Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_011273.1 Length=164602 Score E Sequences producing significant alignments: (Bits) Value seq9491 890 0.0 seq1 407 2e-108 seq17 89.7 5e-13 seq2 82.4 8e-11 >seq9491 Length=867449 Score = 890 bits (986), Expect = 0.0 Identities = 767/946 (81%), Gaps = 10/946 (1%) Strand=Plus/Minus Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992 |||| |||||||||||||| | |||||||||||| ||||||||| |||| || Sbjct 88537 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 88478 Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052 | |||||||||||||| ||||| | |||||||| || ||| ||||||||||| || Sbjct 88477 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 88418 Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112 ||| |||| | | |||| | |||| ||||| || ||||||||||||||| |||||| Sbjct 88417 CGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGG 88358 Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172 |||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| ||||||| Sbjct 88357 ACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACG 88298 Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232 |||| |||||||||||||||||||||||||||||| |||||||| ||||||||| Sbjct 88297 AGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 88238 Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292 ||||||||||||||||||||||| |||||||||| |||||||||||||||||||| Sbjct 88237 CGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGG 88178 Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352 ||||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| | Sbjct 88177 AGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGC 88118 Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412 ||||||||||||||||||| ||||||||| ||| ||||| |||||| |||||||| Sbjct 88117 CGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCT 88058 Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472 |||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||| | Sbjct 88057 ACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 87998 Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532 |||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| | Sbjct 87997 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 87938 Query 156533 TGGAGAAGGAGACC---AAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGC 156589 | |||||| || ||| ||| | || ||||||| ||||| | ||||||| Sbjct 87937 TCGAGAAGCTCTCCCCGGAGGAGCGC---GACGAGCTCAAGGCGTACACGTTCGAGCTGC 87881 Query 156590 TGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCC 156649 | |||||||||| ||| |||||| | ||||||| ||||||||||||||| | ||| | Sbjct 87880 TCTTCGAGCTGTACGAGAACGAGGTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGC 87821 Query 156650 AGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGG 156709 |||||||||||| |||||||||||||||||||||| ||||||||| || |||||| | Sbjct 87820 TGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCG 87761 Query 156710 GCTACGACGCGCTGTTCAGCCGCAG--CGACTGCGACGTCAACCCGGCCATCCTGAGCGC 156767 ||||||| ||||| ||| || || ||| ||||||||||||||| ||||| || Sbjct 87760 GCTACGAGGCGCTCTTC--CCCAAGGACGAGACCGACGTCAACCCGGCGATCCTCTCGGC 87703 Query 156768 GCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGT 156827 ||||||||| | ||||||||||||||||||||||| ||||| ||| ||||||| Sbjct 87702 GCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGT 87643 Query 156828 CATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873 ||| | ||||| ||| |||||| ||||||||||||||||||||| Sbjct 87642 CATCGGCAAGGCCGTGAACACCGAGGACGACGACTGGGACTTCTGA 87597 >seq1 Length=1297082 Score = 407 bits (450), Expect = 2e-108 Identities = 351/435 (81%), Gaps = 0/435 (0%) Strand=Plus/Minus Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944 ||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || || Sbjct 232150 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 232091 Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004 ||| ||||||||||| ||||||||||||||||| | || ||||| || ||||||| Sbjct 232090 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCACGA 232031 Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064 ||||||||| || || |||||||||||| || | |||| ||| ||| || | || || Sbjct 232030 GGGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGTCCG 231971 Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124 || |||| |||||||||||| | ||||||||||| || | ||||||||||||||| Sbjct 231970 CACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTT 231911 Query 153125 CACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCA 153184 ||| ||| ||||| || || ||||||||||||||||||||||| ||||||||||| Sbjct 231910 CACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCA 231851 Query 153185 CAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGG 153244 ||||||||||||||||||||| ||||||| | ||| ||||||||||| |||||||| | Sbjct 231850 CAACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGC 231791 Query 153245 CTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCA 153304 | |||||| ||| |||| ||||| || || | |||||| |||||| ||||||||| Sbjct 231790 CGCCCAGGTCCTGACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCA 231731 Query 153305 GCTGCTGTCCGGGTA 153319 ||| |||||||| || Sbjct 231730 GCTCCTGTCCGGCTA 231716 >seq17 Length=237104 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 110993 CGGCCCTGGCCGTGGCTCCGGCGGCGGCTCGCTGGTGAACTACCTGCTGGGCATCACCTC 111052 |||||| ||||||||||| | || ||||| ||| |||||| ||||||||||| Sbjct 190498 CGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCATCACCGA 190557 Query 111053 GCTCGACCCGATCAAGTACGACCTGTCGTTCGAGCGGTTCATCAACCCCGACCG 111106 |||||||||| | || ||| ||| |||||||||||| |||||||||| || Sbjct 190558 GCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCG 190611 >seq2 Length=464139 Score = 82.4 bits (90), Expect = 8e-11 Identities = 63/75 (84%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674 ||||||| ||||||||||||||||||| ||||||||||| |||| || ||||||||| Sbjct 264230 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 264289 Query 92675 CCCACTCCCGCCACT 92689 || | ||||| ||| Sbjct 264290 CCTGCCCCCGCTACT 264304 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 526535919099840