Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq38 183 4e-41 seq8 170 2e-37 seq13 86.0 8e-12 >seq38 Length=131761 Score = 183 bits (202), Expect = 4e-41 Identities = 829/1301 (64%), Gaps = 36/1301 (3%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || || |||| ||| ||| || || || ||||| | |||||| ||||||| |||||| Sbjct 126715 TACATATTGGAAGTGACTGGTTCGAAACATTCATTATAACCCAATATTTGGGATGTGGAT 126656 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATG-CGTTC 116021 || || ||||| ||||||||| | | || | | ||| | | | || | || Sbjct 126655 GCAGTAGGCATTGGTGCCATGGTCAAGGAATTTCTAATACCATGCTTCATGATATCTTTT 126596 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 ||| ||| |||||| || | || | | | ||||||||||||||||| || Sbjct 126595 CTTAAGGT-GTCCCAATCCCACATGCCGTAGGGTTTTTGGTCCCACATATCAAACTGTAG 126537 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || ||||| | || || || ||||| || || || || | Sbjct 126536 TATACCTTGAGAAGCAGGAGATCCTTGGAAAGTTTCGTATGGACCGTCCTTCTGAGCTAG 126477 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATTGC 116201 ||| | || || | || || ||||| || || ||||| || | ||| | Sbjct 126476 TTCACAAGAAGCTTCCATGGAGGCATGATAAATAGTTTCAAAGATTTGGATATTTAGCAA 126417 Query 116202 CTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCTTG 116261 ||| || || |||||||| | | ||| ||| || || || ||||||||||| Sbjct 126416 ACGGGCTTCCTCAGAATCAAATGGCAAACGTAACAGCATGAAAGTGTCAGCGAGACCTTG 126357 Query 116262 GACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATA 116321 ||||| | ||||||| | |||||||||||| || |||| || || || || || Sbjct 126356 AACACCCAAAGCAATTGGTCTATGTCTCATATTGGATTTTCTCGCTTCTTCAACAGGGTA 126297 Query 116322 AAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAG 116381 |||| | ||| || || || |||| ||| || ||||| || | |||||||| | Sbjct 126296 GTAATTACGATCAATGACTCTGTTTAAATTACGAGTAACAACTTTAGCAATTTCATGTAA 126237 Query 116382 CTTTTCGTAATCAAAACTGCGAGTCT---------------CTTCATTGACATACTTAGG 116426 |||| | | | | || ||||| |||| ||| || || || Sbjct 126236 TTTTTTGAAGTTGTATGTGGAAGTCTTACCATCCTCAGAAGTTTCAATGA-ATGCT--GG 126180 Query 116427 AAGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAAT 116486 | ||| | || |||| ||||| |||| || ||||| | | | ||| || | ||| Sbjct 126179 TAAGGCAACGGAAGCCAAGTTACAAACAGCAGTTTCATCTGGAGCTGAGTATTCAACAAT 126120 Query 116487 TTCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTT 116546 ||| || || ||||| ||| ||| || ||||| |||||||| || ||| |||| Sbjct 126119 TTCACAGCATAAGTTTGATGACTTGATGACACCTAAGTTTTTTTGATTAGATTTTCTGTT 126060 Query 116547 ACACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGC 116606 ||| ||||||||||| | | | || || || || || ||||| | | | ||| | Sbjct 126059 ACAAGCATCCTTGTAAACAACGAAAGGTGTACCAGTTTCAGTTTGAGCTTCCAAAATGGA 126000 Query 116607 CTTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGT 116666 | ||||| | |||| | ||| || | || || || | |||||| || Sbjct 125999 ATACCATAATTTTTGGGCTTTGATAGT---CTTACCACGACCTTCTTTCTCGTAGCGGGT 125943 Query 116667 GTAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTAT-CTGG 116723 || || ||||||||||| ||||| ||| | || | | || || | || || ||| Sbjct 125942 ATATAGAGCCTCAAACTCGTCACCGTAACAATCGCTTAAA--CCAGGAG-CTGATGTTGG 125886 Query 116724 ACAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCA 116783 | |||| | | ||| ||| || || || ||||||||||| || || || ||||| Sbjct 125885 AGAGAATAATGTCCAGGTCCCATTTTCTTCGACACGCTTCATGAAAAGATCAGGAATCCA 125826 Query 116784 GAGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTC 116843 || || | ||| | ||| | ||| ||| || | || || || | | || Sbjct 125825 TAGAGCAGGGAACAAATCTCTTGCACGAATTTCCTCTTTACCGTGGTTCTTCCTAATATC 125766 Query 116844 CAAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-ACC---CCT 116899 | ||| || | ||||| || ||||| ||||||||||| | || | | ||| || Sbjct 125765 AATAAAATCAAATATATCAGCATGCCATGGTTCCAGGTAAAGGGCAAACGCACCAGGTCT 125706 Query 116900 TGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGAA 116959 | | |||| |||||| ||||| | || || || || || |||| ||| |||| Sbjct 125705 T-TTATTACCACCCTGGTCAACATAACGGGCAGTGTTATTGAAAACACGAATCATAGGAA 125647 Query 116960 TGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAG-ACTTGTTGGCTCTGACATCG 117018 | | ||| | ||| || ||||| || ||| || || ||| | | | | Sbjct 125646 TTAAACCGTTAGAAGTACCGTTTGTACCAGCAATGTAAGAACCAGTT-GAACGAATGTTA 125588 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | || Sbjct 125587 TGGATATGTAGACCAATACCACCAGCAGTTTTGGAAATCAAAGCACATTCCTTCAAGGTG 125528 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| ||||| ||||| ||||| |||| | || | | ||| || |||||||| Sbjct 125527 TCGTAAATCCCCTCGATAGAGTCCTCCTTCATGGCAACCAAGAAACAAGAGGACATTTGA 125468 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTG 117179 || |||| ||||| || ||||| | ||||| | ||||| Sbjct 125467 GGTTTTGGAGTACCGGCATTGAACAACGTTGGAGAGGCGTG 125427 >seq8 Length=326064 Score = 170 bits (188), Expect = 2e-37 Identities = 820/1292 (63%), Gaps = 34/1292 (3%) Strand=Plus/Minus Query 115902 ATAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGA 115961 ||| ||||||| || ||| || || ||||| |||| ||| ||||| || | |||||| Sbjct 203689 ATACATGTTGGAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGA 203630 Query 115962 GGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTC 116021 || || ||||| ||||||||| | ||| | | ||| | || | ||| | Sbjct 203629 TGCAGTAGGCATAGGTGCCATGGTCAAAGAGTTTCTAATACCATGCTCCATGATGTTATT 203570 Query 116022 CTTGAGGGCGTCCCAGTCGTAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGAG 116081 | || | |||||| || | | | || | |||||||| || || || || Sbjct 203569 TCTCAGAGTGTCCCAATCCCACATACCGTATGGTTTTTGGTCCCACATGTCGAATTGAAG 203510 Query 116082 GATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCAA 116141 |||||||| || || || || || | ||| || || |||||||| || | || || Sbjct 203509 TATACCTTGAGAAGCCGGGGAGCCTTTAAAGGTTTCGTATGGGCCATCTCTTTGAGCTAA 203450 Query 116142 TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT-- 116199 ||| | || || | || || || || || || || || || || ||| | | Sbjct 203449 TTCACAAGAAGCTTCCATGGAGGCATGGTAGATAGTTTCGAAGATTTGAATATTTAGTAA 203390 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCACAAAATAAATACATCCGCGAGACCT 116259 || | || || || || || || | | ||| |||| || || || || | |||| Sbjct 203389 GCGT--GCTTCTTCTGAGTCGAATGGCAAACGCAACAACATGAAAGTGTCAGCCAAACCT 203332 Query 116260 TGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGA 116319 |||||||| | |||| || | ||||||||||||||| ||| || ||| || ||| Sbjct 203331 TGGACACCCAAAGCAATCGGCCTATGTCTCATATTAGATCTTCTTGCTTCCTCGACAGGA 203272 Query 116320 TAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGA 116379 ||| | || | || ||||| | |||| || || | ||| || | |||||||| Sbjct 203271 TAATAGTTACGGTCAATAACGTTGTTTAAGTTACGAGTAATAACTTTAGAAATTTCATGT 203212 Query 116380 AGCTTTTCGTAATCAAAACTGCGAGTCT------CTTCA----TTGACATACTTA--GGA 116427 ||||||| | | | | | ||| | ||||| || ||| | || Sbjct 203211 AGCTTTTTGAAGTTGTATGTAGAAGTTTTGCCGTCTTCAGATGTTTCAATAAATGCTGGC 203152 Query 116428 AGGGCGATTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATT 116487 | || | || |||| ||||| |||| |||||||| | ||| ||| || | |||| Sbjct 203151 AAAGCAACAGAAGCCAAGTTACAAACAGCAGTCTCATCTGGAGCAGAGTATTCAACAATT 203092 Query 116488 TCCGTACACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTA 116547 || |||||||| || ||| || |||||||||||||| || || || ||||| Sbjct 203091 TCACAGCACAAATTAGATGACTTGATAACACCCAAGTTCTTTTGGTTGGATTTCCTGTTA 203032 Query 116548 CACGCATCCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCC 116607 || ||||||||||| | | | |||| || || || |||||||| | | | |||| Sbjct 203031 CAAGCATCCTTGTAAACAACAAATGGTGTACCAGTTTCCGTTTGTGCTTCCAAGATAGAG 202972 Query 116608 TTCCATACATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTG 116667 | ||||| | ||| | ||| || | || || || | ||||| || Sbjct 202971 TACCATAATTTTTGGGCCTTGATAGT---CTTACCACGACCTTCTTTTTCGTAACGGGTA 202915 Query 116668 TAGAGGGCCTCAAACTCTTCACC--CACAGCCTCTGAGAGCCCTGGTGCCTTATCT-GGA 116724 || ||||| || || || ||||| |||| | || | || ||||| | | || | ||| Sbjct 202914 TATAGGGCTTCGAATTCATCACCGTAACAGTCACTCA-AG-CCTGG-GGCAGATGTAGGA 202858 Query 116725 CAGAAGAGAGACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAG 116784 |||| | || ||| || || || || ||||||||||| || ||||| | ||| Sbjct 202857 GAGAATAAAGTCCAAGTGCCGTTTTCTTCGACACGCTTCATGAAAAGATCTGGAACCCAT 202798 Query 116785 AGCGCCGAGAAGAGATCCCGACAGCGAGCTTCTTCATCCCCCTGATTGAGACGCAACTCC 116844 || || | ||| | ||| | || |||||| | || ||||| | | || Sbjct 202797 AGAGCAGGGAATAAATCTCTCGCACGGATTTCTTCCTTACCGTGATTCTTTCTAATGTCG 202738 Query 116845 AAAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTG-AC-----CCC 116898 | ||||| | |||||| |||||||| || |||| || | || | | || | | Sbjct 202737 ATGAAGTCGAAGATATCAGCGTGCCATGGCTCCAAATATAGAGCAAAGGCACCAGGTCTC 202678 Query 116899 TTGCGACGACCAGCCTGGTTTACATACCTCGCCGTTGCGTTAAATACGCGAAGCATTGGA 116958 ||| |||| | |||| ||||| | || || ||| || || || | ||| ||| Sbjct 202677 TTG---TTACCACCTTGGTCAACATAACGGGCAGTATTGTTGAAGACACGGATCATAGGA 202621 Query 116959 ATGATACCATCAGATTGGCCATTTGTCCCCCGAATACGAGACTTGTTGGCTCTGACATCG 117018 || | || | ||| || ||||| || ||| ||| | | || | | | | Sbjct 202620 ATTAACCCGTTAGAAGTCCCGTTTGTACCAGCAATGTAAGAGCCGGTTGCACGAATGTTG 202561 Query 117019 TGGATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGTGCGCACTCCGTGAGACTG 117078 ||||| || | ||||||||| || || || || || || || ||| | | | | Sbjct 202560 TGGATATGTAGACCAATACCTCCAGCAGTTTTAGAAATCAAAGCACATTCCTTCAAAGTA 202501 Query 117079 CCGTAGATCCCATCGATCGAGTCACCCTTATTTGCGATGAGGAAGCAGCTCGACATTTGT 117138 |||| || || || || || ||| |||| |||| | | ||| ||| |||||||| Sbjct 202500 TCGTAAATACCTTCAATGGAATCATCCTTCATTGCAACTAAGAAACAGGAGGACATTTGA 202441 Query 117139 GGCCTTGGTGTACCAGCGTTGAAGAGGGTTGG 117170 ||| |||| |||||||||||||| | ||||| Sbjct 202440 GGCTTTGGAGTACCAGCGTTGAATAAAGTTGG 202409 >seq13 Length=283376 Score = 86.0 bits (94), Expect = 8e-12 Identities = 249/376 (66%), Gaps = 8/376 (2%) Strand=Plus/Minus Query 12695 GATCTTACGATCAAAGCGACCTGGGCGGAGGAGGGCGTCGTCAAGGATATCAATGCGGTT 12754 ||||| || || ||||| || ||||| ||||| || ||| ||||| || |||||| Sbjct 13659 GATCTGGCGGTCGAAGCGGCCCGGGCGCAGGAGCGCCGGGTCGAGGATGTCGGGGCGGTT 13600 Query 12755 CGTCGCCGCGATGACAACGATGCCCGTCTCGTTATCGAAGCCATCCATCTCAGTCAAGAG 12814 ||||| ||||||| | || | ||||| | |||||||| |||||||| | ||| Sbjct 13599 GGTCGCGGCGATGAGGATGACGTTCGTCTTGACGTCGAAGCCGTCCATCTCCACGAGGAG 13540 Query 12815 TTGATTGATGGTTTGTTCACGTTCATCATTCGCGGGCATACCA--CCCGCACTGCGTTGC 12872 || |||| || || || || || || | || | ||| || || | ||| || Sbjct 13539 CTGGTTGAGCGTCTGCTCGCGCTCGTCGTGTCCG--CCGCCCATGCCGGCGCCGCGGTGG 13482 Query 12873 TTACCGACGGCGTCAATTTCGTCAATGAAAACGATACACGGTTGA-TTTTCACGGGCAAC 12931 ||||||||||| || ||||| | ||| | ||| | ||| || || || ||| Sbjct 13481 CGGCCGACGGCGTCGATCTCGTCGACGAAGATGAT-CGCGGGCGAGTTCTCCTTGGCCTG 13423 Query 12932 TTCAAAGATATCTCGCACTCTCTTGGCACCGACACCCACAAACATCTCCACAAAATTGGC 12991 | || | || || || | | || ||||| || || |||||||| || || | | Sbjct 13422 GTTGAACAGGTCGCGGACGCGGCTCGCGCCGACGCCGACGAACATCTCGACGAAGTCCGA 13363 Query 12992 GGCGGAACATTG-GATGAAGGGGACGTTGGATTCACCCGCGATGGCTCGGGCGAGGAGGG 13050 | ||| | || | | ||| || ||| | || || |||| ||| || ||||| || | Sbjct 13362 GCCGG-AGATCGAGTAGAACGGCACGCCCGCCTCGCCGGCGACGGCGCGCGCGAGCAGCG 13304 Query 13051 TCTTCCCCGTCCCTGG 13066 |||| ||||| || || Sbjct 13303 TCTTGCCCGTGCCGGG 13288 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613434407370720