Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_009816.1 Length=70579 Score E Sequences producing significant alignments: (Bits) Value seq9491 275 3e-69 >seq9491 Length=867449 Score = 275 bits (304), Expect = 3e-69 Identities = 668/996 (67%), Gaps = 32/996 (3%) Strand=Plus/Plus Query 59910 TCATCGAACATAAGGTAAGGATAGCCAGACTCAAACTGAACCTCTGCGATGGTCTGGAAC 59969 || |||||||| | ||| || ||||| ||||| ||||| | ||| ||||| |||||||| Sbjct 89752 TCCTCGAACATGATGTACGGGTAGCCGGACTCGAACTGGAGCTCGGCGATCGTCTGGAAG 89811 Query 59970 AGCTTTCGAGCGTCGATAAAGGTCTTAGCGATCCTATCATCTTTTAGCCACGTGTCGTAC 60029 | | || || | ||| ||||| ||| | || | | | | ||||||| Sbjct 89812 AAGTCGCGCGCCTTGATCTTCGTCTTGCGGATGCGCGAGTCGTCGACCATCTCGTCGTAC 89871 Query 60030 ATCTCGGTTACGGAGAACTCGGACAGTGACTTTCCGTACACCTTATTGATGTCATAAGGA 60089 ||||||| | |||| |||| | | ||| ||||| || | || ||| || || Sbjct 89872 TTCTCGGTGATCGAGATGTCGGCGAACGGCTTGCCGTAGACGCGCTCGACGTCGTACGGC 89931 Query 60090 GAGAATAGGGCCATAGGCTCGCTCTCCTTGGCAAGGCGGAACGTGACATCAGGAACGATA 60149 ||||| ||| ||| |||| ||| ||| || || |||||||| || || | | Sbjct 89932 GAGAAGAGGTACATGTCCTCGTTCTTCTTCGCGAGCTCGAACGTGATGTCCGGGATCACG 89991 Query 60150 ACTCCTAGGGAGAGAGTCTTAATACGGATCTTCTCGTCGGCGTTTTCACGCTTGGTATCC 60209 || || || || || ||||| || |||||||||||||| ||||| || |||||||| || Sbjct 89992 ACGCCGAGCGACAGCGTCTTGATGCGGATCTTCTCGTCCGCGTTCTCGCGCTTGGTGTCG 90051 Query 60210 AGGAACGCAAGGATGTCGGGGTGGTGTGCGTTCAAATATACCGCCCCTGCGCCCTGCCTT 60269 |||||| | ||||||||||||||| |||| || || || || || |||||||| | Sbjct 90052 AGGAACCGCATGATGTCGGGGTGGTGCGCGTGCAGGTACACGGCACCGGCGCCCTGGCGC 90111 Query 60270 GCACCCAGTTGGTTAGAGTAGGAGAAGCTATCTTCTAGAATCTTCATCACAGGGATGACT 60329 || || || ||||| | ||||||||| || || || | ||||||||| |||||||| Sbjct 90112 GCGCCGAGCTGGTTCGCGTAGGAGAACGAGTCCTCGAGCAGCTTCATCACGGGGATGACG 90171 Query 60330 CCAGAGGCCTGACCTTCTCGA--CCCTTAATCGGAGCTCCTGCCTCGCGGAGGTTGGAGA 60387 || || | ||| ||||||| ||| || || || || |||||||| ||| || | Sbjct 90172 CCGGACGACTG--GTTCTCGATGTGCTTGATGGGCGCGCCGTGCTCGCGGATGTTCGACA 90229 Query 60388 ATCCAATGCCGACTCCGCCACCACGCTTAGACAGCTGGAGAGAGTCCTGAACGATTCGAC 60447 | | |||| ||||| || ||||| || ||||| || | | | | | || Sbjct 90230 GGAGCAGGGCGACGCCGCCGCCGCGCTTGGAGAGCTGCAGCGCGGAGTTGATGCCGCGCG 90289 Query 60448 CGATGGACCCCATGGTGTCCTGAACATCGAGGATGAAGCATGATACTGGCTTGCCTGCGT 60507 |||||||| ||||| |||||| | || | |||||| || || |||| ||| ||| Sbjct 90290 CGATGGACTCCATGTTGTCCTCGATGCGCAGCAGGAAGCACGACACGGGCTCGCC-GCGC 90348 Query 60508 CGAGAAGCCCCG-CGTTGAGGAAGGTCGGAGTTGCAGGCTGGAAGATTCCCTTGATAATG 60566 | | ||| |||||||||| || || || || ||||||||| ||| || ||| Sbjct 90349 TGCGCCTTGCCGACGTTGAGGAACGTGGGGGTCGCGGGCTGGAAGCGGCCC--GA-GATG 90405 Query 60567 AGATCCACAAGGGACT-CAGCGTGCTCGAAGTCTTCGCTGTAGTGGATGGCCGTGAG-TA 60624 | ||| | | | | ||||| | | || | || || | || ||||| | | | Sbjct 90406 ACCTCCTCGACGATGTCCAGCGCG-GCCTGCTCGTTGCCGTCGGCGA-GGCCGAGCGCGA 90463 Query 60625 CC------ACTCGATCTTCGTAGCGCTCGTAATAGCGCTTGCCATCGTTAGTCTTCAAGG 60678 || || || || ||| |||||||| |||||||| || ||| ||||| | | Sbjct 90464 CCATGCAGACGCGGTCCTCGAAGCGCTCGAGGTAGCGCTTCCCGTCGAACGTCTTGAGCG 90523 Query 60679 CGTAGGAGTTATAGAACTTCAGCGCTCCCATGTAGGTCTTGAAGCGGAACTTGTGTCCGT 60738 ||| || | ||| |||| | || || | | | |||| |||||||||||| | ||| Sbjct 90524 TGTACGACGTGTAGTACTTGAAGGCGCCGAGGAACGTCTCGAAGCGGAACTTCTTCGCGT 90583 Query 60739 AGGCCTGTTTCATGAGTCTCTTTAGGTCCTCGAAGCCGTA----GCGAAGGACGACATCC 60794 |||| | | | ||| | | |||| | |||| ||| |||||| || Sbjct 90584 AGGCGAACTCGAACAACGACTTCACGAACTCGCGGTCGTACTTCGCG-AGGACG---GCC 90639 Query 60795 TTGTCCCA-TAGTTGGACTTCCTCTGTGAGGTGATCCACCTTCTCCTCTAGGGAGTGAAA 60853 ||| | || ||| | ||| ||||| |||| ||||||| | ||| ||| || Sbjct 90640 GGGTCGTAGTACTTG----TTCTCGACGAGGTAGTCCAGCTTCTCCGCGAGGTCGTGGAA 90695 Query 60854 GAATACGGTGTTCTTGTTGACGTGCTCCAGGAAGTA 60889 ||| |||||||||| ||||||||||| ||||||||| Sbjct 90696 GAAGACGGTGTTCTGGTTGACGTGCTGCAGGAAGTA 90731 Score = 158 bits (174), Expect = 5e-34 Identities = 288/417 (69%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 58400 GCAGCTTAGGCAACCTTCCACTTCCGTGCCTTCTA---CCGACTTAGCAGAGGTTCGGAT 58456 |||||| | |||||| || || |||||||| || | || || | | |||| ||||| Sbjct 88725 GCAGCTGACGCAACCCTCGACCTCCGTGCCCTCCAGGGCCATCTGA-CGGAGG--CGGAT 88781 Query 58457 GTAGTACAGAGACTTCAGGCCCTTCTTGTGAGCGTAGATCTGCGCTCGGTTAATGTCTCG 58516 |||||| || | ||| | |||||| |||||||||||||| ||||| | ||| || Sbjct 88782 GTAGTAGAGCGTCTTGATGCCCTTGCGCCACGCGTAGATCTGCGCGCGGTTGACGTCGCG 88841 Query 58517 CGTTGTCGCTGTATCTGGGAAGAACAGCGTGAGAGACATGCCCTGGTCTACCCAAGGAGA 58576 ||| || | || || ||||||||||||||| || |||||||| || | | Sbjct 88842 CGTCGTGACCGTGTCCTTGAAGAACAGCGTGAGGCTCAGACCCTGGTCGACGTGCTGCGT 88901 Query 58577 TGCTACAGCGTACATATCAATGATCGGGT--TAGGTCCGATAGCGTAAGCGCTATCAATT 58634 || | |||||| | || |||||| | ||| ||||| |||| ||| || Sbjct 88902 CGCGGCGGCGTACGTGTCGATGATCTTCTCGTAG--CCGATCTCGTACGCGTCCTCGTAG 88959 Query 58635 GATTCTACATTCTCATTGGTCACTCCGTACTGAGGGTAATAGACTCGACCAAGCTTACCC 58694 | || | || || || |||| | | ||||| ||||| || || | ||| ||| Sbjct 88960 TACTCGAGGTTGTCGTTCGTCAGGTAGGGCGCCGGGTAGTAGACGCGCCCGATCTTGCCC 89019 Query 58695 TCCTTGCGAACCTCAACAGGAGAGGTCACAGGGTGAATCGAGGCCGTGGCATGGTTAATG 58754 |||||||| | ||| | || | ||| ||||| ||||||| ||| | | ||| ||| Sbjct 89020 TCCTTGCGGATCTCGATCTTCGACGGCACCGGGTGGATCGAGGACGTCGAGTTGTTGATG 89079 Query 58755 TACGAGATAGAGCCGGTTGGTGGGATCGCCTGGAGGTTCTGGTTGTAAATACCATGC 58811 || ||||| ||||| || || |||| |||||||||||||||||||| || || ||| Sbjct 89080 TAGGAGATCGAGCCCGTCGGCGGGACGGCCTGGAGGTTCTGGTTGTAGATCCCGTGC 89136 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 225701886938480