Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_008518.1
Length=174059
Score E
Sequences producing significant alignments: (Bits) Value
seq312 127 2e-24
seq292 127 2e-24
>seq312
Length=16270
Score = 127 bits (140), Expect = 2e-24
Identities = 485/748 (65%), Gaps = 34/748 (5%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||| ||||| || ||||| || |
Sbjct 941 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 1000
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
||| || || | ||| | | || || || | | | || || || ||| | ||
Sbjct 1001 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 1059
Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961
||| |||| ||| | ||| || || || || || | ||| || ||| || ||
Sbjct 1060 CGAAAGCAAC-----CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 1114
Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGAT 93018
| ||||| ||||| | | || |||| ||||| |||||| |||||| | | ||
Sbjct 1115 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 1171
Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTAC 93072
| | || || || | | |||| | || || || ||| |||||| || | |
Sbjct 1172 TTCCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTTC 1226
Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132
| || | ||| ||||| ||||||||||| || ||||||||||||| | |||||
Sbjct 1227 AA-ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAA 1285
Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192
|| ||| || |||||||| || | || |||| || || | ||| || || || ||
Sbjct 1286 TTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGC 1345
Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252
||| ||| || ||||| | |||||| | || ||||| || || | | ||| ||||
Sbjct 1346 AAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAA 1405
Query 93253 ATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAG 93311
||| | | || |||||| |||||||||| ||||| || | || |
Sbjct 1406 CAAGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTG 1464
Query 93312 GTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTAT 93371
| | || | || || || || | | | || | || | | || ||||| ||||
Sbjct 1465 GGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTAT 1524
Query 93372 CGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGA 93431
|||| |||| || || ||||||| || | ||| || || |||||||| |||||||
Sbjct 1525 CGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGA 1584
Query 93432 AACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGA 93491
||| | || || | || || ||||| || || | || || | |||||||| |
Sbjct 1585 AACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAA 1644
Query 93492 CTATACCATCGGATGCTGCaaaaaaaGC 93519
| ||||| || || || || ||||| ||
Sbjct 1645 CAATACCGTCAGAAGCGGCGAAAAAGGC 1672
>seq292
Length=18136
Score = 127 bits (140), Expect = 2e-24
Identities = 485/748 (65%), Gaps = 34/748 (5%)
Strand=Plus/Plus
Query 92790 CATAACACCACATTTTTGGTATTCCCCAACttttttttCAAAGAAATTTGTCTTTCCTTC 92849
|||||||||| |||||||| || |||| | ||||| ||||| || ||||| || |
Sbjct 3074 CATAACACCAGCCTTTTGGTAGTCAGAAACTCTCTTTTCGAAGAAGTTAGTCTTACCGGC 3133
Query 92850 CAAAGATATCGAATTCACT---AGTGATTGGATTCTTGGCGTTATAATA---CTTTTCAC 92903
||| || || | ||| | | || || || | | | || || || ||| | ||
Sbjct 3134 CAAGGAGAT-GTTTTCCATGAAATCGAAGGGGTTTTCGACCTTGTAGTATTTCTTGTTAC 3192
Query 92904 CGAT--CAACTCGTACAATAATCTATCAGCTACAAATTCTATGTACTGAGACATCAAATC 92961
||| |||| ||| | ||| || || || || || | ||| || ||| || ||
Sbjct 3193 CGAAAGCAAC-----CAACAGTCTGTCGGCGACGAACTCAACGTATTGGTTCATTAAGTC 3247
Query 92962 ACAATTCATTCCTAGAAGACGTACAGGTAGAGCGTCGGTCAAGAA--ATCTTTCT-CGAT 93018
| ||||| ||||| | | || |||| ||||| |||||| |||||| | | ||
Sbjct 3248 AGCGTTCATACCTAGCAAAGCAACTGGTAAGGCGTC---CAAGAAGTATCTTTGTTCAAT 3304
Query 93019 TACAACGGCTTCTTTCAAGATTTCTATTACTCTACTATT--TGG---TGGTTT-TTGTAC 93072
| | || || || | | |||| | || || || ||| |||||| || | |
Sbjct 3305 TTCCACAGCCTCGGTGACAATTTTT-----TCAACAATGGCTGGGTCTGGTTTGTTCTTC 3359
Query 93073 GACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATATCAA 93132
| || | ||| ||||| ||||||||||| || ||||||||||||| | |||||
Sbjct 3360 AA-ATGGGCGAACAACAAGCATGCAAAGTCGGTGTGCAAACCTTCGTCTCTACAGATCAA 3418
Query 93133 CTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTGAAGC 93192
|| ||| || |||||||| || | || |||| || || | ||| || || || ||
Sbjct 3419 TTCGTTGGAAAAGGTTAAACCGGGCATCATACCTCTCTTTTTCAACCAGAAAATGGAGGC 3478
Query 93193 AAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACGTTCGGCAAA 93252
||| ||| || ||||| | |||||| | || ||||| || || | | ||| ||||
Sbjct 3479 AAAGGAACCGGAGAAAAAGACACCTTCAATGGAGGCAAAGGCAACTAGTCTTTCACCAAA 3538
Query 93253 ATTTGCGGAATTACTGCTG-ATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAATACAAG 93311
||| | | || |||||| |||||||||| ||||| || | || |
Sbjct 3539 CAAGGCGTCA-GCGTCTTGAATCCATCTTAAAGCCCATTCGGCCTTCTCACCGATTTCTG 3597
Query 93312 GTAGTGTTTCGATAGCGTTAAATAGGTAATCTCGCTCGTCCGAATCTCGTATGTATGTAT 93371
| | || | || || || || | | | || | || | | || ||||| ||||
Sbjct 3598 GGATGGTGTGAATGGCATTGAACAAGAATTCACTTTCTTTAGGGTCCTTGATGTAGGTAT 3657
Query 93372 CGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGA 93431
|||| |||| || || ||||||| || | ||| || || |||||||| |||||||
Sbjct 3658 CGATCAACAAGGAGTAAGTTTCAGAGTGAATATTTTCAATCATGATTTGGAAACCGTAGA 3717
Query 93432 AACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGA 93491
||| | || || | || || ||||| || || | || || | |||||||| |
Sbjct 3718 AACTCTTTGCCTCTGGAATTTGGACTTCGGTGGAGAAGTTTTCAACCAAGTTTTCATTAA 3777
Query 93492 CTATACCATCGGATGCTGCaaaaaaaGC 93519
| ||||| || || || || ||||| ||
Sbjct 3778 CAATACCGTCAGAAGCGGCGAAAAAGGC 3805
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 556794728466080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |