Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_019929.1 Length=243050 Score E Sequences producing significant alignments: (Bits) Value seq6689 98.7 2e-15 seq13 98.7 2e-15 seq1 87.8 3e-12 >seq6689 Length=433 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 123074 TCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCC 123133 || || ||||| || |||||| || ||| | ||||| || || ||||| ||||| || Sbjct 174 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 233 Query 123134 TCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTC 123193 || |||||||| || | |||||| | ||| |||| || | | || || |||||| Sbjct 234 TCGTACGCGCTGCTCGTCCACATGGTCGCCTCGCAGACCGGCCTCGAGGTCGGCGACTTC 293 Query 123194 GTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGG 123242 |||||||| || || || ||||| | ||| ||||||| | ||||||| Sbjct 294 GTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGG 342 >seq13 Length=283376 Score = 98.7 bits (108), Expect = 2e-15 Identities = 123/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 123074 TCCTGTCAGCTGTATCAGCGCAGTGCTGACATGTTCCTAGGCGTACCGTTTAACATTGCC 123133 || || ||||| || |||||| || ||| | ||||| || || ||||| ||||| || Sbjct 138815 TCGTGCCAGCTCTACCAGCGCTCGGCGGACCTCTTCCTCGGGGTGCCGTTCAACATCGCG 138874 Query 123134 TCTTACGCGCTCCTGATACACATGTTTGCCCAGCAGGCCAATATGGCAGTAGGTGACTTC 123193 || |||||||| || | |||||| | ||| |||| || | | || || |||||| Sbjct 138875 TCGTACGCGCTGCTCGTCCACATGGTCGCCGCGCAGACCGGCCTCGAGGTCGGCGACTTC 138934 Query 123194 GTGTGGACGGGTGGGGATGTGCATCTGTACTCCAACCACCTGGAGCAGG 123242 |||||||| || || || ||||| | ||| ||||||| | ||||||| Sbjct 138935 GTGTGGACCGGAGGCGACGTGCACATCTACGACAACCACGTCGAGCAGG 138983 >seq1 Length=1297082 Score = 87.8 bits (96), Expect = 3e-12 Identities = 59/65 (91%), Gaps = 1/65 (2%) Strand=Plus/Plus Query 169732 TGTAGCTCAGTTGGTCTAGAGTGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCGAGCCCC 169791 |||||| |||||||| ||| | ||||||||||||||||||||||||||||||| || ||| Sbjct 352475 TGTAGCGCAGTTGGT-TAGCGCGCCGCCCTGTCACGGCGGAGGTCGCGGGTTCAAGTCCC 352533 Query 169792 GTCAG 169796 ||||| Sbjct 352534 GTCAG 352538 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 777539733963200