Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_019544.1 Length=49335 Score E Sequences producing significant alignments: (Bits) Value seq13 168 2e-37 >seq13 Length=283376 Score = 168 bits (186), Expect = 2e-37 Identities = 403/608 (66%), Gaps = 6/608 (1%) Strand=Plus/Plus Query 45521 GTGTTCGGCCGTCAGCTGCGCTTTAACTTGCAGGACGGATTCCCGCTCGTGACGACGAAA 45580 ||||||||||| ||||| ||||| || | | | || ||||||||| | |||||||| Sbjct 138422 GTGTTCGGCCGCCAGCTCCGCTTCGACCTCGCGCAGGGCTTCCCGCTCATCACGACGAAG 138481 Query 45581 AAGTTGCATATCCGCTCGATCATTTATGAACTGCTCTGGTTTTTAAAAGGCGATACGAAT 45640 |||| || || || || || ||||| ||||| | ||||| |||| Sbjct 138482 CGCGTGCACCTCAAGTCCGTCGCCTACGAGCTGCTGTGGTTCCTGCGCGGCGACTCGAAC 138541 Query 45641 GTTCGCTATTTGCAGGAGAATGGTGTGACGATTTGGGACGAGTGGGCCGATGAAAACGGC 45700 || |||| | |||||| || ||| || ||||||||||||||||| | ||||| Sbjct 138542 GTGCGCTGGCTCCAGGAGCGCGGCGTGCGCATCTGGGACGAGTGGGCCGACGCCGACGGC 138601 Query 45701 GATCTCGGCCCAATCTACGGCGCGCAATGGCGGTCGTGGAAAGGGGCTGACGGGAAAACG 45760 || |||||||| ||||||||| || ||||| |||||| | | ||||| Sbjct 138602 GAGCTCGGCCCCGTCTACGGCGTCCAGTGGCGCTCGTGGCCGACGCCGGACGGCCGCCAC 138661 Query 45761 GTCGACCAAATTGCGGCGGTCTTTAAGGAAATCAAGCGCAACCCGAACTCGCGGCGGTTG 45820 |||||||| | ||| ||| | || | |||| | ||||| ||||||| ||| Sbjct 138662 GTCGACCAGGTCGCGCAGGTGATCGAGCAGATCAGGGCGAACCCCGACTCGCGACGGCAC 138721 Query 45821 CTTGTGAGCGCGTGGAACGTGGCAAAGTTGGGGGAAATGAAGTTGCCCCCATGTCATTAC 45880 | || |||||||||||| | || | | ||| ||| | |||| || || | || Sbjct 138722 ATCGTCTCCGCGTGGAACGTCGGGGAGATCGAGGACATGGCGCTGCCGCCGTGCC---AC 138778 Query 45881 GC---CTTTCAGTTTTACGTCGCGAATGGCCGGTTGTCATGCATGTGGCAACAGCGTTCT 45937 || ||| ||||| ||||| || | |||||| | || ||| | | ||||| || Sbjct 138779 GCGTTCTTCCAGTTCTACGTGGCCGACGGCCGGCTCTCGTGCCAGCTCTACCAGCGCTCG 138838 Query 45938 GTCGATACATTTCTAGGATTGCCGTTTAACATCGCTAGCTATGCGCTGTTGACACATATG 45997 | || || || || ||||||| |||||||| || |||||| | || ||| Sbjct 138839 GCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCGTCGTACGCGCTGCTCGTCCACATG 138898 Query 45998 GTTGCCCAACAATGCGACCTCGATGTCGGCGAACTCATTTTCACCGGCGGCGACGTCCAT 46057 || ||| || || |||||| |||||||| || | | ||||| |||||||| || Sbjct 138899 GTCGCCGCGCAGACCGGCCTCGAGGTCGGCGACTTCGTGTGGACCGGAGGCGACGTGCAC 138958 Query 46058 TTGTACAAAAATCATCTGGAACAAGCGAAACTGCAGCTGACGCGCGAGCCGCGCCCGCTG 46117 | ||| | || || | || || | | |||||| |||||||||||| |||| Sbjct 138959 ATCTACGACAACCACGTCGAGCAGGTGCGCGAGCAGCTCACGCGCGAGCCGTACCCGTAC 139018 Query 46118 CCGAAGCT 46125 |||| ||| Sbjct 139019 CCGACGCT 139026 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 157732618769288