Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_010811.2 Length=231255 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 >seq6 Length=371824 Score = 134 bits (148), Expect = 2e-26 Identities = 323/474 (68%), Gaps = 15/474 (3%) Strand=Plus/Plus Query 41617 GTGGGCGCAGGACTTCGCTCGGCAGAATCGTGCGGTGATGTTGCAGATCGTGATCCAAGC 41676 |||||||||||| | ||| || || ||||| ||| || | ||||| || | || Sbjct 98890 GTGGGCGCAGGAGTACGCGGCGCGCTCGCGCGCGGTCATGATGACGCTCGTGGTCGACGC 98949 Query 41677 GCTGCGT-CGTCATCTGCCGGCCTTCGAGCTGACG---GAAGAGGCGGTGAACTGCCACC 41732 |||| |||| | |||||| |||| | || || ||||| |||||| ||||| Sbjct 98950 CGTGCGCGCGTCGTTCCCCGGCCG-CGAGATCGCGTTCGACGAGGCCGTGAACGTCCACC 99008 Query 41733 ACAACTATTGTGAGCAGGAGAACCACTTCGGGC-GCAACGTGTGGGTCACGCGCAAGGGT 41791 ||||||| | | ||| || | ||| | | | | || | | || |||||||| Sbjct 99009 ACAACTACGTCGCGGTCGAGCACGTCGACGGCCAGGAGCTCGTCG-TGACCCGCAAGGGC 99067 Query 41792 GCGGTTCGTGCACGTGAAGA-CGATCTGGGGATCATTCCGGGATCCATGGGTACGAAGTC 41850 ||| | || || || |||| ||| || ||| |||| ||||| |||||||| || || Sbjct 99068 GCGATCCGGGC-CGGGAAGGGCGACCTCGGGCTCATCCCGGGGTCCATGGGCACCGGCTC 99126 Query 41851 GTACATCGT-CAAGGGCAAGGGCAATCCGCATTCGTACTGCTCGTGCAGT--CACGGGGC 41907 ||||||||| | |||| ||| || ||| | |||||||| ||| || || ||||| || Sbjct 99127 GTACATCGTGCGCGGGCTCGGG-AACCCGGAGTCGTACTGGTCG-GC-GTCGCACGGTGC 99183 Query 41908 AGGACGCCGTATGTCGCGCACCGAGGCCGTCAAGCGATTCACCGTCGAAGACCTCGTGCA 41967 || || || ||||||||||| |||| ||| ||||| |||| ||||||| Sbjct 99184 GGGCCGTCGCATGTCGCGCACGAAGGCGAAGAAGACCTTCACGCTCGACGACCTCGCCGC 99243 Query 41968 GCAGACGCAGGGTGTTGAATGCCCGAAGACCAAGGAAGTGCTGGATGAAATCCCGGCCGC 42027 |||||| || || || |||| ||| | | ||||| || || ||||||||||| Sbjct 99244 CCAGACGACCGGCGTGGAGTGCCGCAAGGACGCCGGGGTGCTCGACGAGATCCCGGCCGC 99303 Query 42028 GTACAAGGACATCGATCAGGTGATGCTTGACCAAAGCGATCTGGTGGAAGTCGT 42081 ||||||||| |||| |||| | | | ||| ||| || || || ||||| Sbjct 99304 CTACAAGGACCTCGACGAGGTCGTCCGCGCCCAGTCCGACCTCGTCGAGGTCGT 99357 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 739800212288800