Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_008206.2 Length=78296 Score E Sequences producing significant alignments: (Bits) Value seq1 149 3e-31 >seq1 Length=1297082 Score = 149 bits (164), Expect = 3e-31 Identities = 227/322 (70%), Gaps = 6/322 (2%) Strand=Plus/Plus Query 49012 TCGGTAATCTGACCGCCGACCCCGAGCTGCGATTCACCCCGAGTGGCGCGGCTGTCGCAA 49071 |||| || || || | ||||| |||||||| |||||||| || ||||| || || | Sbjct 1125038 TCGGGAACCTCACGGGAGACCCGGAGCTGCGTTTCACCCCCTCGGGTGCGGCGGTGGCCA 1125097 Query 49072 ACTTCACGGTCGTGTCCAAT-----GACCGTTT-CCTCAAGGATGGGGAGTGGCAGGATA 49125 |||||||||| | ||||| |||| | || | || |||||| |||| Sbjct 1125098 ACTTCACGGTGGCGTCCACGCCGCGGACCTTCGACCGCCAGTCGAACGAGTGGAAGGACG 1125157 Query 49126 AGGACCCCGTGTTCCTCCGCTGCAACGTGTGGCGTGAGTACGCTGAGAACGTCGCTGAGT 49185 |||| || ||||| | |||||| | ||||| ||| ||| ||||||||||| |||| Sbjct 1125158 GGGACACCCTGTTCATGCGCTGCTCGATCTGGCGCGAGGCCGCGGAGAACGTCGCGGAGT 1125217 Query 49186 CGCTGACACGCGGCACCACCGTGATCGTCACCGGCAAGCTCTCGCAGCGGAACTTCGAGG 49245 ||||||| |||| ||| ||||| ||| ||| ||||| | |||| Sbjct 1125218 CGCTGACGAAGGGCATGCGCGTCATCGTGCAGGGCCGCCTCGTCCAGCGCTCGTACGAGA 1125277 Query 49246 ACCGCGAGGGGAACAAGCGCACCGTCGTGGAGCTGGAGGTCGATGAGATCGGACCCGCTC 49305 |||||||||| | |||||||||||||| |||||| |||| || |||||||| ||| | | Sbjct 1125278 CCCGCGAGGGGGAGAAGCGCACCGTCGTCGAGCTGCAGGTGGACGAGATCGGTCCCTCCC 1125337 Query 49306 TGCGTTTCGCCACGGCGAAGGT 49327 |||| | |||| | || ||||| Sbjct 1125338 TGCGCTACGCCTCTGCCAAGGT 1125359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 250393430197684