Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_011273.1
Length=164602
Score E
Sequences producing significant alignments: (Bits) Value
seq9491 890 0.0
seq1 407 2e-108
seq17 89.7 5e-13
seq2 82.4 8e-11
>seq9491
Length=867449
Score = 890 bits (986), Expect = 0.0
Identities = 767/946 (81%), Gaps = 10/946 (1%)
Strand=Plus/Minus
Query 155933 GCGCCATCAACTGGAACCGCGTGATCGACGAGAAGGACGCGGAGGTGTGGAACCGGCTGA 155992
|||| |||||||||||||| | |||||||||||| ||||||||| |||| ||
Sbjct 88537 GCGCGATCAACTGGAACCGTCTCGAGGACGAGAAGGACCTCGAGGTGTGGGACCGCCTCG 88478
Query 155993 CCAACAACTTCTGGCTGCCGGAGAAGATCCCGGTGTCCAATGACGTCCAGTCGTGGCACC 156052
| |||||||||||||| ||||| | |||||||| || ||| ||||||||||| ||
Sbjct 88477 TCGGGAACTTCTGGCTGCCCGAGAAAGTGCCGGTGTCGAACGACATCCAGTCGTGGAACA 88418
Query 156053 AGCTGACCGAGGAAGAGCGCCTGATCACCATGCGGGTGTTCACCGGCCTGACGATGCTGG 156112
||| |||| | | |||| | |||| ||||| || ||||||||||||||| ||||||
Sbjct 88417 CGCTCACCGCGCAGGAGCAGGAGCTCACGATGCGCGTATTCACCGGCCTGACGCTGCTGG 88358
Query 156113 ACACCATCCAGGGCACCGTCGGCGCGGTCTCGCTCATCCCGGACGCCATCACCCCGCACG 156172
|||| ||||||||||| ||||||||||| ||||||||||| ||||| ||||| |||||||
Sbjct 88357 ACACGATCCAGGGCACGGTCGGCGCGGTGTCGCTCATCCCCGACGCGATCACGCCGCACG 88298
Query 156173 AGGAGGCGGTGTACACCAACATCGCGTTCATGGAGAGCGTGCACGCACGCAGCTACTCGA 156232
|||| |||||||||||||||||||||||||||||| |||||||| |||||||||
Sbjct 88297 AGGAAGCGGTGTACACCAACATCGCGTTCATGGAGTCGGTGCACGCCAAGAGCTACTCGT 88238
Query 156233 ACATCTTCTCGACGCTGTGCTCCACCAAGGAGATCGACGCCGCGTTCCGCTGGTCGGAGG 156292
||||||||||||||||||||||| |||||||||| ||||||||||||||||||||
Sbjct 88237 CGATCTTCTCGACGCTGTGCTCCACTCGTGAGATCGACGACGCGTTCCGCTGGTCGGAGG 88178
Query 156293 AGAACGCCAACCTGCAGAAGAAGGCTGAGATCGTGCTCAGCTACTACAACGGTGACGACC 156352
||||| | ||||| ||| ||||| |||||||| | ||||||||| || ||| |
Sbjct 88177 AGAACCCGAACCTCCAGCGCAAGGCCGAGATCGTCATGGACTACTACAAGGGCGACTCGC 88118
Query 156353 CGCTCAAGCGCAAGGTCGCCTCCACGCTGCTGGAGGGCTTCCTGTTCTACAGCGGCTTCT 156412
||||||||||||||||||| ||||||||| ||| ||||| |||||| ||||||||
Sbjct 88117 CGCTCAAGCGCAAGGTCGCGAGCACGCTGCTCGAGTCATTCCTCTTCTACTCCGGCTTCT 88058
Query 156413 ACCTGCCGATGTTCTGGTCGTCGCGAGGCAAGCTCACCAACACCGCCGACATGATCCGGC 156472
|||||||||||| |||||||||||| | |||||| || ||||| |||||| | ||||| |
Sbjct 88057 ACCTGCCGATGTACTGGTCGTCGCGCGCCAAGCTGACGAACACGGCCGACCTCATCCGCC 87998
Query 156473 TCATCATCCGGGACGAGGCCGTGCACGGCTACTACATCGGCTACAAGTTCCAGAAGGGCC 156532
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |
Sbjct 87997 TCATCATCCGCGACGAGGCCGTGCACGGGTACTACATCGGCTACAAGTTCCAGAAGGGTC 87938
Query 156533 TGGAGAAGGAGACC---AAGGCCCGCCAGCAGGAACTCAAGGACTACACCTATGAGCTGC 156589
| |||||| || ||| ||| | || ||||||| ||||| | |||||||
Sbjct 87937 TCGAGAAGCTCTCCCCGGAGGAGCGC---GACGAGCTCAAGGCGTACACGTTCGAGCTGC 87881
Query 156590 TGTTCGAGCTGTTCGACAACGAGCAGGAGTACACCCAGGACCTCTACGACGCCACCGGCC 156649
| |||||||||| ||| |||||| | ||||||| ||||||||||||||| | ||| |
Sbjct 87880 TCTTCGAGCTGTACGAGAACGAGGTGCAGTACACGGAGGACCTCTACGACGGCGTCGGGC 87821
Query 156650 AGACCGAGGACGTGAAGAAGTTCCTGCGGTACAACGGCAACAAGGCCCTGCAGAACCTGG 156709
|||||||||||| |||||||||||||||||||||| ||||||||| || |||||| |
Sbjct 87820 TGACCGAGGACGTCAAGAAGTTCCTGCGGTACAACGCCAACAAGGCGCTCATGAACCTCG 87761
Query 156710 GCTACGACGCGCTGTTCAGCCGCAG--CGACTGCGACGTCAACCCGGCCATCCTGAGCGC 156767
||||||| ||||| ||| || || ||| ||||||||||||||| ||||| ||
Sbjct 87760 GCTACGAGGCGCTCTTC--CCCAAGGACGAGACCGACGTCAACCCGGCGATCCTCTCGGC 87703
Query 156768 GCTGTCGCCCGGTGGAGACGAGAACCACGACTTCTTCTCGGGGTCGGGCAGCACGTACGT 156827
||||||||| | ||||||||||||||||||||||| ||||| ||| |||||||
Sbjct 87702 GCTGTCGCCGAACGCCGACGAGAACCACGACTTCTTCTCCGGGTCCGGCTCGTCGTACGT 87643
Query 156828 CATGGCCAAGGGTGTGGTCACCGAAGACGACGACTGGGACTTCTGA 156873
||| | ||||| ||| |||||| |||||||||||||||||||||
Sbjct 87642 CATCGGCAAGGCCGTGAACACCGAGGACGACGACTGGGACTTCTGA 87597
>seq1
Length=1297082
Score = 407 bits (450), Expect = 2e-108
Identities = 351/435 (81%), Gaps = 0/435 (0%)
Strand=Plus/Minus
Query 152885 CATCTTCGAGAGATTCACCGACCGCGCCCGTCGCGTCTGCGTCCTCGCCCAAGAGGAAGC 152944
||| |||||||||||||| ||||| |||||||| ||| |||||||||||| || || ||
Sbjct 232150 CATGTTCGAGAGATTCACAGACCGAGCCCGTCGGGTCGTCGTCCTCGCCCAGGAAGAGGC 232091
Query 152945 GCGCATGCTCAACCATGCGTACATCGGCACCGAGCATCTGCTGCTCGGGCTGGTCCACGA 153004
||| ||||||||||| ||||||||||||||||| | || ||||| || |||||||
Sbjct 232090 GCGGATGCTCAACCACAACTACATCGGCACCGAGCACATCCTCCTCGGCCTCATCCACGA 232031
Query 153005 GGGCGAGGGCGTAGCCGCCAAGGCGCTGCAGGCGCTCGACATCAACCTGGAGGAGGTGCG 153064
||||||||| || || |||||||||||| || | |||| ||| ||| || | || ||
Sbjct 232030 GGGCGAGGGTGTCGCGGCCAAGGCGCTGGAGTCCCTCGGGATCTCCCTCGACGGCGTCCG 231971
Query 153065 TGCCGAGGTCGAGGAGATCATCGGCCACGGCCAGCAGGCACCCACCGGGCACATCCCGTT 153124
|| |||| |||||||||||| | ||||||||||| || | |||||||||||||||
Sbjct 231970 CACCCAGGTGACCGAGATCATCGGCGAGGGCCAGCAGGCCCCGAGCGGGCACATCCCGTT 231911
Query 153125 CACCGACCGCTCCAAGCGCGTCCTGGAGCTGTCGCTGCGCGAGGCGCTGCAGCTCGGCCA 153184
||| ||| ||||| || || ||||||||||||||||||||||| |||||||||||
Sbjct 231910 CACGCCGCGCGCCAAGAAGGTGCTCGAGCTGTCGCTGCGCGAGGCGCTCCAGCTCGGCCA 231851
Query 153185 CAACTACATCGGCACCGAGCATCTCCTGCTGGCCCTGATCCGCGAGGGTGAGGGCGTGGG 153244
||||||||||||||||||||| ||||||| | ||| ||||||||||| |||||||| |
Sbjct 231850 CAACTACATCGGCACCGAGCACATCCTGCTCGGCCTCATCCGCGAGGGCGAGGGCGTCGC 231791
Query 153245 CTGCCAGGTGCTGGTGAAGCGCGGCGCGGAGCTGACCAAGGTCCGCCAGGTGGTCATCCA 153304
| |||||| ||| |||| ||||| || || | |||||| |||||| |||||||||
Sbjct 231790 CGCCCAGGTCCTGACGAAGATGGGCGCCGACCTCAACAAGGTGCGCCAGCAGGTCATCCA 231731
Query 153305 GCTGCTGTCCGGGTA 153319
||| |||||||| ||
Sbjct 231730 GCTCCTGTCCGGCTA 231716
>seq17
Length=237104
Score = 89.7 bits (98), Expect = 5e-13
Identities = 88/114 (77%), Gaps = 0/114 (0%)
Strand=Plus/Plus
Query 110993 CGGCCCTGGCCGTGGCTCCGGCGGCGGCTCGCTGGTGAACTACCTGCTGGGCATCACCTC 111052
|||||| ||||||||||| | || ||||| ||| |||||| |||||||||||
Sbjct 190498 CGGCCCGGGCCGTGGCTCGGCCGCGGGCTCCATGGCCTCCTACCTCATGGGCATCACCGA 190557
Query 111053 GCTCGACCCGATCAAGTACGACCTGTCGTTCGAGCGGTTCATCAACCCCGACCG 111106
|||||||||| | || ||| ||| |||||||||||| |||||||||| ||
Sbjct 190558 GCTCGACCCGCTGGAGCACGGGCTGATCTTCGAGCGGTTCCTCAACCCCGAGCG 190611
>seq2
Length=464139
Score = 82.4 bits (90), Expect = 8e-11
Identities = 63/75 (84%), Gaps = 0/75 (0%)
Strand=Plus/Plus
Query 92615 GCGGGGTAGAGCAGCTCGGTAGCTCGCCAGGCTCATAACCTGGAGGCCGTGGGTTCAAAT 92674
||||||| ||||||||||||||||||| ||||||||||| |||| || |||||||||
Sbjct 264230 GCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCAAAT 264289
Query 92675 CCCACTCCCGCCACT 92689
|| | ||||| |||
Sbjct 264290 CCTGCCCCCGCTACT 264304
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 526535919099840
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |