Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_011183.1
Length=154641
Score E
Sequences producing significant alignments: (Bits) Value
seq8 134 1e-26
seq12 109 5e-19
seq38 105 7e-18
seq136 87.8 2e-12
>seq8
Length=326064
Score = 134 bits (148), Expect = 1e-26
Identities = 474/732 (65%), Gaps = 19/732 (3%)
Strand=Plus/Plus
Query 93907 TTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGACGAACAAGGCC 93966
|||||||| || || || ||| || ||||| || |||||| | | | | ||||
Sbjct 202418 TTCAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGAT 202477
Query 93967 GACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCTCAAAATACGCG 94026
|| ||||| || |||| ||| | | ||||| ||||| || || ||| ||
Sbjct 202478 GATTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCT 202537
Query 94027 GGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACATCCGCGGTACC 94086
|| || || || | | ||||| || | ||||| | || || ||||| |||||
Sbjct 202538 GGAGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACA 202597
Query 94087 AATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACGCGGCGCGCTAC 94146
|| || || || ||||| | | |||||| |||| ||||||||||| | || || ||
Sbjct 202598 AACGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTAT 202657
Query 94147 GTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCGAGCCCTGGCAC 94206
|| ||||| |||||| | ||| ||| | || || | ||| | ||||| ||||||
Sbjct 202658 GTTGACCAAGGTGGTAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCAC 202717
Query 94207 GCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATCTGGAGA---GG 94263
|| || | | ||||||||| | ||||||| ||||| || || || | |
Sbjct 202718 GCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGA---AGAAATCCGT 202774
Query 94264 GCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAACGCGTCGAGAAA 94323
|| ||||| | ||| ||||| ||||| ||||| ||||| ||||| || ||||| ||
Sbjct 202775 GCGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAA 202834
Query 94324 AACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTCCGACGTTTGTG 94381
||| | | |||| |||| || || || | || ||| || || ||| || |
Sbjct 202835 AACGGCACTTGGA--CTTTATTCTCTCCTACATCTGCCCCAGGCTTGAGTGACTGTTACG 202892
Query 94382 GATCGCGTTTTGAAGACTTGTATGCTCGTTACG-AATCGCAGGGCAAGGCCAGGAAGGTT 94440
| || |||| | | ||| | ||||||| || | ||| | | | ||| |
Sbjct 202893 GTGATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTG----GTAAGACT 202948
Query 94441 ATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGACGGGTACGCCC 94500
|| | || || | ||| | ||| |||| | ||| ||| || ||||| ||
Sbjct 202949 ATCAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACC- 203007
Query 94501 TACATCTTGTT--CAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACCTCGGGGTGA 94558
| | ||||| |||||| || ||| || |||||||| || || | || || |
Sbjct 203008 -ATTTGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTA 203066
Query 94559 TCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGACGAGATTGCTG 94618
||||| || ||| ||||| || ||||| || || || |||| || |||| |||||
Sbjct 203067 TCAAGTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTG 203126
Query 94619 TGTGTAACCTGG 94630
| |||||| |||
Sbjct 203127 TTTGTAACTTGG 203138
>seq12
Length=290010
Score = 109 bits (120), Expect = 5e-19
Identities = 472/737 (64%), Gaps = 17/737 (2%)
Strand=Plus/Minus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || || || || || || || || || || |||||||| |||||||||||
Sbjct 208125 CCCCCACACTATTTAATGCCGGTACGCCACATCCTCAAATGTCTTCTTGTTTCCTGATTG 208066
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||||||| || |||| ||||| | || || ||||| | || |
Sbjct 208065 CCATGAAGGACGACTCCATTGAAGGTATTTACGACACTTTGAAAGAGTGTGCCATGATTT 208006
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| || || || || | || | | || || | | ||| ||| || || || |
Sbjct 208005 CCAAGACTGCAGGTGGTGTTGGTCTTCATATCAACAATATTCGTTCCACAGGCTCTTATA 207946
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
| |||||||| || || || ||||| | | || ||| |||| ||||||||||||
Sbjct 207945 TTGCAGGTACCAACGGTACTTCAAACGGGTTGATTCCCATGATCCGTGTCTTCAACAACA 207886
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || ||||||||||| |||||| | ||| ||| | || || | | | |
Sbjct 207885 CTGCACGTTACGTGGACCAAGGTGGTAACAAGAGACCCGGTGCCTTTGCCCTTTTCTTGG 207826
Query 94196 AGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACGATC 94255
|||| ||||| || ||| | | || |||| | |||||| || || || ||
Sbjct 207825 AGCCATGGCATGCAGACATCTTCGACTTTGTCGATATCAGAAAGACTCATGGTAAGGA-- 207768
Query 94256 TGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312
|| | | || ||||| | ||| ||||| ||| | || || ||||| ||||| |
Sbjct 207767 -AGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCCGATCTTTTCATGAAGC 207709
Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTC-CCAATGAATGTCCC-GGACTGTC 94370
| ||||| | | ||||||| | || || || |||| || ||| || ||
Sbjct 207708 GTGTCGAAGAGGATGGGGCCTGGA--CCTTATTCTCACCAAGTGCTGCCCCAGGTTTGGA 207651
Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGCAGGGCAAGGC 94430
||||||||| || || ||||| | ||| | ||||||||| || | | | |
Sbjct 207650 CGACGTTTGGGGTGAAGAATTCGAAGAGCTATATACCCGTTACGAA----AGAGAAGGTC 207595
Query 94431 CAGG-AAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489
|| || || | ||| ||| | ||| | ||| || | | ||| || |
Sbjct 207594 GTGGTAAAACCATCAAGGCTCAAAAGGTATGGTACGCCATCTTGCAAGCACAAACAGAAA 207535
Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGA-CTCTGTCAACGCCAAGTCCAACCAGCAGCAC 94548
| ||||| |||| ||| | | ||||| |||| ||| ||| ||||||| ||| ||
Sbjct 207534 CCGGTACACCCTTCATGGTTTATAAGGATGCCTGT-AACAGAAAGACCAACCAACAGAAC 207476
Query 94549 CTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGGAC 94608
|| || ||||| || || |||| ||| || ||||||||| |||| || ||
Sbjct 207475 CTGGGTACCATCAAATCGTCAAACTTGTGTTGCGAAATCGTCGAGTATTCTTCCCCAGAT 207416
Query 94609 GAGATTGCTGTGTGTAA 94625
|| | |||||| |||||
Sbjct 207415 GAAACTGCTGTTTGTAA 207399
>seq38
Length=131761
Score = 105 bits (116), Expect = 7e-18
Identities = 287/437 (66%), Gaps = 7/437 (2%)
Strand=Plus/Plus
Query 93892 GCCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTG 93951
||| | || || ||||||| || || || || || || ||||| || |||||| ||
Sbjct 125430 GCCTCTCCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTG 125489
Query 93952 ATGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACC 94011
| | | |||| ||||| ||| || |||| ||||| | | ||||| |||||
Sbjct 125490 GTTGCCATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTG 125549
Query 94012 ATCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCC 94071
|| || ||| || || || || || | | |||| || | ||| | | |||||
Sbjct 125550 ATTTCCAAAACTGCTGGTGGTATTGGTCTACATATCCATAACATTCGTTCAACTGGTTCT 125609
Query 94072 TACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAAC 94131
||||| ||||| || || || || ||||| | | |||||| | || || |||||
Sbjct 125610 TACATTGCTGGTACAAACGGTACTTCTAACGGTTTAATTCCTATGATTCGTGTTTTCAAT 125669
Query 94132 AACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTAT 94191
||| | || || || || |||||||||||| | || ||| | || || | ||
Sbjct 125670 AACACTGCCCGTTATGTTGACCAGGGTGGTAATAAAAGACCTGGTGCGTTTGCCCTTTAC 125729
Query 94192 CTCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAAC 94251
|| || || ||||| || || | | ||| || || | | ||||||||||| ||
Sbjct 125730 CTGGAACCATGGCATGCTGATATATTTGATTTTATTGATATTAGGAAGAACCACGGTAAA 125789
Query 94252 GATCTGGAGA---GGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATG 94308
|| ||| | | || ||||| | ||| ||||| ||| | || || ||||| |||
Sbjct 125790 GA---GGAAATTCGTGCAAGAGATTTGTTCCCTGCTCTATGGATTCCTGATCTTTTCATG 125846
Query 94309 AAACGCGTCG-AGAAAA 94324
|| || |||| ||||||
Sbjct 125847 AAGCGTGTCGAAGAAAA 125863
>seq136
Length=48473
Score = 87.8 bits (96), Expect = 2e-12
Identities = 209/316 (66%), Gaps = 0/316 (0%)
Strand=Plus/Plus
Query 93896 CCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGATGA 93955
|||| || | |||||||| || || || || || |||||||| |||||| | ||
Sbjct 19390 CCCCAACTTTATTCAACGCTGGTACGCCACATCCTCAAATGTCTTCATGTTTCTTAATTG 19449
Query 93956 CGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCATCT 94015
| | |||| ||||| ||| || |||| || | | || || ||||| | || |
Sbjct 19450 CCATGAAGGATGACTCTATCGAAGGTATTTATGATACTTTGAAAGAATGTGCTATGATTT 19509
Query 94016 CAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCTACA 94075
| ||| || || || | || | | || || || | ||| ||| ||||| || |
Sbjct 19510 CCAAAACTGCAGGTGGTGTTGGTCTTCATATCAACAACATCCGTTCCACAGGTTCTTATA 19569
Query 94076 TCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACAACG 94135
|| |||||||| || || || ||||| | | |||||| | || || ||||| ||
Sbjct 19570 TCGCTGGTACCAACGGTACTTCAAACGGGTTGATTCCTATGATTCGTGTTTTCAATAATA 19629
Query 94136 CGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATCTCG 94195
| || || || ||||||||||||||| | ||| ||| ||||||| | | | |
Sbjct 19630 CTGCCCGTTATGTGGACCAGGGTGGTAACAAGAGACCTGGTGCTTTCGCCCTTTTCTTGG 19689
Query 94196 AGCCCTGGCACGCGGA 94211
|||| ||||| || ||
Sbjct 19690 AGCCATGGCATGCAGA 19705
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 494664501092320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |