Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Saccharomyces_20pastorianus_20[genbank_20GCA_5F001483345.1_202015- 12-30] 9,492 sequences; 32,325,519 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq38 320 2e-82 seq8 239 5e-58 >seq38 Length=131761 Score = 320 bits (354), Expect = 2e-82 Identities = 915/1389 (66%), Gaps = 42/1389 (3%) Strand=Plus/Plus Query 75227 ATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTCTTGGAGACATACGAC 75286 ||| | |||||| | ||||||||||| ||| || || ||| || || || || || Sbjct 125343 ATGAGAGTCGCACTAGGCATCCACGGTAGAGATATCGAGGCTGCTTTAGAAACGTATAAC 125402 Query 75287 AAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTTCAATGCTGGTACACC 75345 |||||| | || ||| || | |||||| | ||||| | |||||||| ||||| || Sbjct 125403 TTGATGTCTCTAAAATATTTT-ACTCACGCCTCTCCAACGTTGTTCAATGCCGGTACTCC 125461 Query 75346 AAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGACTCAATCAACGGTAT 75405 || ||| || |||||| ||| ||| | | |||| ||||||||||| ||| | || || Sbjct 125462 AAAACCTCAAATGTCCTCTTGTTTCTTGGTTGCCATGAAGGAGGACTCTATCGAGGGGAT 125521 Query 75406 CTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGGGGTATTGGGATGCA 75465 || | || | | ||| ||||| || || || ||||| |||||||| | || Sbjct 125522 TTACGACACCTTGAAGGAATGTGCTTTGATTTCCAAAACTGCTGGTGGTATTGGTCTACA 125581 Query 75466 CATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAATGGTCAATCAGATGG 75525 |||||| | | | | | | ||| ||| || ||||| ||| || | || Sbjct 125582 TATCCATAACATTCGTTCAACTGGTTCTTACATTGCTGGTACAAACGGTACTTCTAACGG 125641 Query 75526 TATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTAAATCAAGCGGGGCG 75585 | | ||||| ||| |||| || || || ||| || || ||||| | || | || Sbjct 125642 TTTAATTCCTATGATTCGTGTTTTCAATAACACTGCCCGTTATGTTGACCAGGGTGGTAA 125701 Query 75586 TCGCAAGG---GGTCCATC-GCGGTCTACTTGGAACCATGGCATGCCGATATCATGGAGT 75641 | ||| ||| | | || | ||| |||||||||||||||| ||||| | || | Sbjct 125702 TAA-AAGACCTGGTGCGTTTGCCCTTTACCTGGAACCATGGCATGCTGATATATTTGATT 125760 Query 75642 TCCTTGAG-TTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAGAGATCTCTTTTCA 75700 | |||| ||| || ||||| ||| | || || ||| |||||| | || | Sbjct 125761 TTATTGATATTAGGAAG-AACCACGGTAAAGAGGAAATTCGTGCAAGAGATTTGTTCCCT 125819 Query 75701 TCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGGTCAATGGTCTCTT 75760 | || |||||||| || |||||||||||||| || || || ||| ||| | | Sbjct 125820 GCTCTATGGATTCCTGATCTTTTCATGAAGCGTGTCGAAGAAAATGGGACCTGGACATTA 125879 Query 75761 TTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGTGAGGAGTTTGAAGCCCT 75819 |||| |||| ||| || || ||| | ||| ||||| |||||||| || || Sbjct 125880 TTCTCTCCA-ACATCAGCTCCTGGTTTAAGCGATTGTTACGGTGACGAGTTTGAGGCTCT 125938 Query 75820 CTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGCCGCCGATGTTTG 75879 || || || || | || ||| | | || |||| | |||| | | || Sbjct 125939 ATATACCCGCTACGAGAAAGAAGGTCGTGGTAA---GACTATCAAAGCCCAAAAATTATG 125995 Query 75880 GAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGCTTTACAAGGATGC 75939 | | | ||| | || | || || || ||||| ||||| | | ||||||||||||| Sbjct 125996 GTATTCCATTTTGGAAGCTCAAACTGAAACTGGTACACCTTTCGTTGTTTACAAGGATGC 126055 Query 75940 TTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCTCAAATCTTTGCAC 75999 |||||||| || ||| ||||| || || || |||||| ||||| | ||| Sbjct 126056 TTGTAACAGAAAATCTAATCAAAAAAACTTAGGTGTCATCAAGTCATCAAACTTATGCTG 126115 Query 76000 GGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTGCAATTTGGCATCAATCGC 76059 |||||| | || ||| ||| | ||||| || |||||||| || ||||| || | || Sbjct 126116 TGAAATTGTTGAATACTCAGCTCCAGATGAAACTGCTGTTTGTAACTTGGCTTCCGTTGC 126175 Query 76060 CCTTCCAAAGTATGTCAATGAAG---------------AGACTCGCACTTTTGATTATGA 76104 | | ||| | || ||| |||| ||||| ||| | | | | Sbjct 126176 CTTACCA--GCAT-TCATTGAAACTTCTGAGGATGGTAAGACTTCCACATACAACTTCAA 126232 Query 76105 AAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAA 76164 |||| | |||||||| | || ||||||| ||| ||||| |||||||||| | || Sbjct 126233 AAAATTACATGAAATTGCTAAAGTTGTTACTCGTAATTTAAACAGAGTCATTGATCGTAA 126292 Query 76165 TTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTGGG 76224 || || || ||||| ||| |||| || |||||| |||| ||||| |||| |||||| Sbjct 126293 TTACTACCCTGTTGAAGAAGCGAGAAAATCCAATATGAGACATAGACCAATTGCTTTGGG 126352 Query 76225 TGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAAGC 76284 ||||||||||||||| || || || ||| || | |||||||||| || ||||| Sbjct 126353 TGTTCAAGGTCTCGCTGACACTTTCATGCTGTTACGTTTGCCATTTGATTCTGAGGAAGC 126412 Query 76285 CAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGTTG 76344 | | | ||| | ||||||||||| || ||||| || ||| |||| || ||| Sbjct 126413 CCGTTTGCTAAATATCCAAATCTTTGAAACTATTTATCATGCCTCCATGGAAGCTTCTTG 126472 Query 76345 TGAATTGGCT--GAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 |||| | ||| |||| | ||| | || || || || | || ||||| || || ||| Sbjct 126473 TGAACTAGCTCAGAAG--GACGGTCCATACGAAACTTTCCAAGGATCTCCTGCTTCTCAA 126530 Query 76403 GGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCAAGCTCAACTACGACTGGGATGTT 76462 || | || ||||||||||||||||| || || | || | || ||||| Sbjct 126531 GGTATACTACAGTTTGATATGTGGGACCAAAAACCCTACGGCATGTGGGATTGGGA-CAC 126589 Query 76463 CTCAAGGAACG-CATCAAGGAGAAGGGTCTTCGTAACAGTCTTT--TGATGGCACCAATG 76519 || ||| || | |||| | || | ||| || | | | || || |||||||||||| Sbjct 126590 CTTAAGAAAAGATATCATGAAGCATGGTATTAG--AAATTCCTTGACCATGGCACCAATG 126647 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || || ||||| | ||||| |||||| |||||||||| || |||||| ||| | Sbjct 126648 CCTACTGCATCCACATCCCAAATATTGGGTTATAATGAATGTTTCGAACCAGTCACTTCC 126707 Query 76580 AACATCTAC 76588 || || ||| Sbjct 126708 AATATGTAC 126716 >seq8 Length=326064 Score = 239 bits (264), Expect = 5e-58 Identities = 897/1385 (65%), Gaps = 40/1385 (3%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 |||||| || | ||||| | ||||| | || || ||||| ||| ||||||| | | Sbjct 202301 CCACAGCACTTAATCATGAGAGTCGCCCTAGGTATTCACGGTGAAAACATTGAGGCCGCT 202360 Query 75272 TTGGAGACATACGACAAGATGTCCC-AAGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 || || || || || ||||| | || || || | ||| || | ||||| | || Sbjct 202361 TTAGAAACCTATAACTTAATGTCTCTAAAATACTTT-ACTCATGCCTCTCCAACTTTATT 202419 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||| |||||||| |||| || || |||||| || ||| | | || | ||||| || Sbjct 202420 CAACGCTGGTACTCCAAAGCCTCAAATGTCCTCCTGTTTCTTAGTTGCAATGAAGGATGA 202479 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 || || | ||||| || | ||| | | ||| ||||| || || || ||||| Sbjct 202480 TTCCATTGAAGGTATTTACGATACTTTGAAGGAATGTGCTTTGATTTCTAAAACTGCTGG 202539 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAA 75510 |||||||| | || ||||| | | | || | ||| ||| || ||||| Sbjct 202540 AGGTATTGGTCTACATATCCACAACATTCGTGCAACCGGCTCTTACATTGCTGGTACAAA 202599 Query 75511 TGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGT 75570 || || | || | ||||| ||| | || || || ||| || || || ||||| Sbjct 202600 CGGGACTTCTAACGGGTTAATTCCTATGATCCGTGTCTTCAACAATACTGCCCGTTATGT 202659 Query 75571 AAATCAAGCGGGGCGTCGCAAGGG-----GT-CCATCGCGGTCTACTTGGAACCATGGCA 75624 | |||| || | |||| | || || | || | || ||||| |||||||| Sbjct 202660 TGACCAAGGTGG---TAACAAGAGACCTGGTGCCTTTGCTCTATATTTGGAGCCATGGCA 202716 Query 75625 TGCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTG 75684 || |||||| | || ||| | || | || || || ||| | ||||| || ||| Sbjct 202717 CGCTGATATCTTCGACTTCATCGACATTAGAAAGAATCACGGTAAGGAAGAAA-TCCGTG 202775 Query 75685 T-AGAGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGG 75743 |||||| | || | | || ||| ||||||| |||||||||||||| || || || Sbjct 202776 CGAGAGATTTATTCCCTGCTCTATGGGTTCCAGATCTTTTCATGAAGCGTGTCGAAGAAA 202835 Query 75744 GTGGTCAATGGTCTCTTTTCTGTCCAGACAAG-GCACCAGGTCTCTCCGACGCGGTGGGT 75802 || ||| || | |||| ||| ||| || ||||| | ||| ||| Sbjct 202836 ACGGCACTTGGACTTTATTCTCTCCT-ACATCTGCCCCAGGCTTGAGTGACTGTTACGGT 202894 Query 75803 GAGGAGTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTA 75862 || || || |||||||| || || || ||| | || ||| | | || |||| | Sbjct 202895 GATGAATTCGAAGCCCTATATACCCGTTACGAAAAAGAAGGTCGTGGTAA---GACTAT- 202950 Query 75863 CCAGCCGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATA 75921 | || | | | || ||| | |||| | || |||| ||||| ||||| ||||||| Sbjct 202951 CAAGGCCCAAAAATTATGGTACTCTATCTTGGAAGCACAAACGGAAACTGGTACACCATT 203010 Query 75922 TATGCTTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAA 75981 | | ||||||||||||||||||||| ||| ||||||||||| ||||| ||||| Sbjct 203011 TGTTGTTTACAAGGATGCTTGTAACAGGAAATCCAACCAAAAGAACTTGGGTGTTATCAA 203070 Query 75982 GAGCTCAAATCTTTGCACGGAAATTTTAGAGTACACAGATAAGGATGAGACGGCTGTTTG 76041 | || ||| | ||| |||||| | || ||| | | | |||||||| |||||||| Sbjct 203071 GTCATCTAATTTGTGCTGTGAAATTGTTGAATACTCTGCTCCAGATGAGACTGCTGTTTG 203130 Query 76042 CAATTTGGCATCAATCGCCCTTCCA--AAGTATGTCAA----TGAAG------AGACTCG 76089 || ||||| || | || | ||| | ||| || ||||| | ||| Sbjct 203131 TAACTTGGCTTCTGTTGCTTTGCCAGCATTTATTGAAACATCTGAAGACGGCAAAACTTC 203190 Query 76090 CACTTTTGATTATGAAAAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCG 76149 || | | | |||| || |||||||| | || || |||| || ||||| Sbjct 203191 TACATACAACTTCAAAAAGCTACATGAAATTTCTAAAGTTATTACTCGTAACTTAAACAA 203250 Query 76150 AGTCATTGACAGAAATTTTTATCCCGTTGAGACTGCGCGAAAGTCTAATATGCGACACAG 76209 || |||||| | || | |||||| || ||| || ||| ||||||||| |||| || Sbjct 203251 CGTTATTGACCGTAACTATTATCCTGTCGAGGAAGCAAGAAGATCTAATATGAGACATAG 203310 Query 76210 ACCTATTGGTTTGGGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATT 76269 || |||| ||||||||| |||||| | || || || || |||| || | |||| Sbjct 203311 GCCGATTGCTTTGGGTGTCCAAGGTTTGGCTGACACTTTCATGTTGTTGCGTTTGCCATT 203370 Query 76270 TGATTCAGATGAAGCCAAGGAGA-TGAATGCTCGTATCTTTGAAACCATGTATCACGCAT 76328 || ||||| |||| || | | | ||| || ||||| ||||| || || || || | Sbjct 203371 CGACTCAGAAGAAG-CACGCTTACTAAATATTCAAATCTTCGAAACTATCTACCATGCCT 203429 Query 76329 CCCTGGAGGCGAGTTGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTT 76388 || |||| || ||||||||| ||| || | || | || || || ||| | || | Sbjct 203430 CCATGGAAGCTTCTTGTGAATTAGCTCAAAGAGATGGCCCATACGAAACCTTTAAAGGCT 203489 Query 76389 CTCCCGCGTCCCAAGGGGTGCTTCAGTTTGATATGTGGGAAGGTGAAACCA-AGCTCAAC 76447 | || || || ||||| | ||||| || || ||||||| | |||||| | | Sbjct 203490 CCCCGGCTTCTCAAGGTATACTTCAATTCGACATGTGGG-ACCAAAAACCATACGGTATG 203548 Query 76448 TACGACTGGGATGTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTT-- 76505 | || ||||| ||| | | ||||| |||| | ||| || | ||| ||||| Sbjct 203549 TGGGATTGGGACACTCTGAGAAATAACATCATGGAGCATGGTATTAGAAAC--TCTTTGA 203606 Query 76506 TGATGGCACCAATGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTG 76565 |||||||| ||||| || || ||||| | || ||||| ||| | || || || || | Sbjct 203607 CCATGGCACCTATGCCTACTGCATCCACATCTCAGATCTTAGGTTACAACGAGTGTTTCG 203666 Query 76566 AACCA 76570 ||||| Sbjct 203667 AACCA 203671 Score = 87.8 bits (96), Expect = 2e-12 Identities = 111/150 (74%), Gaps = 2/150 (1%) Strand=Plus/Minus Query 175276 GGTGCCAAGATCCCCCGAGGCGCCCTTCTCGCGGGTAAGCCAGGTACGGGAAAGACCCTC 175335 || ||||| ||||||||||||||| |||| | || |||||||| || ||||||||| Sbjct 92577 GGCGCCAAAATCCCCCGAGGCGCCATTCTTTCCGGGCCTCCAGGTACCGGTAAGACCCTC 92518 Query 175336 CTCGCCCGAGCCATCGCGGGTGAATCAAATGTCCCATTC-ATCCAGTGCTCTGCCGCAAA 175394 | ||| |||| |||||| || | || || || ||| | | ||| |||| | | Sbjct 92517 TTGGCCAAGGCCACCGCGGGCGAGGCCAACGTGCCCTTCTTTTCCGTG-TCTGGTTCCGA 92459 Query 175395 CTTTGTGGAGATGTTTGTTGGTGTGGGTGC 175424 || ||||| ||||||||||| |||||||| Sbjct 92458 GTTCGTGGAAATGTTTGTTGGGGTGGGTGC 92429 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596498817016960