Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq4 102 6e-17 >seq4 Length=403504 Score = 102 bits (112), Expect = 6e-17 Identities = 153/214 (71%), Gaps = 4/214 (2%) Strand=Plus/Minus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || ||||| |||| |||| || ||||| || ||||| || | |||| | | || Sbjct 387429 AGGACCAAGTGCAGAGTGGACTCCTTTTGAATGTTATAGTCCGACAAAGTTCTGCCGTCT 387370 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 |||| ||| || ||| ||||||| || | ||| || |||| || | ||| ||||| || Sbjct 387369 TCCAGTTGCTTACCGGCAAAAATCAACCTCTGTTGGTCCGGAGGAATGCCCTCTTTATCC 387310 Query 39628 CATATTTTT-TGTTTA-ATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTG 39685 ||| || | |||| || |||| | ||||| | | || || ||||||||||| | Sbjct 387309 TGTATCTTACTCTTTACATTGTCGATC--GTGTCGGAGGACTCGACCTCCAAAGTAATGG 387252 Query 39686 TTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | ||||| |||||||| || ||||| |||||||| Sbjct 387251 TCTTACCGGTTAAAGTCTTGACGAAAATCTGCAT 387218 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 347329414982036