Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_016655.1 Length=51342 Score E Sequences producing significant alignments: (Bits) Value seq13 149 2e-31 seq6689 134 5e-27 >seq13 Length=283376 Score = 149 bits (164), Expect = 2e-31 Identities = 215/302 (71%), Gaps = 6/302 (2%) Strand=Plus/Plus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 |||||||||||||||||| |||||| | |||||||| ||||||||||| |||||| Sbjct 138818 TGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCG 138877 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCATC 24953 ||||||||||| ||| | |||| | ||| ||| || |||||||||| ||| | Sbjct 138878 TACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGACTTCGTG 138937 Query 24954 TGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAACTG 25013 |||||||| |||||||| ||| | || |||||||||||||||| | ||| || || Sbjct 138938 TGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAGCAGCTC 138997 Query 25014 TCGCGC---ACGCACACGGGCTATCCGTGGCTGGCGCTGAATCACCGCGACTCGATCTTC 25070 ||||| || || || || ||| |||| || | ||||||||||||| | Sbjct 138998 ACGCGCGAGCCGTACCCG---TACCCGACGCTGCGCCTCGCGCCCCGCGACTCGATCGAC 139054 Query 25071 GAGTACACCGCCGACGACGTCATATTCCTCGGCTACCGGCCGCACCCGGTCATCAAGGCC 25130 | ||| ||| ||| || || |||| |||| || |||||| |||||||| Sbjct 139055 GCCTACGAGTACGAGGACATCGAGGTCGTCGGGTACCAGCACCACCCGACGATCAAGGCG 139114 Query 25131 CC 25132 || Sbjct 139115 CC 139116 >seq6689 Length=433 Score = 134 bits (148), Expect = 5e-27 Identities = 137/179 (77%), Gaps = 0/179 (0%) Strand=Plus/Plus Query 24834 TGCCAGCTCTACCAGCGCAGCGCGGACGTATTCCTCGGCGTGCCGTTCAATATCGCGAGC 24893 |||||||||||||||||| |||||| | |||||||| ||||||||||| |||||| Sbjct 177 TGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCG 236 Query 24894 TACGCGCTGCTGACCCATTTCTTCGCGGACCAGCTCGGACTGAAGGTCGGCGAATTCATC 24953 ||||||||||| ||| | |||| ||| ||| || |||||||||| ||| | Sbjct 237 TACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGACTTCGTG 296 Query 24954 TGGACCGGCGGCGACGTCCACCTGTATTCGAACCACGTCGAGCAGGCGACCGAACAACT 25012 |||||||| |||||||| ||| | || |||||||||||||||| | ||| || || Sbjct 297 TGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGGTGCGCGAGCAGCT 355 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 164154294852416