Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_019405.1 Length=215710 Score E Sequences producing significant alignments: (Bits) Value seq6 224 1e-53 >seq6 Length=371824 Score = 224 bits (248), Expect = 1e-53 Identities = 342/481 (71%), Gaps = 27/481 (6%) Strand=Plus/Minus Query 136646 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 136705 ||||||| |||||||||| | |||| | ||||| || |||||||| ||||| Sbjct 99392 AGCCCTTGACGCAGAGGAGCGTCGTGAGCCGGGCGACGACCTCGACGAGGTCGGACTGGG 99333 Query 136706 CCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGT 136765 | | |||| |||||| |||||||||||| |||||| ||||||| ||| || |||| Sbjct 99332 CGCGGACGACCTCGTCGAGGTCCTTGTAGGCGGCCGGGATCTCGTCGAGCACCCCGGCGT 99273 Query 136766 CCTTGCGGCACTCCACGCC------CTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGG 136819 ||||||||||||||||||| || || ||| || |||| || || ||||||| Sbjct 99272 CCTTGCGGCACTCCACGCCGGTCGTCTGGGCGGC---GA---GGTCGTCGAGCGTGAAGG 99219 Query 136820 TCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACG 136879 || ||| |||| || |||||||| |||||||| |||||||| ||| ||| ||| Sbjct 99218 TCTTCTTCGCCTTCGTGCGCGACATGCGACGGCCCGCACCGTGCGACGCCGACCAGTACG 99159 Query 136880 AGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGA 136939 | |||| || || |||||||||||||| || || ||||| || || ||||||| Sbjct 99158 ACTCCGGGTTCCCGAGCCCGCGCACGATGTACGAGCCGGTGCCCATGGACCCCGGGATGA 99099 Query 136940 TCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT--- 136996 ||||| | | ||||| ||| | |||||||||||||||||||| || | || Sbjct 99098 GCCCGAGGTCGCCCTTCCCGGCCCGGATCGCGCCCTTGCGGGTCACGACGAGCTCCTGGC 99039 Query 136997 CGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCG 137056 |||||| ||| || | |||||||||||||||| |||||| || || | | || Sbjct 99038 CGTCGACGTG---CTCGACCGCGACGTAGTTGTGGTGGACGTTCACGGCCTCGTCGAACG 98982 Query 137057 ---TCTTGAACGGCGGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCA 137113 ||| | |||| | || |||||| |||| ||| || |||| || | |||||| Sbjct 98981 CGATCTCG--CGGCCG-GGGAACGACGCGCGCACGGCGTC---GACCACGAGCGTCATCA 98928 Query 137114 T 137114 | Sbjct 98927 T 98927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 690062114414400