Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_018848.1 Length=37612 Score E Sequences producing significant alignments: (Bits) Value seq1 96.9 8e-16 >seq1 Length=1297082 Score = 96.9 bits (106), Expect = 8e-16 Identities = 182/268 (68%), Gaps = 0/268 (0%) Strand=Plus/Plus Query 30169 ATGGCCGGAGACACCCCGATCACCGTTGTGGGCAACGTCGTTGCCGACCCCGAACTCAGG 30228 ||||| || |||||| ||||| || | || ||| || | ||||| || || | Sbjct 1125010 ATGGCAGGTGACACCGTCATCACGGTGATCGGGAACCTCACGGGAGACCCGGAGCTGCGT 1125069 Query 30229 TTCACCCCCGCCGGCGCCGCCGTCGCGAACTTCCGGCTCGCCTCGACCCCCCGCACGTTC 30288 ||||||||| | || || || || || |||||| | | || || || || || || ||| Sbjct 1125070 TTCACCCCCTCGGGTGCGGCGGTGGCCAACTTCACGGTGGCGTCCACGCCGCGGACCTTC 1125129 Query 30289 GACCGCACCGCCAACGAATGGCGAGACGGCGAGACCCTGTTCCTGTCCGTCTCCGTATGG 30348 |||||| | ||||| ||| ||||| || ||||||||| || | ||| | ||| Sbjct 1125130 GACCGCCAGTCGAACGAGTGGAAGGACGGGGACACCCTGTTCATGCGCTGCTCGATCTGG 1125189 Query 30349 CGCCAGCAGGCCGAGAACGTCGCCGGATCCATCCACCGCGGCGACCGCGTGATCGTCGTC 30408 ||| || || ||||||||||| | || | ||| ||||| ||||| Sbjct 1125190 CGCGAGGCCGCGGAGAACGTCGCGGAGTCGCTGACGAAGGGCATGCGCGTCATCGTGCAG 1125249 Query 30409 GGCACCCTCGCCCAGCGCACGTACGAGA 30436 ||| ||||| ||||||| ||||||||| Sbjct 1125250 GGCCGCCTCGTCCAGCGCTCGTACGAGA 1125277 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 120223247208496