Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_012639.1
Length=141291
Score E
Sequences producing significant alignments: (Bits) Value
seq139 131 2e-25
seq189 123 2e-23
seq12 116 3e-21
seq90 114 1e-20
seq4 111 1e-19
seq56 105 6e-18
seq7730 87.8 2e-12
seq72 84.2 2e-11
seq38 82.4 7e-11
>seq139
Length=48224
Score = 131 bits (144), Expect = 2e-25
Identities = 160/216 (74%), Gaps = 2/216 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| ||
Sbjct 32698 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 32639
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||| ||| || || || | ||||||| ||| || || || ||||| ||||| ||
Sbjct 32638 TCTTCCAGTTGCTTACCGGCAAAAATCAATCTTTGTTGATCTGGAGGAATACCTTCCTTG 32579
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||||||| ||||| || | || | ||||||||||| || || || || || |
Sbjct 32578 TCTTGAATTTTACTTTTGA-CGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTAT 32520
Query 45305 CGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 32519 AGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32484
Score = 123 bits (136), Expect = 2e-23
Identities = 159/217 (73%), Gaps = 2/217 (1%)
Strand=Plus/Minus
Query 45125 CCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGA 45184
|||||| || || || || || || |||||||| ||||| || || | ||| ||
Sbjct 32927 CCTCAAGACAAGGTGAAGAGTGGACTCCTTTTGAATATTGTAGTCCGACAGCGTTCTACC 32868
Query 45185 ATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTT 45244
||| || | ||| || || || | ||||||| ||||||||| || ||||| ||||| ||
Sbjct 32867 ATCTTCTAGTTGCTTACCGGCAAAAATCAATCTTTGCTGGTCTGGAGGAATACCTTCCTT 32808
Query 45245 ATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAA 45303
||||||| |||| | | | || | || | ||||||||||| || || || || || |
Sbjct 32807 GTCTTGAA-TTTTCGACTTAACGTTGTCAATAGTGTCGGAAGATTCAACCTCTAGGGTTA 32749
Query 45304 CCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| || || ||||||||||| || |||||||||||
Sbjct 32748 TAGTCTTCCCTGTTAGAGTTTTGACGAAAATTTGCAT 32712
Score = 86.0 bits (94), Expect = 6e-12
Identities = 152/219 (69%), Gaps = 2/219 (1%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTA 45182
||||| | ||| ||||| | || || ||||| || || || ||||| | ||| ||
Sbjct 32245 AGCCTTAGCACAAGATGTAAGGTGGACTCCTTCTGAATGTTGTAATCAGACAGCGTTCTA 32186
Query 45183 GAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCT 45242
|| || | || || || || | ||||||| ||| || || || || || |||||
Sbjct 32185 CCGTCTTCTAGCTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCC 32126
Query 45243 TTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGT 45301
|| ||||||| |||| | | | || | || | ||| |||||||| || ||||| | ||
Sbjct 32125 TTGTCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGT 32067
Query 45302 AACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
| ||||| ||||| | ||| || || ||||| |||||
Sbjct 32066 TATGGTTTTACCGGTCAAAGTCTTGACGAAAATCTGCAT 32028
>seq189
Length=35770
Score = 123 bits (136), Expect = 2e-23
Identities = 157/216 (73%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || || || |||||||||||||| || || ||| | ||| || |
Sbjct 27467 CTCAAGACCAAGTGTAGAGTAGATTCCTTTTGGATGTTGTAGTCGGACAAAGTTCTACCA 27526
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 27527 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 27586
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 27587 TCTTGGATCTTGGACTTGACATTGTCAATAGTGTCAGAAGATTCAACTTCCAGGGTAATA 27646
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 27647 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 27682
>seq12
Length=290010
Score = 116 bits (128), Expect = 3e-21
Identities = 150/207 (72%), Gaps = 0/207 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||||||||| || || | |||| ||
Sbjct 42426 CTCAAAACTAAATGTAAAGTGGATTCCTTTTGGATATTGTAGTCAGACAAGGTTCTACCG 42367
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | || |||| ||| ||||| || ||||| ||||| ||
Sbjct 42366 TCTTCCAATTGCTTACCAGCAAAGATTAATCTTTGTTGGTCAGGAGGAATACCTTCCTTG 42307
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| ||| |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 42306 TCTTGAATCTTTGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 42247
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAA 45332
|| || || || | |||||| ||||||
Sbjct 42246 GTCTTACCAGTCAAAGTTTTGACAAAA 42220
>seq90
Length=74341
Score = 114 bits (126), Expect = 1e-20
Identities = 149/206 (72%), Gaps = 0/206 (0%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| |||| ||| | || ||||||||||| || || || ||| | |||| ||
Sbjct 34505 CTCAAGACTAAATGTAAAGTGGATTCCTTTTGAATGTTGTAGTCGGACAAGGTTCTACCG 34446
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||||||
Sbjct 34445 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCTTTG 34386
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || ||||| || | |||||| ||||| || ||||| ||||| |
Sbjct 34385 TCTTGAATCTTGGATTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCTAGAGTGATG 34326
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
||||| || || | ||| || || ||
Sbjct 34325 GTTTTACCAGTCAAAGTCTTAACGAA 34300
>seq4
Length=403504
Score = 111 bits (122), Expect = 1e-19
Identities = 160/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGAC--GGTTT 45180
|| ||||| || | || || || || ||||||||||| ||||| | ||||| |||
Sbjct 386751 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGT--CTGACAAAGTTC 386694
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
|| ||| |||| ||| || || || | |||| || ||| ||||| || ||||| ||||
Sbjct 386693 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 386634
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || |||||||| || |||| || | || | |||||||| |||||||| || | |
Sbjct 386633 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATCGTGTCGGAGGACTCGACCTCCAAA 386575
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|||| || || || || | ||| || || ||||| |||||
Sbjct 386574 GTAATGGTCTTACCAGTCAAAGTCTTGACGAAAATCTGCAT 386534
Score = 107 bits (118), Expect = 2e-18
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACG--GTTT 45180
|| ||||| || | || || || || ||||||||||| ||||| || |||| |||
Sbjct 386979 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC--TGACAAAGTTC 386922
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
|| ||| |||| ||| || || || | |||| || ||| ||||| || ||||| ||||
Sbjct 386921 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 386862
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || |||||||| || |||| || | || | |||||| ||||||||||| || |
Sbjct 386861 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 386803
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | || || || || || || || || || ||||||||
Sbjct 386802 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386762
Score = 107 bits (118), Expect = 2e-18
Identities = 159/221 (72%), Gaps = 6/221 (3%)
Strand=Plus/Minus
Query 45123 AGCCTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACG--GTTT 45180
|| ||||| || | || || || || ||||||||||| ||||| || |||| |||
Sbjct 387207 AGTCTCAAGACCAAGTGAAGAGTAGACTCCTTTTGGATGTTATAGTC--TGACAAAGTTC 387150
Query 45181 TAGAATCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTT 45240
|| ||| |||| ||| || || || | |||| || ||| ||||| || ||||| ||||
Sbjct 387149 TACCATCCTCCAGTTGCTTACCAGCAAAAATCAGTCTTTGTTGGTCTGGAGGAATACCTT 387090
Query 45241 CTTTATCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGA 45299
| || |||||||| || |||| || | || | |||||| ||||||||||| || |
Sbjct 387089 CCTTGTCTTGAATCTTGGACTTGA-CGTTGTCGATGGTGTCAGAAGACTCGACCTCTAAG 387031
Query 45300 GTAACCGTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCAT 45340
|| | || || || || || || || || || ||||||||
Sbjct 387030 GTTATGGTCTTACCAGTCAGTGTCTTGACGAAGATTTGCAT 386990
>seq56
Length=105907
Score = 105 bits (116), Expect = 6e-18
Identities = 153/216 (71%), Gaps = 0/216 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | || | || || ||||||||||| || || || | ||| |
Sbjct 95193 CTCAAAACCAAGTGTAAAGTGGACTCCTTTTGGATGTTGTAGTCAGACAAAGTTCTGCCG 95252
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || ||||| ||||| ||
Sbjct 95253 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGAATACCTTCCTTG 95312
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
|||||||| || |||| || | ||||| ||||| || ||||| || ||||
Sbjct 95313 TCTTGAATCTTAGACTTGACATTGTCAATAGTGTCTGAAGATTCAACTTCAAGGGTAATA 95372
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAAAATTTGCATC 45341
|| || ||||||| ||| || || ||||||||||||
Sbjct 95373 GTCTTACCGGTTAAAGTCTTGACGAAAATTTGCATC 95408
>seq7730
Length=350
Score = 87.8 bits (96), Expect = 2e-12
Identities = 136/192 (71%), Gaps = 2/192 (1%)
Strand=Plus/Minus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
|||||||| | || || || |||||||||||||| || || || | |||| ||
Sbjct 195 CTCAACACCAAGTGAAGAGTAGATTCCTTTTGGATGTTGTAGTCAGACAAGGTTCTACCG 136
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| || || || || || || | ||||||| ||| || || || || || ||||| ||
Sbjct 135 TCTTCTAACTGCTTACCGGCAAAGATCAATCTTTGTTGATCTGGAGGGATACCTTCCTTG 76
Query 45246 TCTTGAATTTTTTGTTTGATCGCT-TCTACGGTGTCGGAAGACTCGACTTCGAGAGTAAC 45304
||||||| |||| | | | || | || | ||| |||||||| || ||||| | || |
Sbjct 75 TCTTGAA-TTTTCGACTTAACGTTGTCGATGGTATCGGAAGATTCAACTTCCAATGTTAT 17
Query 45305 CGTTTTGCCGGT 45316
||||| |||||
Sbjct 16 GGTTTTACCGGT 5
>seq72
Length=89915
Score = 84.2 bits (92), Expect = 2e-11
Identities = 142/206 (69%), Gaps = 0/206 (0%)
Strand=Plus/Plus
Query 45126 CTCAACACTAGATGCAGCGTTGATTCCTTTTGGATATTATAATCGCTGACGGTTTTAGAA 45185
||||| || | ||| | || |||||||||||||| || || || | ||| ||
Sbjct 61352 CTCAAGACCAAATGTAAAGTGGATTCCTTTTGGATGTTGTAGTCAGATAGAGTTCTACCG 61411
Query 45186 TCGTCCAATTGTTTTCCTGCGTATATCAATCGTTGCTGGTCCGGCGGAATGCCTTCTTTA 45245
|| |||||||| || || || | ||||||| ||| ||||| || || || ||||| ||
Sbjct 61412 TCTTCCAATTGCTTACCAGCAAAGATCAATCTTTGTTGGTCAGGTGGGATACCTTCCTTG 61471
Query 45246 TCTTGAATTTTTTGTTTGATCGCTTCTACGGTGTCGGAAGACTCGACTTCGAGAGTAACC 45305
||||| || || |||| || | |||||| ||||| || ||||| | ||| |
Sbjct 61472 TCTTGGATCTTGGACTTGACATTGTCAATGGTGTCAGAAGATTCAACTTCCAAAGTGATG 61531
Query 45306 GTTTTGCCGGTTAGAGTTTTTACAAA 45331
|| || || || | ||| || || ||
Sbjct 61532 GTCTTACCAGTCAAAGTCTTAACGAA 61557
>seq38
Length=131761
Score = 82.4 bits (90), Expect = 7e-11
Identities = 200/303 (66%), Gaps = 0/303 (0%)
Strand=Plus/Plus
Query 122841 TACAAATATTTTGGATACAAAACGTTAGAAAACGGATATTTGaaaaaaaTCGAGGAAAAG 122900
|||| |||||||| | ||||| || ||| ||||| || |||| | | |
Sbjct 125256 TACAGTTATTTTGGTTTTAAAACTTTGGAACGTTCTTATTTACTAAGAATCAACGGTCAA 125315
Query 122901 GTCGCCGAACGTATTCAACATATGCTCATGCGCGTCGCTATAGGCGTGCACGGACGCGAC 122960
|| ||||||||| |||||| | | ||| | ||||| ||||| | ||||| | ||
Sbjct 125316 GTGGCCGAACGTCCACAACATTTAATTATGAGAGTCGCACTAGGCATCCACGGTAGAGAT 125375
Query 122961 ATCGAAAACGCGACCGAAACTTACGATTTGATGTCTCAAAAATTTTTCACGCACGCGAGT 123020
||||| || ||||| || | |||||||||| ||||| ||| || ||||| |
Sbjct 125376 ATCGAGGCTGCTTTAGAAACGTATAACTTGATGTCTCTAAAATATTTTACTCACGCCTCT 125435
Query 123021 CCCACTTTGTTCGCCGCCGGCACGAAGTTGCCTCAGTTGTCTTCGTGTTTTTTGCTCACC 123080
|| || |||||| ||||| || ||||| |||| || ||||| ||| | ||
Sbjct 125436 CCAACGTTGTTCAATGCCGGTACTCCAAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCC 125495
Query 123081 TTGCGCGAAGACAGCATCACCGGTATCTATGAAACTTTGCGCGATTGCGCGTTGATTTCC 123140
|| || ||| ||| || || || || || ||| || || || |||||||||
Sbjct 125496 ATGAAGGAGGACTCTATCGAGGGGATTTACGACACCTTGAAGGAATGTGCTTTGATTTCC 125555
Query 123141 AAA 123143
|||
Sbjct 125556 AAA 125558
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 451949569820320
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