Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_011272.1 Length=153894 Score E Sequences producing significant alignments: (Bits) Value seq17 120 3e-22 seq9491 87.8 2e-12 >seq17 Length=237104 Score = 120 bits (132), Expect = 3e-22 Identities = 116/147 (79%), Gaps = 4/147 (3%) Strand=Plus/Plus Query 112499 CGGCCCGGGCCGTGGCTCCGCCGGTGGCTCGCTGGTCACCTACGTCATGGGCATCACCTC 112558 |||||||||||||||||| |||| ||||| ||| | ||||| |||||||||||||| Sbjct 190498 CGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCATCACCGA 190557 Query 112559 GATCGACCCGATCAAGTACGACCTGATGTTCGAGCGCTTCATCAACCCGGACC--GCCCC 112616 | |||||||| | || ||| ||||| |||||||| ||| ||||||| || | | | Sbjct 190558 GCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCGTGTGTC 190617 Query 112617 GACTTCCCCGACATCGACGTCGACTTC 112643 || | |||||| |||||||||||||| Sbjct 190618 GA--TGCCCGACGTCGACGTCGACTTC 190642 >seq9491 Length=867449 Score = 87.8 bits (96), Expect = 2e-12 Identities = 72/85 (85%), Gaps = 2/85 (2%) Strand=Plus/Minus Query 89818 CGGGGTGTAGTTCAGTTTGGAAGAGCGCTTGGTTTGGGACCAAGATGTCGCAGGTTCGAA 89877 |||||||| | ||| |||| || |||||| ||| ||||| |||| ||||||||||| || Sbjct 798028 CGGGGTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACGAAGAGGTCGCAGGTTCAAA 797969 Query 89878 TCCTGTCACCCCGACTCAG-CGAGA 89901 ||||||||||||||| ||| ||||| Sbjct 797968 TCCTGTCACCCCGAC-CAGCCGAGA 797945 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 492274384713280