Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_019406.1
Length=279967
Score E
Sequences producing significant alignments: (Bits) Value
seq6 159 6e-34
seq9491 87.8 3e-12
seq2 84.2 4e-11
>seq6
Length=371824
Score = 159 bits (176), Expect = 6e-34
Identities = 283/406 (70%), Gaps = 10/406 (2%)
Strand=Plus/Minus
Query 168273 CCCTTGACGCACAACACCTGCTTGAGGGTGGCGACGATCTCCACCATTTCTTCCTGGGCC 168332
||||||||||| | | | | |||| |||||||| ||| || | || ||||||
Sbjct 99390 CCCTTGACGCAGAGGAGCGTCGTGAGCCGGGCGACGACCTCGACGAGGTCGGACTGGGC- 99332
Query 168333 GCCATGACGAGTTCGATCGG----CTTGTAAGCCTTCGGCGTCTCGTCGATCACGCCTTC 168388
|| ||||| ||| ||| |||||| || ||| ||||||||| ||| || |
Sbjct 99331 GCG--GACGACCTCG-TCGAGGTCCTTGTAGGCGGCCGGGATCTCGTCGAGCACCCCGGC 99275
Query 168389 GTCCTTGCGGCACTCGACGCCCTTCGTGGCTTCGACGTGCTCGTCCAGGGAGACGAGCTT 168448
||||||||||||||| ||||| |||| || || | ||||| || | || | |||
Sbjct 99274 GTCCTTGCGGCACTCCACGCCGGTCGTCTGGGCGGCGAGGTCGTCGAGCGTGAAGGTCTT 99215
Query 168449 CTTCGCCGCCGAACGCGACATGACGCGGCCGGCGCCGTG-GCTGCACGAGCAGAAGGCGT 168507
||||||| || ||||||||| ||||| || ||||| | || ||| ||| | | |
Sbjct 99214 CTTCGCCTTCGTGCGCGACATGCGACGGCCCGCACCGTGCGACGC-CGACCAGTACGACT 99156
Query 168508 CAGCGTGGCCCTTGCCGCGCACGATGAACGACTTGGCGCCCATCGAACCCGGAATGATGC 168567
| | || || |||||||||||| |||| || |||||| || ||||| |||| |
Sbjct 99155 CCGGGTTCCCGAGCCCGCGCACGATGTACGAGCCGGTGCCCATGGACCCCGGGATGAGCC 99096
Query 168568 CGAGTTCGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGATGTCCTCGCCGA 168627
|||| ||| ||||| ||| | |||||||||||||||||||| || |||| ||||
Sbjct 99095 CGAGGTCGCCCTTCCCGGCCCGGATCGCGCCCTTGCGGGTCACGACGAGCTCCTGGCCGT 99036
Query 168628 AGTGGCGTTCCTTGTTGACGTAGTTGTGGTGACAGTTCACCGCTTC 168673
| | | || ||||||||||||||| |||||| || ||
Sbjct 99035 CGACGTGCTCGACCGCGACGTAGTTGTGGTGGACGTTCACGGCCTC 98990
Score = 102 bits (112), Expect = 1e-16
Identities = 150/210 (71%), Gaps = 2/210 (1%)
Strand=Plus/Minus
Query 139510 CGTGGCGTTGCCCTTGACGAGCAGCCCCAGGGCCTT-ACGCAGGTCCCAGCCATTCAGGT 139568
||| ||||| || |||||||||| || |||||| ||| |||||||| || || | ||
Sbjct 230665 CGTCGCGTTCCCGCGCACGAGCAGCCGCACGGCCTTGACG-AGGTCCCACCCGTTGACGT 230607
Query 139569 CCCAGACACCTTCAATCGGACGCTCGATCACGTCGCGCGGCGTCGTCAGCCCCAGATATT 139628
|| || | || | ||| ||||| ||||||||| ||| | | | || || |
Sbjct 230606 CCAGCACCGCGTCGAGCGGCGTCTCGACGACGTCGCGCCGCGGCCAGGGGTCGAGGTAGT 230547
Query 139629 GCGAGAGCGGGCGAACGTAGAAGAACCGGACGTCGTTGTCGCTATCCGGCGACGGGAAGC 139688
| |||||| ||||| | ||| ||| ||||| ||| |||||||||||||| |
Sbjct 230546 CGGCCTCCGGGCGCACGTACACGAAGCGGCAGTCGTAGTCCGAGTCCGGCGACGGGAACC 230487
Query 139689 CCCAGGCGCGCGAGCCGCTCTCCACCGCGA 139718
||||||| || |||||||||||||||||
Sbjct 230486 CCCAGGCCCGGCTGCCGCTCTCCACCGCGA 230457
Score = 89.7 bits (98), Expect = 9e-13
Identities = 138/194 (71%), Gaps = 5/194 (3%)
Strand=Plus/Minus
Query 169217 GTTGTCCGGCAGTTGCGAAGCAGTCAGCGTGGTGCGCACAGCCATCATGCCGCAGCCGAT 169276
|| ||| ||||| | | || || || | ||||| || | ||||| ||||| |||||
Sbjct 98461 GTCGTCGGGCAGGTCCTCCGCCGTGAGGGACGTGCGGACGCCGATCATCCCGCACCCGAT 98402
Query 169277 GTCGACGCCGACCGCGTACGGGATCACCGCATCCTTGGTCGGGATCACCGAACCAACGGC 169336
|||||||||||| |||| || ||| || || ||| ||| ||||| || ||||
Sbjct 98401 GTCGACGCCGACGGCGTTGGGCGACACGGCGTCGCGCATCGCGATGACCGAGCCGACGGT 98342
Query 169337 TGCGCCGTACCCGGCGTGGACGTCGGGCATCAC-CGCGACGTGCTTGAACACGAACGGCA 169395
||||| | || ||||||||||||||| || ||| ||| || | || ||||||
Sbjct 98341 CGCGCCCTTGCCCAGGTGGACGTCGGGCATGACGCGC-ACGCCCTCG---ACCCACGGCA 98286
Query 169396 GCCCGGCGACGTTG 169409
|| |||||| ||||
Sbjct 98285 GCGCGGCGATGTTG 98272
>seq9491
Length=867449
Score = 87.8 bits (96), Expect = 3e-12
Identities = 66/75 (88%), Gaps = 2/75 (3%)
Strand=Plus/Minus
Query 61664 GTGTGGCGCAGTTTGGTAGCGCGCTT-GCTCGGGATGCAAGAGGTCGCAGGTTCAAATCC 61722
||||||||||| |||||||||||||| | |||||| | ||||||||||||||||||||||
Sbjct 798024 GTGTGGCGCAGCTTGGTAGCGCGCTTCGTTCGGGACG-AAGAGGTCGCAGGTTCAAATCC 797966
Query 61723 TGCTACACTGACCAG 61737
|| || | ||||||
Sbjct 797965 TGTCACCCCGACCAG 797951
>seq2
Length=464139
Score = 84.2 bits (92), Expect = 4e-11
Identities = 63/74 (85%), Gaps = 0/74 (0%)
Strand=Plus/Plus
Query 132960 GATGCGGGGTGGAGCAGTCCGGTAGCTCGTTTGGCTCATAACCAAAAGGTCGAGGGTTCA 133019
|| |||||||||||||| |||||||||| | ||||||||||| | |||||| ||||||
Sbjct 264227 GACGCGGGGTGGAGCAGCTCGGTAGCTCGCTGGGCTCATAACCCAGAGGTCGCAGGTTCA 264286
Query 133020 AATCCCTCCCCCGC 133033
||||| |||||||
Sbjct 264287 AATCCTGCCCCCGC 264300
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 895660117316640
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |