Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015-
12-30] 9,492 sequences; 32,325,519 total letters
Query= NC_019408.1
Length=223720
Score E
Sequences producing significant alignments: (Bits) Value
seq6 134 2e-26
>seq6
Length=371824
Score = 134 bits (148), Expect = 2e-26
Identities = 246/354 (69%), Gaps = 21/354 (6%)
Strand=Plus/Minus
Query 139505 GCGGCACTCGACGCCTTCGGTCGCCTTGATCT---GGTCTTCCAGCGTGAAGGCGGCCTT 139561
||||||||| ||||| ||||| || | |||| || |||||||||| |||
Sbjct 99268 GCGGCACTCCACGCC---GGTCGTCTGGGCGGCGAGGTCGTCGAGCGTGAAGGTCTTCTT 99212
Query 139562 GGCGGCGGTGCGCGACATGGTCCGCCCCGCGCCGTGCGAGCACGAGCAGAACGAGTCGGC 139621
|| |||||||||||| || ||||| |||||||| ||| ||| |||| || |
Sbjct 99211 CGCCTTCGTGCGCGACATGCGACGGCCCGCACCGTGCGACGCCGACCAGTACGACTCCGG 99152
Query 139622 GTTGCCCTTGCCGCGCACGATGTAGGACTTGGCCCCCATCGAGCCGGGGATGATGCCGAA 139681
||| || |||||||||||||| || || ||||| || || ||||||| ||||
Sbjct 99151 GTTCCCGAGCCCGCGCACGATGTACGAGCCGGTGCCCATGGACCCCGGGATGAGCCCGAG 99092
Query 139682 CTGGTCCTTCTGAGCCGACACCGCGCCCTTGCGGGTCACGAAGACCCACT---CGTCGAA 139738
| | ||||| ||| | |||||||||||||||||||| || | || ||||||
Sbjct 99091 GTCGCCCTTCCCGGCCCGGATCGCGCCCTTGCGGGTCACGACGAGCTCCTGGCCGTCGAC 99032
Query 139739 GTGGAACTCCTTCTGGACGTAGTTGTGGTGGCAGTTCACCGCTTCCTTGTCCG---TCTT 139795
||| ||| | |||||||||||||||| |||||| || || | | || |||
Sbjct 99031 GTG---CTCGACCGCGACGTAGTTGTGGTGGACGTTCACGGCCTCGTCGAACGCGATCTC 98975
Query 139796 GAAGGGCGGCAGGCCCGAGGCGCGCATGGCGTCCAGGACCCGGATCATCATCAT 139849
| || ||| || ||| ||||||| |||||| |||| || | |||||||
Sbjct 98974 G-CGGCCGG--GGAACGACGCGCGCACGGCGTC---GACCACGAGCGTCATCAT 98927
Score = 120 bits (132), Expect = 4e-22
Identities = 185/262 (71%), Gaps = 3/262 (1%)
Strand=Plus/Minus
Query 140274 GGGACGGCGTGCTCGATCAGCGAGCGCAGCTTGGCGAGGCTGTCGGGCAGGTCCGAGGCC 140333
|||| ||| |||||| ||| ||| | | ||||| ||||||||||||| |||
Sbjct 98499 GGGATCGCGGCCTCGATGCGCGCGCGGACCGGTCCGAGGTCGTCGGGCAGGTCCTCCGCC 98440
Query 140334 TTCAGCGAGGTGCGCACGGCCATCATGCCGCAGCCGATGTCCACGCCCACGGCCGCCGGG 140393
| || || ||||| ||| | ||||| ||||| |||||||| ||||| ||||| ||
Sbjct 98439 GTGAGGGACGTGCGGACGCCGATCATCCCGCACCCGATGTCGACGCCGACGGCGTTGGGC 98380
Query 140394 ATGATGGCGCCCTTGGTCGGGATCACCGAGCCCACGGTCGAGCCGATGCCCATGTGGACG 140453
| |||| | ||| ||| |||||||| ||||||| ||| |||||| |||||||
Sbjct 98379 GACACGGCGTCGCGCATCGCGATGACCGAGCCGACGGTCGCGCCCTTGCCCAGGTGGACG 98320
Query 140454 TCCGGCATCAGGGCCACATGCGAGTGGATGAACGGCAGGGCGGCGAGGTTGTGCGCCTGC 140513
|| ||||| | | | || || | || ||||||| ||||||| |||| || ||||
Sbjct 98319 TCGGGCATGACG--CGCACGC-CCTCGACCCACGGCAGCGCGGCGATGTTGCGCAGCTGC 98263
Query 140514 ACCTGGGCGGGCTGCTCGAAGG 140535
| | |||| | |||||| ||
Sbjct 98262 TGCAGCGCGGCCGGCTCGACGG 98241
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 715691073177600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |