Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_019407.1 Length=218929 Score E Sequences producing significant alignments: (Bits) Value seq6 221 2e-52 >seq6 Length=371824 Score = 221 bits (244), Expect = 2e-52 Identities = 341/481 (71%), Gaps = 27/481 (6%) Strand=Plus/Minus Query 135406 AGCCCTTCACGCAGAGGACTTGCTTGAGGGTGTGGACGATGTCCACGAGGTCCTTCTGGG 135465 ||||||| |||||||||| | |||| | ||||| || |||||||| ||||| Sbjct 99392 AGCCCTTGACGCAGAGGAGCGTCGTGAGCCGGGCGACGACCTCGACGAGGTCGGACTGGG 99333 Query 135466 CCTCCATGACCGCGTCGATGTCCTTGTAGGCCATCGGGATTTCGTCGATCACGCCAGCGT 135525 | | |||| |||||| |||||||||||| |||||| ||||||| ||| || |||| Sbjct 99332 CGCGGACGACCTCGTCGAGGTCCTTGTAGGCGGCCGGGATCTCGTCGAGCACCCCGGCGT 99273 Query 135526 CCTTACGGCACTCCACGCC------CTCGGTGGCCTTGATCTGGTCCTCCAGGGTGAAGG 135579 |||| |||||||||||||| || || ||| || |||| || || ||||||| Sbjct 99272 CCTTGCGGCACTCCACGCCGGTCGTCTGGGCGGC---GA---GGTCGTCGAGCGTGAAGG 99219 Query 135580 TCGCCTTGGCCTGGGTCCGCGACATCGTCCGGCCCGCGCCGTGCGAGCACGAGCAGAACG 135639 || ||| |||| || |||||||| |||||||| |||||||| ||| ||| ||| Sbjct 99218 TCTTCTTCGCCTTCGTGCGCGACATGCGACGGCCCGCACCGTGCGACGCCGACCAGTACG 99159 Query 135640 AGTCCGCATTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGA 135699 | |||| || || |||||||||||||| || || ||||| || || ||||||| Sbjct 99158 ACTCCGGGTTCCCGAGCCCGCGCACGATGTACGAGCCGGTGCCCATGGACCCCGGGATGA 99099 Query 135700 TCCCGAACTGGTCCTTCTGCGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT--- 135756 ||||| | | ||||| ||| | |||||||||||||||||||| || | || Sbjct 99098 GCCCGAGGTCGCCCTTCCCGGCCCGGATCGCGCCCTTGCGGGTCACGACGAGCTCCTGGC 99039 Query 135757 CGTCGAAGTGGAATTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCG 135816 |||||| ||| || | |||||||||||||||| |||||| || || | | || Sbjct 99038 CGTCGACGTG---CTCGACCGCGACGTAGTTGTGGTGGACGTTCACGGCCTCGTCGAACG 98982 Query 135817 ---TCTTGAACGGCGGCAGGCCCGACGCCCGCATGGCCTCCAGGACCCGGACCATCATCA 135873 ||| | |||| | || |||||| |||| ||| || |||| || | |||||| Sbjct 98981 CGATCTCG--CGGCCG-GGGAACGACGCGCGCACGGCGTC---GACCACGAGCGTCATCA 98928 Query 135874 T 135874 | Sbjct 98927 T 98927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 700361692224480