Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_016762.1 Length=49135 Score E Sequences producing significant alignments: (Bits) Value seq1 84.2 7e-12 >seq1 Length=1297082 Score = 84.2 bits (92), Expect = 7e-12 Identities = 203/303 (67%), Gaps = 11/303 (4%) Strand=Plus/Plus Query 21158 CGGGCCCTGGCCCGGCGTCACAAGCAGCGCCATGGGTTGAGCCTGCTGGTGGTGGACTAC 21217 |||||| | ||| || | ||||||||| || | ||| || | || | |||||| Sbjct 1129166 CGGGCCAAGTGCCGTCGGCTCAAGCAGCGGCACGACCTGAAGCTCGTCGTCATCGACTAC 1129225 Query 21218 CTGCAGCTGCTGGAGAGCTCCGGCAAG----TCCACTCGCACCG--AGGACGTCAGCGAC 21271 || ||||| || |||||||||||| || | |||| || |||| ||| || Sbjct 1129226 CTCCAGCTCATG---AGCTCCGGCAAGCGCGTCGAGTCGCGCCAGCAGGAGGTCTCGGAG 1129282 Query 21272 ATGTCCCGCCAGTGCAAGCTGCTGGCGATGGAGCTTGGTATCCCCGTGATCGTGCTGTCG 21331 | || || | |||||||||||||| |||||| | | || || |||| | | ||| Sbjct 1129283 TTCTCGCGTGCGCTCAAGCTGCTGGCGAAGGAGCTCGAGGTTCCTGTCATCGCGATCTCG 1129342 Query 21332 CAGCTCAACCGCTCCCTGGAGCAGCG-GCCGAACAAGCGACCGATGATGTCGGACCTGCG 21390 ||||| ||||| | ||||||||| | || ||||| ||| |||| || || || Sbjct 1129343 CAGCTGAACCGTGGTCCGGAGCAGCGTGGCG-ACAAGAAGCCGCAGATGAGCGATCTTCG 1129401 Query 21391 CGAGTCCGGGGCGATCGAGCAGGACGCCGATGTGATCATGTTCGTGTACCGCGACGAGGT 21450 || ||| | ||||||||||| || || || | || | || ||||||| || | Sbjct 1129402 TGAAAGTGGGTCTATCGAGCAGGATGCTGACGTCGTGATCCTTTTGCACCGCGAAGACGC 1129461 Query 21451 CTA 21453 ||| Sbjct 1129462 CTA 1129464 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157092690908488