Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_019408.1 Length=223720 Score E Sequences producing significant alignments: (Bits) Value seq6 134 2e-26 >seq6 Length=371824 Score = 134 bits (148), Expect = 2e-26 Identities = 246/354 (69%), Gaps = 21/354 (6%) Strand=Plus/Minus Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCT---GGTCTTCCAGCGTGAAGGCGGCCTT 139561 ||||||||| ||||| ||||| || | |||| || |||||||||| ||| Sbjct 99268 GCGGCACTCCACGCC---GGTCGTCTGGGCGGCGAGGTCGTCGAGCGTGAAGGTCTTCTT 99212 Query 139562 GGCGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGC 139621 || |||||||||||| || ||||| |||||||| ||| ||| |||| || | Sbjct 99211 CGCCTTCGTGCGCGACATGCGACGGCCCGCACCGTGCGACGCCGACCAGTACGACTCCGG 99152 Query 139622 GTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAA 139681 ||| || |||||||||||||| || || ||||| || || ||||||| |||| Sbjct 99151 GTTCCCGAGCCCGCGCACGATGTACGAGCCGGTGCCCATGGACCCCGGGATGAGCCCGAG 99092 Query 139682 CTGGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT---CGTCGAA 139738 | | ||||| ||| | |||||||||||||||||||| || | || |||||| Sbjct 99091 GTCGCCCTTCCCGGCCCGGATCGCGCCCTTGCGGGTCACGACGAGCTCCTGGCCGTCGAC 99032 Query 139739 GTGGAACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCG---TCTT 139795 ||| ||| | |||||||||||||||| |||||| || || | | || ||| Sbjct 99031 GTG---CTCGACCGCGACGTAGTTGTGGTGGACGTTCACGGCCTCGTCGAACGCGATCTC 98975 Query 139796 GAAGGGCGGCAGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCAT 139849 | || ||| || ||| ||||||| |||||| |||| || | ||||||| Sbjct 98974 G-CGGCCGG--GGAACGACGCGCGCACGGCGTC---GACCACGAGCGTCATCAT 98927 Score = 120 bits (132), Expect = 4e-22 Identities = 185/262 (71%), Gaps = 3/262 (1%) Strand=Plus/Minus Query 140274 GGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCGAGGCTGTCGGGCAGGTCCGAGGCC 140333 |||| ||| |||||| ||| ||| | | ||||| ||||||||||||| ||| Sbjct 98499 GGGATCGCGGCCTCGATGCGCGCGCGGACCGGTCCGAGGTCGTCGGGCAGGTCCTCCGCC 98440 Query 140334 TTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGGG 140393 | || || ||||| ||| | ||||| ||||| |||||||| ||||| ||||| || Sbjct 98439 GTGAGGGACGTGCGGACGCCGATCATCCCGCACCCGATGTCGACGCCGACGGCGTTGGGC 98380 Query 140394 ATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGATGCCCATGTGGACG 140453 | |||| | ||| ||| |||||||| ||||||| ||| |||||| ||||||| Sbjct 98379 GACACGGCGTCGCGCATCGCGATGACCGAGCCGACGGTCGCGCCCTTGCCCAGGTGGACG 98320 Query 140454 TCCGGCATCAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCGAGGTTGTGCGCCTGC 140513 || ||||| | | | || || | || ||||||| ||||||| |||| || |||| Sbjct 98319 TCGGGCATGACG--CGCACGC-CCTCGACCCACGGCAGCGCGGCGATGTTGCGCAGCTGC 98263 Query 140514 ACCTGGGCGGGCTGCTCGAAGG 140535 | | |||| | |||||| || Sbjct 98262 TGCAGCGCGGCCGGCTCGACGG 98241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 715691073177600