Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq8 104 4e-17 >seq8 Length=326064 Score = 104 bits (114), Expect = 4e-17 Identities = 292/443 (66%), Gaps = 8/443 (2%) Strand=Plus/Minus Query 203880 TTCTCAGATAGTACATGCCGGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAG 203939 |||||| ||| ||||| ||||||||||| ||||||| ||| ||||| | ||||| | Sbjct 204035 TTCTCAAATAATACATACCGGTCTTTAGACCCTTCTTCCAGCCGTAGAAATGCATACTTG 203976 Query 203940 ACAGTTTGCTCA-CGTTGGGGTCGGCCATGTGAAT--GTTCAGAGACTGGCTTTGGTCGA 203996 || || | || ||||||| || | |||| |||| ||| || |||||||| Sbjct 203975 TTAGCTTACCCATAGTTGGGGCACGCAA---GAATAAATTCAAAGAGTGAGATTGGTCGA 203919 Query 203997 TGAAAGGCGCCCGATCTGCGGCCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCG 204056 || || || || || || ||||| || || || ||||| || ||||| ||||| || | Sbjct 203918 TGTAAATGGCACGGTCGGCTGCCATGTTAATGATTGTCTTTTGTGAAATTTCCCAAACAG 203859 Query 204057 TCTTGAACACGTCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTG-ATCGAGCCGTTG 204115 | || ||| ||| | | ||| ||||||| || | | || || || || || Sbjct 203858 TTTTATACAAATCTTTCAATTCTTGTGGCACAT-TTGGTAAACCTTGAATGGAACCATTT 203800 Query 204116 TCGGCCATCAGTCTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGC 204175 | | || || | || | | || |||| || ||||| || || || ||| Sbjct 203799 TGTGTGATTAGATATTGCTTCATACCATCATCCCAAATACCCAAATCGACCAAATCACGC 203740 Query 204176 ACCAGGTGGGGGTTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTG 204235 | || || || |||| || ||||| || || || || || | || | ||| |||| Sbjct 203739 AACAAGTATGGATTGACGACTTGAAATTCACCAGATAGGACACGACGAGAATACATGTTG 203680 Query 204236 TTGGTGAATGGTTCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGC 204295 || | ||||||||| |||||||| || || ||||||| ||| || || ||| Sbjct 203679 GAAGTAACTGGTTCGAAACACTCGTTGTAACCTAAGATCTGAGATGTGGATGCAGTAGGC 203620 Query 204296 ATGGGAGCCAGGAGCAGGGAGTT 204318 || || |||| | || ||||| Sbjct 203619 ATAGGTGCCATGGTCAAAGAGTT 203597 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795060854835520