Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_011616.1
Length=148634
Score E
Sequences producing significant alignments: (Bits) Value
seq139 113 4e-20
seq4 84.2 2e-11
>seq139
Length=48224
Score = 113 bits (124), Expect = 4e-20
Identities = 153/211 (73%), Gaps = 2/211 (1%)
Strand=Plus/Minus
Query 126904 CACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTC 126963
||| | ||||| || ||||| || ||||| |||||||| || ||| | | || ||
Sbjct 32237 CACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTACCGTCTTC 32178
Query 126964 TAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGT 127023
|||||| || || || ||||||||| || ||||| ||||| || || ||||||||
Sbjct 32177 TAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTGTCTTG 32118
Query 127024 GATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTT 127082
|||||| ||| | ||||| ||| ||| || | | || ||||| | || | ||||
Sbjct 32117 AATTTTCGACTTAACGTTGT-CGATGGTATCGGAAGATTCAACTTCCAATGTTATGGTTT 32059
Query 127083 TGCCGGTCAGAGTTTTTACAAAAATCTGCAT 127113
| ||||||| ||| || || |||||||||||
Sbjct 32058 TACCGGTCAAAGTCTTGACGAAAATCTGCAT 32028
Score = 93.3 bits (102), Expect = 4e-14
Identities = 141/198 (71%), Gaps = 2/198 (1%)
Strand=Plus/Minus
Query 126917 GTAGACTCTTTTTGAATATTGTAATCGCCCATCGTGCGAGAATCGTCTAGCTGTTTTCCA 126976
|| ||||| |||||||||||||| || || ||| | | ||| ||||| || || ||
Sbjct 32908 GTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACCATCTTCTAGTTGCTTACCG 32849
Query 126977 GCGTAGATCAATCGCTGCTGATCGGGAGGTATGCCCTCCTTGTCCGTGATTTTCTGCTTG 127036
|| | ||||||| ||||| || ||||| || || |||||||| |||||| |||
Sbjct 32848 GCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTTGTCTTGAATTTTCGACTTA 32789
Query 127037 A-GTTGTTCGACGGTGTCCGTACTCTCGACTTCGACGGTCACCGTTTTGCCGGTCAGAGT 127095
| |||| || | ||||| | | || || || | ||| | || || || || |||||
Sbjct 32788 ACGTTG-TCAATAGTGTCGGAAGATTCAACCTCTAGGGTTATAGTCTTCCCTGTTAGAGT 32730
Query 127096 TTTTACAAAAATCTGCAT 127113
||| || ||||| |||||
Sbjct 32729 TTTGACGAAAATTTGCAT 32712
>seq4
Length=403504
Score = 84.2 bits (92), Expect = 2e-11
Identities = 165/241 (68%), Gaps = 5/241 (2%)
Strand=Plus/Minus
Query 126887 CCACCGCGTAATCGCAACACCAAATGTATCGTAGACTCTTTTTGAATATTGTAATCGCCC 126946
||||| | | || ||| ||||| || | |||||||| ||||| || || || || |
Sbjct 386760 CCACCTCTCAGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTCTGAC 386701
Query 126947 ATCGTGCGAGAATCGTCTAGCTGTTTTCCAGCGTAGATCAATCGCTGCTGATCGGGAGGT 127006
| || | | ||| || || || || ||||| | |||| || || || || |||||
Sbjct 386700 AAAGTTCTACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGA 386641
Query 127007 ATGCCCTCCTTGTCCGTGATTTTCTGCTTGA-GTTGTTCGACGGTGTCCGTACTCTCGAC 127065
|| || |||||||| || || ||||| ||||| ||| ||||| | ||||||
Sbjct 386640 ATACCTTCCTTGTCTTGAATCTTGGACTTGACGTTGT-CGATCGTGTCGGAGGACTCGAC 386582
Query 127066 TTCGACGGTCACCGTTTTGCCGGTCAGAGTTTTTACAAAAATCTGCA---TGGCTTATTT 127122
|| | || | || || || |||| ||| || || |||||||||| || |||||||
Sbjct 386581 CTCCAAAGTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCATAGTGTCTTATTT 386522
Query 127123 A 127123
|
Sbjct 386521 A 386521
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 475444381830080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |