGACCATTACTTTGGAGGTCGAGTCCTCC 387277
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| ||||| | || || ||||| || ||||| || || ||||| || |||
Sbjct 387278 GACACGATCGACAATGTAAAGAGTAAGATACAGGATAAAGAGGGCATTCCTCCGGACCAA 387337
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|| || | |||| | ||| || ||||| ||||| | |||| | |||||||||
Sbjct 387338 CAGAGGTTGATTTTTGCCGGTAAGCAACTGGAAGACGGCAGAACTTTGTCGGACTATAAC 387397
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGGAAA 26998
|||||||| || || ||| | || ||||||| ||||| ||||| || ||
Sbjct 387398 ATTCAAAAGGAGTCCACTCTGCACTTGGTCCTAAGACTAAGAGGTGGCAA 387447
>seq139
Length=48224
Score = 122 bits (134), Expect = 8e-23
Identities = 163/227 (72%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
|||||| | || || ||||| |||| || || | || ||| | || | ||||| |
Sbjct 32484 ATGCAAATTTTCGTCAAAACTCTAACAGGGAAGACTATAACCCTAGAGGTTGAATCTTCC 32543
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
||||| || || | |||||| || ||| ||||| ||||| || ||||| ||||||
Sbjct 32544 GACACTATTGACAACGTCAAAAGTAAAATTCAAGACAAGGAAGGTATTCCTCCAGATCAA 32603
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||| | |||| | ||| || ||||| ||||| | ||||| | | ||||| |||
Sbjct 32604 CAAAGATTGATTTTTGCCGGTAAGCAACTGGAAGACGGTAGAACCTTGTCTGACTACAAC 32663
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
|| ||||| ||||||||| | || |||| ||||| | ||||| ||
Sbjct 32664 ATCCAAAAGGAATCTACTCTTCACTTGGTGTTGAGATTGAGAGGTGG 32710
Score = 86.0 bits (94), Expect = 6e-12
Identities = 155/227 (68%), Gaps = 0/227 (0%)
Strand=Plus/Plus
Query 26769 ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAAC 26828
||||| | || || || || || || || ||| | || || | ||| | ||||| |
Sbjct 32028 ATGCAGATTTTCGTCAAGACTTTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCC 32087
Query 26829 GACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAA 26888
|| |||||||| | || || || ||| ||||| ||||| || ||||| ||||||
Sbjct 32088 GATACCATCGACAACGTTAAGTCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAA 32147
Query 26889 CAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAAC 26948
|||||| | || | | ||| || || || ||||| | ||||| | || || |||
Sbjct 32148 CAAAGATTGATCTTTGCCGGTAAGCAGCTAGAAGACGGTAGAACGCTGTCTGATTACAAC 32207
Query 26949 ATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| || || || || | ||||| || || || || ||||| ||
Sbjct 32208 ATTCAGAAGGAGTCCACCTTACATCTTGTGCTAAGGCTAAGAGGTGG 32254
>seq90
Length=74341
Score = 118 bits (130), Expect = 1e-21
Identities = 157/218 (72%), Gaps = 0/218 (0%)
Strand=Plus/Plus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
|| || || || || ||||| ||| | ||||| | ||| | ||||| ||||||||
Sbjct 34300 TTCGTTAAGACTTTGACTGGTAAAACCATCACTCTAGAAGTTGAATCTTCTGACACCATT 34359
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | |||||| |||||| ||||||||||| || || || || ||||||||| |
Sbjct 34360 GACAATGTCAAATCCAAGATTCAAGACAAAGAAGGTATCCCACCTGACCAACAAAGATTG 34419
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | |||||| |||||||||||
Sbjct 34420 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCCGACTACAACATTCAAAAG 34479
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | ||| | ||| ||||| | ||||| ||
Sbjct 34480 GAATCCACTTTACATTTAGTCTTGAGATTGAGAGGTGG 34517
>seq196
Length=33893
Score = 105 bits (116), Expect = 6e-18
Identities = 154/218 (71%), Gaps = 0/218 (0%)
Strand=Plus/Minus
Query 26778 TTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATC 26837
||||| || || || ||||| || | ||||| | ||| | ||||| ||||| ||
Sbjct 3445 TTTGTCAAGACTTTGACTGGTAAGACCATCACTTTGGAAGTTGAATCTTCTGACACTATT 3386
Query 26838 GAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTC 26897
|| | ||||| ||||||| ||||| ||||| || || || || ||||||||| |
Sbjct 3385 GACAATGTCAAGTCAAAGATTCAAGACAAGGAAGGTATCCCACCTGACCAACAAAGATTG 3326
Query 26898 ATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAA 26957
|| | | || || ||| | ||||| | ||||| | | ||||| ||||||||||||
Sbjct 3325 ATCTTTGCTGGTAAGCAATTGGAAGACGGTAGAACCTTGTCTGACTACAACATTCAAAAA 3266
Query 26958 GAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995
||||| ||| | || | ||| ||||| | ||||| ||
Sbjct 3265 GAATCCACTTTGCACTTAGTCTTGAGATTGAGAGGTGG 3228
>seq7730
Length=350
Score = 93.3 bits (102), Expect = 4e-14
Identities = 144/206 (70%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 26790 TTAACTGGAAAATCGATCACCATCGAATTAGAATCAAACGACACCATCGAGCAAGTCAAA 26849
|| || || ||| | || || | ||| | ||||| ||| |||||||| | || ||
Sbjct 2 TTGACCGGTAAAACCATAACATTGGAAGTTGAATCTTCCGATACCATCGACAACGTTAAG 61
Query 26850 CAAAAGATTACCGACAAAGAAGGGATACCTCCCGATCAACAAAGACTCATTTACGGCGGC 26909
|| ||| ||||| ||||| || ||||| |||||||||||| | || | | |||
Sbjct 62 TCGAAAATTCAAGACAAGGAAGGTATCCCTCCAGATCAACAAAGATTGATCTTTGCCGGT 121
Query 26910 AAACAACTCGAAGATGATAGAAACGTCAGCGACTATAACATTCAAAAAGAATCTACTATC 26969
|| || | ||||| | ||||| | | ||||| ||||| ||||| ||||||||| |
Sbjct 122 AAGCAGTTAGAAGACGGTAGAACCTTGTCTGACTACAACATCCAAAAGGAATCTACTCTT 181
Query 26970 CATCTGGTCCTGAGACTTAGAGGAGG 26995
|| |||| ||||| | ||||| ||
Sbjct 182 CACTTGGTGTTGAGATTGAGAGGTGG 207
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 478605606706240
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |